Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_L08
(846 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0980 + 26520832-26520922,26521021-26521409,26521612-265219... 60 2e-09
08_02_0598 - 19149218-19149524,19150325-19150896,19151374-191517... 55 8e-08
10_08_0682 + 19858131-19858230,19858313-19858954,19859041-198600... 52 8e-07
04_04_0862 + 28843654-28844386,28844486-28844895,28844995-288455... 51 1e-06
02_05_0304 + 27721413-27721479,27721561-27722208,27722399-277233... 50 2e-06
09_03_0047 - 11867302-11867356,11867461-11868032,11868485-118688... 50 3e-06
03_01_0127 + 988066-988171,988259-988881,988986-989396,989463-99... 47 2e-05
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321... 31 0.87
07_01_0547 + 4052618-4052659,4055575-4055741,4055839-4056556,405... 31 1.2
10_08_0509 + 18419815-18422150,18422249-18422291,18423154-184234... 30 2.7
05_01_0335 + 2652334-2652340,2652459-2652550,2652642-2653362,265... 30 2.7
03_05_0880 - 28450248-28450458,28451911-28452013,28452135-284522... 30 2.7
02_05_0717 + 31190626-31191234,31191954-31192394,31192699-311928... 29 4.7
07_03_0536 - 19205515-19205686,19205807-19205931,19206428-192065... 29 6.2
07_01_0601 + 4464745-4465010,4465274-4466582 29 6.2
02_05_0568 - 30034280-30034393,30034888-30035163,30035246-300353... 29 6.2
01_07_0255 - 42322111-42322308,42322658-42322750,42323127-423233... 29 6.2
>06_03_0980 +
26520832-26520922,26521021-26521409,26521612-26521927,
26522869-26523769,26524103-26524184
Length = 592
Score = 60.5 bits (140), Expect = 2e-09
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Frame = +2
Query: 386 DSSYDFIIVGGGSAGCVLANRLTEVANWSVLMIEAGDDP---PSIANSPGYSLITSTLLP 556
+ +YD+I+VGGG+AGC LA L VL++E G P P +A + G+ + P
Sbjct: 52 EEAYDYIVVGGGTAGCPLAATLAGPGGGRVLVLERGGAPAEFPPLATAGGFVRTLAMADP 111
Query: 557 NWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRADYDNWAENGNE-GW 733
F+S+ + + R ++LGG++S+N+ FY R + + + E G W
Sbjct: 112 APESDAPAQTFASE----DGVPNVRARVLGGATSINAGFYSRAHPDWFRSHGEGGEAMNW 167
Query: 734 DWNTVIQYFKKSER 775
D V ++ ER
Sbjct: 168 DMKLVNSSYEWVER 181
>08_02_0598 -
19149218-19149524,19150325-19150896,19151374-19151762,
19151850-19152163,19152312-19152356,19153451-19153805,
19154361-19154430
Length = 683
Score = 54.8 bits (126), Expect = 8e-08
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Frame = +2
Query: 374 ANVPDSSYDFIIVGGGSAGCVLANRLTEVANWSVLMIEAGDDPPSIANSPGYSLITSTLL 553
+ + +YD+IIVGGG+AGC LA L++ + VL++E G P Y + L
Sbjct: 43 SRIQHEAYDYIIVGGGTAGCPLAATLSQ--KYKVLLLERGGSP--------YGNRNISHL 92
Query: 554 PNWGYFGVNDDFSSQGQKFKS---IRHTRGKMLGGSSSLNSMFYVRGN 688
N+ +D +S Q F S + + R K+LGG +S+N+ FY R +
Sbjct: 93 ENFHICLADDSPNSPSQGFISTDGVINARAKVLGGGTSVNAGFYSRAD 140
>10_08_0682 +
19858131-19858230,19858313-19858954,19859041-19860016,
19860105-19860147
Length = 586
Score = 51.6 bits (118), Expect = 8e-07
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
Frame = +2
Query: 389 SSYDFIIVGGGSAGCVLANRLTEVANWSVLMIEAGDDPPSIANSPGYSLITSTLLPNWGY 568
SSY++I++GGG+AGC LA L+E + VL++E G P AN T L
Sbjct: 52 SSYNYIVIGGGTAGCPLAATLSEHSR--VLLLERGGLP--YANMSSEQHFTDAL------ 101
Query: 569 FGVNDDFSSQGQKFKS---IRHTRGKMLGGSSSLNSMFYVRGNRADYDNWAENGNEGWDW 739
+ +S Q+F S + + R ++LGG S LN+ FY R + +Y GWD
Sbjct: 102 --ADTSPASPAQRFISEDGVVNARARVLGGGSCLNAGFYTRASN-EYVR-----ASGWDA 153
Query: 740 NTVIQYFKKSER 775
V ++ ER
Sbjct: 154 RLVNSSYRWVER 165
>04_04_0862 +
28843654-28844386,28844486-28844895,28844995-28845560,
28845737-28845803
Length = 591
Score = 51.2 bits (117), Expect = 1e-06
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Frame = +2
Query: 389 SSYDFIIVGGGSAGCVLANRLTEVANWSVLMIEAGDDPPSIANSPGYSLITSTLLPNWGY 568
S YD+IIVGGG+AGC LA L++ + VL++E G P + TL
Sbjct: 47 SYYDYIIVGGGTAGCPLAATLSQ--RFRVLLLERGGSPYDDERIGNMTRFADTL------ 98
Query: 569 FGVNDDFSSQGQKFKS---IRHTRGKMLGGSSSLNSMFYVRGN 688
+ SS Q+F S + ++R ++LGG S +N+ FY R +
Sbjct: 99 --SDTSPSSPAQRFVSEDGVINSRPRVLGGGSCINAGFYTRAS 139
>02_05_0304 +
27721413-27721479,27721561-27722208,27722399-27723371,
27724196-27724237,27724379-27724466,27724911-27725016,
27726499-27726614
Length = 679
Score = 50.0 bits (114), Expect = 2e-06
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Frame = +2
Query: 395 YDFIIVGGGSAGCVLANRLTEVANWSVLMIEAGDDPPSIANSPGYSLITSTLLPNWGYFG 574
YD+II+GGG+AGC LA L+E + VL++E G P A + L G
Sbjct: 43 YDYIIIGGGTAGCPLAATLSE--RYRVLLLERGGSPYDDARVLNMAHFADVLADTSG--- 97
Query: 575 VNDDFSSQGQKFKS---IRHTRGKMLGGSSSLNSMFYVR 682
+S Q+F S + + R ++LGG S +N+ F+ R
Sbjct: 98 -----ASPSQRFVSEDGVINARPRVLGGGSCINAGFFTR 131
>09_03_0047 -
11867302-11867356,11867461-11868032,11868485-11868873,
11869018-11869331,11871028-11871382,11872004-11872076
Length = 585
Score = 49.6 bits (113), Expect = 3e-06
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Frame = +2
Query: 392 SYDFIIVGGGSAGCVLANRLTEVANWSVLMIEAGDDP---PSIANSPGYSLITSTLLPNW 562
+YD+I+VGGG+AGC LA L+ + VL++E G P +++ + + S + P
Sbjct: 50 TYDYIVVGGGTAGCPLAATLS--LKYKVLLLERGGSPYGNRNVSYMENFHIGLSNMAP-- 105
Query: 563 GYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVR--GNRADYDNWAEN-GNEGW 733
D S + + R ++LGG + +N+ FY R N W E+ NE +
Sbjct: 106 ------DSASQAFISTDGVINARARVLGGGTCINAGFYSRASSNFIQEVGWDEDLVNESF 159
Query: 734 DW--NTVIQYFK 763
W + ++Q+ K
Sbjct: 160 PWVEDKIVQWPK 171
>03_01_0127 +
988066-988171,988259-988881,988986-989396,989463-990037,
990137-990194
Length = 590
Score = 46.8 bits (106), Expect = 2e-05
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
Frame = +2
Query: 389 SSYDFIIVGGGSAGCVLANRLTEVANWSVLMIEAGDDPPSIANSPGYSLITSTLLPNWGY 568
S Y++I+VGGG+AGC LA L+E + VL++E G P N L
Sbjct: 55 SYYNYIVVGGGTAGCPLAATLSERSR--VLLLERGGLPYGNRNVSSEYHFADAL------ 106
Query: 569 FGVNDDFSSQGQKFKS---IRHTRGKMLGGSSSLNSMFYVRGNRADYDNWAENGNEGWDW 739
+ S Q+F S + + R ++LGG S LN+ FY R + + Y A GWD
Sbjct: 107 --ADTSPRSPAQRFVSEDGVVNARARVLGGGSCLNAGFYTRAS-SGYVRAA-----GWDP 158
Query: 740 NTVIQYFKKSER 775
V ++ ER
Sbjct: 159 RLVNASYRWVER 170
>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
16032434-16032715,16032790-16032948,16033034-16033390,
16033482-16033622,16033919-16034045,16034121-16034263,
16034740-16034917,16035019-16035552,16035628-16035812,
16036551-16036637,16036710-16036850,16036896-16037175,
16037944-16038020,16038326-16039138,16039292-16039801,
16039926-16040056,16040192-16040246,16040364-16040564,
16040640-16040909,16041103-16041184,16041271-16041434,
16041532-16041690,16041762-16042083,16042158-16042544,
16042811-16042999,16043233-16043317,16043458-16043753,
16043862-16043965,16044484-16044513,16044602-16044817,
16044923-16045540,16045718-16045993,16046619-16046762,
16046854-16046962,16047291-16047475,16047557-16047670,
16048348-16048479,16048929-16049249,16049424-16049891,
16054482-16054547,16054691-16054828,16054917-16055015,
16057098-16057194,16057661-16057761,16057858-16058085,
16059175-16059381,16059451-16059571,16059921-16059988,
16060148-16060213,16060396-16060509,16060949-16061300,
16063571-16063663,16063764-16063922,16064224-16064287,
16064385-16064577,16064673-16064710,16065510-16065645,
16065726-16065914,16065994-16066095,16067660-16067777,
16067861-16067964,16070338-16070346,16071428-16071475,
16071581-16071676,16072430-16072533,16073964-16074045,
16076573-16076601,16076708-16076963
Length = 4246
Score = 31.5 bits (68), Expect = 0.87
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +1
Query: 301 IRSDTAANNRSIVFRNWRASVPCSRQRARFELRLHNRGRRISRLRTS*QTHRSRQLVCAD 480
+ ++T N++++V N R+ CSR F+L + R+ R+ R RQ V D
Sbjct: 3504 LMNNTTGNDQALVRVNVRSGTKCSRYEVVFQLACWSSPYRVEN-RSMFLPVRFRQ-VGGD 3561
Query: 481 DRSWR 495
D SWR
Sbjct: 3562 DYSWR 3566
>07_01_0547 +
4052618-4052659,4055575-4055741,4055839-4056556,
4056678-4057114,4057241-4057315,4057490-4057673,
4057759-4057854,4057952-4058018,4058556-4058715,
4058808-4059199,4059254-4059300
Length = 794
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 403 HNRGRRISRLRTS*QTHRSRQLVCADDRSWRRPSKHS**SRLFAYNFDLT 552
H+ ++ S+L S S VCAD+ +PSK S RLFA LT
Sbjct: 59 HDNAQKESKLSKSSFAEFSESEVCADESDKNKPSKSSNAVRLFACTSTLT 108
>10_08_0509 + 18419815-18422150,18422249-18422291,18423154-18423487,
18423766-18423878,18424461-18424589,18424771-18424864,
18424967-18425050,18425859-18426047,18426897-18427017,
18427476-18427692
Length = 1219
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 281 VKILIPILEVIQLLIIALSSFEIGEPLYPAHANVPDSSYDFIIVGG 418
V ++I +E++ L I +S + YP + V SY ++ GG
Sbjct: 1005 VGVIINTIELLSALSILQNSSVVSSSTYPKSSKVSQQSYSVVMAGG 1050
>05_01_0335 +
2652334-2652340,2652459-2652550,2652642-2653362,
2653456-2653533,2653658-2653684,2653871-2653938,
2654089-2654174,2654251-2654333,2654478-2654620,
2654709-2654810,2654906-2655199,2655282-2655404,
2655733-2656119
Length = 736
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +2
Query: 581 DDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRADYDNWAENGNEGWDWNTV 748
+D ++ + K ++ +GK+ G ++S+F G D+ +++ + +DWNTV
Sbjct: 97 EDLETERRLAKKLKVKKGKLGGPDDGMDSLFADLGFEGDFG--SDDEAKEFDWNTV 150
>03_05_0880 -
28450248-28450458,28451911-28452013,28452135-28452280,
28452629-28452801,28453267-28453539
Length = 301
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 713 ENGNEGWDWNTVIQYFKKSER 775
ENG+E W W TV+ Y+ +S R
Sbjct: 281 ENGSEKWIWKTVVLYYIESFR 301
>02_05_0717 +
31190626-31191234,31191954-31192394,31192699-31192802,
31193000-31194384,31194508-31194548,31195065-31195133,
31195335-31195435,31195747-31195825,31195939-31196037,
31196119-31196187,31197609-31197658,31197749-31197925,
31198045-31198152,31198224-31198290
Length = 1132
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 7/48 (14%)
Frame = +2
Query: 380 VPDSSYDFIIVGGGSAGCVL-------ANRLTEVANWSVLMIEAGDDP 502
+ D YD + G G A + A L+ NW +++ G+DP
Sbjct: 214 ISDGFYDLYVTGNGPASITMPSLKDLRAQSLSHRVNWEAVLVHRGEDP 261
>07_03_0536 -
19205515-19205686,19205807-19205931,19206428-19206554,
19206653-19206777,19207616-19207708,19207779-19208052,
19208138-19208269,19208391-19208470,19209049-19209117,
19209227-19209343,19209416-19209484,19209839-19209892,
19210012-19210049,19211243-19211354,19211497-19211619,
19211728-19211755,19212048-19212104,19212984-19213028,
19213340-19213361,19213817-19213844,19214338-19214418
Length = 656
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 519 LLAMLGGSSPASIISTDQLATSVSLLASTQPADPP 415
+L LG S +S+ S + ATSV S P++PP
Sbjct: 594 MLHRLGSSKESSLQSLQETATSVFAKKSEPPSEPP 628
>07_01_0601 + 4464745-4465010,4465274-4466582
Length = 524
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 501 GSSPASIISTDQLATSVSLLASTQPADPPP 412
G P +ISTD L + +A+T P PPP
Sbjct: 168 GQCPQEVISTD-LCLGLGPIAATAPLQPPP 196
>02_05_0568 -
30034280-30034393,30034888-30035163,30035246-30035371,
30035595-30035753,30035893-30036063,30036374-30036493,
30036565-30036924,30038800-30039686,30039790-30040363,
30041379-30041507,30042423-30042494,30042572-30042728,
30042974-30043023,30043569-30044327
Length = 1317
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 519 LLAMLGGSSPASIISTDQLATSVSLLASTQPADPPPTI 406
L+ +LG S PA + S+ + S A+ QP P P +
Sbjct: 117 LMQLLGSSGPAHLDSSASMPPPASEFAAAQPPQPIPAM 154
>01_07_0255 -
42322111-42322308,42322658-42322750,42323127-42323344,
42323476-42323642,42324097-42324207,42324267-42324409,
42324492-42324710,42324975-42325055,42325202-42325381,
42325971-42326301,42326775-42326888,42327036-42327127,
42327631-42328059
Length = 791
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 386 DSSYDFIIVGGGSAGCVLA 442
+ YD I+VGGG AGC A
Sbjct: 102 EERYDVIVVGGGHAGCEAA 120
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,856,157
Number of Sequences: 37544
Number of extensions: 421735
Number of successful extensions: 1164
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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