Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_L11
         (659 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011396-1|AAH11396.2|  661|Homo sapiens pseudouridylate synthas...    60   7e-09
AB067484-1|BAB67790.1|  645|Homo sapiens KIAA1897 protein protein.     60   7e-09
BC068502-1|AAH68502.1|  701|Homo sapiens pseudouridylate synthas...    33   1.2  
BC033621-1|AAH33621.1|  701|Homo sapiens pseudouridylate synthas...    33   1.2  
BC020781-1|AAH20781.1|  373|Homo sapiens Unknown (protein for IM...    33   1.2  
AL136759-1|CAB66693.1|  701|Homo sapiens hypothetical protein pr...    33   1.2  

>BC011396-1|AAH11396.2|  661|Homo sapiens pseudouridylate synthase 7
           homolog (S. cerevisiae) protein.
          Length = 661

 Score = 60.1 bits (139), Expect = 7e-09
 Identities = 25/46 (54%), Positives = 37/46 (80%)
 Frame = +1

Query: 376 ISESEIGITEYISDHKGFIGIIKWRYSDFQVSEINEDGVIAKLTDL 513
           ++E+++GIT+++S H+GF GI+K RYSDF V EI +DG I+ L DL
Sbjct: 109 LTEADVGITKFVSSHQGFSGILKERYSDFVVHEIGKDGRISHLNDL 154


>AB067484-1|BAB67790.1|  645|Homo sapiens KIAA1897 protein protein.
          Length = 645

 Score = 60.1 bits (139), Expect = 7e-09
 Identities = 25/46 (54%), Positives = 37/46 (80%)
 Frame = +1

Query: 376 ISESEIGITEYISDHKGFIGIIKWRYSDFQVSEINEDGVIAKLTDL 513
           ++E+++GIT+++S H+GF GI+K RYSDF V EI +DG I+ L DL
Sbjct: 87  LTEADVGITKFVSSHQGFSGILKERYSDFVVHEIGKDGRISHLNDL 132


>BC068502-1|AAH68502.1|  701|Homo sapiens pseudouridylate synthase 7
           homolog (S. cerevisiae)-like protein.
          Length = 701

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 406 YISDHKGFIGIIKWRYSDFQVSEINEDGVIAKLT 507
           + +DH GF G IK   SDF V EI+E G +   T
Sbjct: 16  FFNDHVGFHGTIKSSPSDFIVIEIDEQGQLVNKT 49


>BC033621-1|AAH33621.1|  701|Homo sapiens pseudouridylate synthase 7
           homolog (S. cerevisiae)-like protein.
          Length = 701

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 406 YISDHKGFIGIIKWRYSDFQVSEINEDGVIAKLT 507
           + +DH GF G IK   SDF V EI+E G +   T
Sbjct: 16  FFNDHVGFHGTIKSSPSDFIVIEIDEQGQLVNKT 49


>BC020781-1|AAH20781.1|  373|Homo sapiens Unknown (protein for
           IMAGE:4719235) protein.
          Length = 373

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 406 YISDHKGFIGIIKWRYSDFQVSEINEDGVIAKLT 507
           + +DH GF G IK   SDF V EI+E G +   T
Sbjct: 16  FFNDHVGFHGTIKSSPSDFIVIEIDEQGQLVNKT 49


>AL136759-1|CAB66693.1|  701|Homo sapiens hypothetical protein
           protein.
          Length = 701

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 406 YISDHKGFIGIIKWRYSDFQVSEINEDGVIAKLT 507
           + +DH GF G IK   SDF V EI+E G +   T
Sbjct: 16  FFNDHVGFHGTIKSSPSDFIVIEIDEQGQLVNKT 49


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,419,835
Number of Sequences: 237096
Number of extensions: 1450754
Number of successful extensions: 2031
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2025
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)