Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_L10
         (874 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    25   0.91 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           25   0.91 
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    24   2.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   2.8  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   8.5  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    22   8.5  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 389 LQPNPTARAKMAAVKGISKLSGQAKSNTYPQPEGV 493
           L+  P  +  + A+KG  K+SG  K   Y   EG+
Sbjct: 19  LEDAPRVKTPLGAIKGYYKISGNGKQ--YEAYEGI 51


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 389 LQPNPTARAKMAAVKGISKLSGQAKSNTYPQPEGV 493
           L+  P  +  + A+KG  K+SG  K   Y   EG+
Sbjct: 19  LEDAPRVKTPLGAIKGYYKISGNGKQ--YEAYEGI 51


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 522 RNLAKILYFHNASSRWE 572
           RN  +ILYFH+ +SR E
Sbjct: 257 RNNDRILYFHSLASRVE 273


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 343 YVCFSFHFHEVQIQFCAFRATHFLCDIL 260
           Y+   + F      +C   ATH +C IL
Sbjct: 347 YIISRYVFRSALEDYCNIVATHLVCGIL 374


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 360 KNCKRKPKSFYNQIQRLERKWQLSRELAN 446
           K+C +   +F   I + +R W L   L N
Sbjct: 117 KDCSKIVSAFKIAIDKFDRLWVLDSGLVN 145


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 558 RHCENIVSSPSFFP*CNM 505
           RH +N+ + PS  P CN+
Sbjct: 20  RHIQNVHTRPSKEPICNI 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,102
Number of Sequences: 438
Number of extensions: 5605
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)