Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_L03
         (782 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23RW8 Cluster: Putative uncharacterized protein; n=1; ...    33   6.1  
UniRef50_Q7RF74 Cluster: Streptococcus pyogenes AMV156, putative...    33   8.1  

>UniRef50_Q23RW8 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1768

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
 Frame = -3

Query: 621  ITHLVL-ENTFKKPILNNLKTFSCKVKKMLYKFDKEHQLDLVT*ISDFTEFKFGSNYYTD 445
            IT L   +N  K   +N +K FS  +  +L   D+E        IS+ T+ +  S++Y  
Sbjct: 1264 ITELAFRQNISKNQSINAVKQFSKNINNILQSRDEE----FFKYISE-TKIQTMSDFYDH 1318

Query: 444  LIDFNNVSSHAKLDSLLTFQSCCN 373
             I  + V+++  L ++L FQSC N
Sbjct: 1319 TIYTHQVANNTILYTMLLFQSCLN 1342


>UniRef50_Q7RF74 Cluster: Streptococcus pyogenes AMV156, putative;
            n=5; Plasmodium (Vinckeia)|Rep: Streptococcus pyogenes
            AMV156, putative - Plasmodium yoelii yoelii
          Length = 1319

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = -3

Query: 651  FLINLMFN*FITHLVLENTFKKPILNNLKTFSCKVKKMLY 532
            FL NL F  +IT    EN  K   LNN+K F   +KK +Y
Sbjct: 1207 FLYNLFFFKYITKFTKEN--KNTFLNNVKNFYKNIKKHIY 1244


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,758,852
Number of Sequences: 1657284
Number of extensions: 11060837
Number of successful extensions: 22283
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22277
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66262109095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)