Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_L11
         (659 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71178-9|CAA94883.1|  577|Caenorhabditis elegans Hypothetical pr...    31   0.72 
Z83109-9|CAJ43453.1|  371|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z72512-1|CAA96663.2|  326|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AF016428-2|AAO26002.1|  316|Caenorhabditis elegans Serpentine re...    28   5.1  
Z78417-9|CAI70407.1|  700|Caenorhabditis elegans Hypothetical pr...    28   6.8  
U28971-7|ABC48263.1|  309|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z71178-9|CAA94883.1|  577|Caenorhabditis elegans Hypothetical
           protein B0024.11 protein.
          Length = 577

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +1

Query: 382 ESEIGITEYISDH--KGFIGIIKWRYSDFQVSEINEDGVI 495
           E+E G+TEY S+H       ++K  YSDF V EI  D  +
Sbjct: 2   ETEFGLTEYASEHTITPVPCLLKEMYSDFIVQEILADHTV 41


>Z83109-9|CAJ43453.1|  371|Caenorhabditis elegans Hypothetical
           protein F44G3.14 protein.
          Length = 371

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = +3

Query: 84  KQCIRYSVPSKQF*FDCLKNYC-KIGTD--GENKFHF 185
           + CI Y V S+Q  ++C  N+C +IG D  G  +F F
Sbjct: 13  RACILYEVLSRQPIYNCYTNFCNRIGDDVIGYREFEF 49


>Z72512-1|CAA96663.2|  326|Caenorhabditis elegans Hypothetical
           protein R07B5.3 protein.
          Length = 326

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -3

Query: 549 IYNFIFWWFRWLKIC*FRYNAIFIDF*YLKVRVP 448
           I+ FIF  F W++I    +N +FI F Y+ VR+P
Sbjct: 61  IHPFIFRSFIWMQI----WNLVFIFFDYVLVRIP 90


>AF016428-2|AAO26002.1|  316|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 65 protein.
          Length = 316

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = -3

Query: 225 TPIHFSIYIAPNLQNEIYFRRQFLFCSNFLNNQIKIVSTVLSSGCIVFCNLLN 67
           T ++F I+IA  +    YF +Q    S       K ++ +  + CIVF  +L+
Sbjct: 193 TVLYFIIFIALGVMASAYFSKQQQILSTMHETVSKKLTRIAITYCIVFTGVLS 245


>Z78417-9|CAI70407.1|  700|Caenorhabditis elegans Hypothetical
           protein C35C5.11 protein.
          Length = 700

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 612 IPYLHRKNFQVIXIQ*EAFIVIYNFIFWWFRWLKIC*FRYNA-IFI 478
           IP++H  +FQ +     A I+  + I W FRW  +    + A +FI
Sbjct: 486 IPHIHFTSFQQV-----AVIICLSLIIWVFRWFSLSHHHWTARLFI 526


>U28971-7|ABC48263.1|  309|Caenorhabditis elegans Hypothetical
           protein B0244.4 protein.
          Length = 309

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -3

Query: 537 IFWWFRWLKIC*FRYNAIFIDF*YLKVRVPPFNNTNKSFMVTYIF 403
           I +W  +L  C     A F++  YL + VP F   N      YIF
Sbjct: 40  IIFWIDFLIPCTLFVVACFLNAYYLSILVPEFTEMNDITKKQYIF 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,912,658
Number of Sequences: 27780
Number of extensions: 241449
Number of successful extensions: 453
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)