Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_L08
(846 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical pr... 93 2e-19
AC006768-1|AAF60576.2| 433|Caenorhabditis elegans Hypothetical ... 31 0.78
Z68303-3|CAA92638.1| 248|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 3.1
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 3.1
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 3.1
Z54327-8|CAA91121.2| 451|Caenorhabditis elegans Hypothetical pr... 29 5.5
U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin red... 28 7.3
AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin r... 28 7.3
AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin r... 28 7.3
U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein... 28 9.6
AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical ... 28 9.6
>Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical
protein C34C6.4 protein.
Length = 599
Score = 93.1 bits (221), Expect = 2e-19
Identities = 62/163 (38%), Positives = 87/163 (53%), Gaps = 6/163 (3%)
Frame = +2
Query: 374 ANVPDSSYDFIIVGGGSAGCVLANRLTEVANWSVLMIEAG------DDPPSIANSPGYSL 535
A++ ++ IIVG GSAGCVLANRLTE + VL+IEAG D + + Y+L
Sbjct: 31 ADIAENKPTHIIVGAGSAGCVLANRLTEDPSNRVLLIEAGPVDHKWDWRIHMPAALMYNL 90
Query: 536 ITSTLLPNWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRADYDNWAE 715
+ T NW Y + G + RG++ GGSS+LN+M YVRG+ DY+ W +
Sbjct: 91 CSDTY--NWHYHTTAQ--KNLGNRV--FYWPRGRVWGGSSTLNAMCYVRGHAYDYNRWEK 144
Query: 716 NGNEGWDWNTVIQYFKKSERLDDNHIMSSESAXLHGNKGYLGV 844
G GW++ + YFKK+E D + + GN G L V
Sbjct: 145 EGASGWNYANCLPYFKKAETYSD---ATGPNDPYRGNNGPLYV 184
>AC006768-1|AAF60576.2| 433|Caenorhabditis elegans Hypothetical
protein Y45G12B.3 protein.
Length = 433
Score = 31.5 bits (68), Expect = 0.78
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 365 PAHANVPDSSYDFIIVGGGSAGCVLANR-LTEVANWSVLMIE 487
P +V YD +IVGGG GC A + L E V +IE
Sbjct: 16 PPKKSVDLPKYDLVIVGGGIVGCATARQLLIEKPQLKVALIE 57
>Z68303-3|CAA92638.1| 248|Caenorhabditis elegans Hypothetical
protein ZK809.2 protein.
Length = 248
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = -1
Query: 645 PNILPLVCRMLLNFWP*LEKSSFTPKYPQFGSKVEVISE*PGLLAMLGGSSPASIISTDQ 466
P ILP+ C+ + WP + P YP+FG+ V V P L+ L + + ++T+Q
Sbjct: 154 PVILPVWCKEMEKVWP-----TQPPYYPKFGNTVTVHIGEPFFLSDLKKTVLSKSLTTEQ 208
Query: 465 L 463
+
Sbjct: 209 M 209
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 395 YDFIIVGGGSAGCVLANRLTEVANWSVLMIEAG 493
+D++++GGGS G A R E SV +IE+G
Sbjct: 7 FDYLVIGGGSGGIASARRAREF-GVSVGLIESG 38
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 395 YDFIIVGGGSAGCVLANRLTEVANWSVLMIEAG 493
+D++++GGGS G A R E SV +IE+G
Sbjct: 21 FDYLVIGGGSGGIASARRAREF-GVSVGLIESG 52
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 29.5 bits (63), Expect = 3.1
Identities = 28/106 (26%), Positives = 41/106 (38%)
Frame = +2
Query: 518 SPGYSLITSTLLPNWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRAD 697
S G S S + GY + S+ + SIRHT + GGS S+ RG A
Sbjct: 3056 SQGMSQSMSQHATSAGYSSSGMESSAHNSGYASIRHTGERERGGSEEEFSIGRARGMAAA 3115
Query: 698 YDNWAENGNEGWDWNTVIQYFKKSERLDDNHIMSSESAXLHGNKGY 835
+ + +E V +Y SE D H + + + N Y
Sbjct: 3116 SSGYQHSSSEN---REVEEYC--SEEEDVEHSVGDKRTIVTKNHSY 3156
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 29.5 bits (63), Expect = 3.1
Identities = 28/106 (26%), Positives = 41/106 (38%)
Frame = +2
Query: 518 SPGYSLITSTLLPNWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRAD 697
S G S S + GY + S+ + SIRHT + GGS S+ RG A
Sbjct: 3640 SQGMSQSMSQHATSAGYSSSGMESSAHNSGYASIRHTGERERGGSEEEFSIGRARGMAAA 3699
Query: 698 YDNWAENGNEGWDWNTVIQYFKKSERLDDNHIMSSESAXLHGNKGY 835
+ + +E V +Y SE D H + + + N Y
Sbjct: 3700 SSGYQHSSSEN---REVEEYC--SEEEDVEHSVGDKRTIVTKNHSY 3740
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.5 bits (63), Expect = 3.1
Identities = 28/106 (26%), Positives = 41/106 (38%)
Frame = +2
Query: 518 SPGYSLITSTLLPNWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRAD 697
S G S S + GY + S+ + SIRHT + GGS S+ RG A
Sbjct: 3056 SQGMSQSMSQHATSAGYSSSGMESSAHNSGYASIRHTGERERGGSEEEFSIGRARGMAAA 3115
Query: 698 YDNWAENGNEGWDWNTVIQYFKKSERLDDNHIMSSESAXLHGNKGY 835
+ + +E V +Y SE D H + + + N Y
Sbjct: 3116 SSGYQHSSSEN---REVEEYC--SEEEDVEHSVGDKRTIVTKNHSY 3156
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.5 bits (63), Expect = 3.1
Identities = 28/106 (26%), Positives = 41/106 (38%)
Frame = +2
Query: 518 SPGYSLITSTLLPNWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRAD 697
S G S S + GY + S+ + SIRHT + GGS S+ RG A
Sbjct: 3640 SQGMSQSMSQHATSAGYSSSGMESSAHNSGYASIRHTGERERGGSEEEFSIGRARGMAAA 3699
Query: 698 YDNWAENGNEGWDWNTVIQYFKKSERLDDNHIMSSESAXLHGNKGY 835
+ + +E V +Y SE D H + + + N Y
Sbjct: 3700 SSGYQHSSSEN---REVEEYC--SEEEDVEHSVGDKRTIVTKNHSY 3740
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.5 bits (63), Expect = 3.1
Identities = 28/106 (26%), Positives = 41/106 (38%)
Frame = +2
Query: 518 SPGYSLITSTLLPNWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRAD 697
S G S S + GY + S+ + SIRHT + GGS S+ RG A
Sbjct: 3640 SQGMSQSMSQHATSAGYSSSGMESSAHNSGYASIRHTGERERGGSEEEFSIGRARGMAAA 3699
Query: 698 YDNWAENGNEGWDWNTVIQYFKKSERLDDNHIMSSESAXLHGNKGY 835
+ + +E V +Y SE D H + + + N Y
Sbjct: 3700 SSGYQHSSSEN---REVEEYC--SEEEDVEHSVGDKRTIVTKNHSY 3740
>Z54327-8|CAA91121.2| 451|Caenorhabditis elegans Hypothetical
protein C26D10.3 protein.
Length = 451
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +2
Query: 401 FIIVGGGSAGCVLANRLTEV---ANWSVLMIEAGDDPPSIAN 517
+IIVGGG AG A+++ ++ AN V++I A S+ N
Sbjct: 3 YIIVGGGIAGVSCASQMLQLERSANLEVIIISASSFVKSVEN 44
>U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin
reductase protein 1 protein.
Length = 667
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 386 DSSYDFIIVGGGSAGCVLANRLTEV 460
D +YD I++GGGS G A + +
Sbjct: 170 DHTYDLIVIGGGSGGLAAAKEASRL 194
>AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin
reductase homolog protein.
Length = 525
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 386 DSSYDFIIVGGGSAGCVLANRLTEV 460
D +YD I++GGGS G A + +
Sbjct: 28 DHTYDLIVIGGGSGGLAAAKEASRL 52
>AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin
reductase protein.
Length = 667
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 386 DSSYDFIIVGGGSAGCVLANRLTEV 460
D +YD I++GGGS G A + +
Sbjct: 170 DHTYDLIVIGGGSGGLAAAKEASRL 194
>U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein
721 protein.
Length = 597
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 395 YDFIIVGGGSAGCVLANRLTEVA 463
YD +IVGGG +G A RL ++A
Sbjct: 51 YDVVIVGGGPSGLSAAIRLRQLA 73
>AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical
protein B0019.1 protein.
Length = 724
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 374 ANVPDSSYDFIIVGGGSAGCVLANRLTE-VANWSVLMIEA 490
+N+ + YD I+VG G G A + + SVL++EA
Sbjct: 39 SNIQQTIYDVIVVGAGLTGLTAARNIQQNRPGLSVLVLEA 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,000,577
Number of Sequences: 27780
Number of extensions: 373263
Number of successful extensions: 1067
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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