Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_L11
         (659 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069192-1|AAL39337.1|  734|Drosophila melanogaster GH24787p pro...    48   1e-05
AE014296-1465|AAF50409.1|  734|Drosophila melanogaster CG6745-PA...    48   1e-05

>AY069192-1|AAL39337.1|  734|Drosophila melanogaster GH24787p
           protein.
          Length = 734

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
 Frame = +1

Query: 382 ESEIGITEYIS-DHKGFIGIIKWRYSDFQVSEINEDGVIAKLTDL 513
           E+++GITE+ + +  GF GI+K R+SDF V+EI+ +G + +L DL
Sbjct: 50  ETQVGITEFTNPEAPGFTGILKSRFSDFHVNEIDSNGKVLELNDL 94


>AE014296-1465|AAF50409.1|  734|Drosophila melanogaster CG6745-PA
           protein.
          Length = 734

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 21/45 (46%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
 Frame = +1

Query: 382 ESEIGITEYIS-DHKGFIGIIKWRYSDFQVSEINEDGVIAKLTDL 513
           E+++GITE+ + +  GF GI+K R+SDF V+EI+ +G + +L DL
Sbjct: 50  ETQVGITEFTNPEAPGFTGILKSRFSDFHVNEIDSNGKVLELNDL 94


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,110,117
Number of Sequences: 53049
Number of extensions: 427070
Number of successful extensions: 753
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)