Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_L07
         (799 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    28   0.075
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   6.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.6  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 28.3 bits (60), Expect = 0.075
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +3

Query: 219 SLSRFPARLNSVNYAQAASNAPKITFVKFEPPKEE 323
           SL RF     +VNY Q  S   KI+ +K  PP EE
Sbjct: 9   SLERF-CTYGNVNYRQRRSQPLKISCLKTTPPPEE 42


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 40  QWYFSYFFYLVLKINIVFIRTLFNQLN 120
           +WY  Y   +++ I  + I ++FN+ N
Sbjct: 39  RWYICYTIGVIITIGCLCIWSIFNKWN 65


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +3

Query: 435 MLTTYASALGIGALVSQNDISHYITMIEGLNLSPATLFLAKV 560
           +L  Y   + I   +S   I + I ++ G  + P T+FL  V
Sbjct: 631 LLMDYEHTVKINENISMPYIGYQIILMIGTVIGPGTIFLMLV 672


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +3

Query: 435 MLTTYASALGIGALVSQNDISHYITMIEGLNLSPATLFLAKV 560
           +L  Y   + I   +S   I + I ++ G  + P T+FL  V
Sbjct: 864 LLMDYEHTVKINENISMLYIGYQIILMIGTVIGPGTIFLMLV 905


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +3

Query: 435 MLTTYASALGIGALVSQNDISHYITMIEGLNLSPATLFLAKV 560
           +L  Y   + I   +S   I + I ++ G  + P T+FL  V
Sbjct: 864 LLMDYEHTVKINENISMLYIGYQIILMIGTVIGPGTIFLMLV 905


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 598 ELDICIGTQPKDCRSKKCI 654
           E+D+ +  + ++CR KKC+
Sbjct: 231 EIDMYMRRKCQECRLKKCL 249


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 620 HSQRIVDQRSVFYRICHVGG 679
           +S++ +   S FY+IC++ G
Sbjct: 6   YSKKDIRSLSFFYKICNIFG 25


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 620 HSQRIVDQRSVFYRICHVGG 679
           +S++ +   S FY+IC++ G
Sbjct: 6   YSKKDIRSLSFFYKICNIFG 25


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = -1

Query: 496 EISFCDTNAPIPSALAYVVNIIP 428
           E   C  N P+P   + ++N  P
Sbjct: 399 EAKHCGVNVPVPPMQSQIINPQP 421


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,799
Number of Sequences: 336
Number of extensions: 3783
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)