Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_L01
         (926 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       28   0.090
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   1.1  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 28.3 bits (60), Expect = 0.090
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 92  YVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVPKRLHSDQG 235
           YV  + D  ++F++ YP+    A   AK+++     +  PK + SD G
Sbjct: 218 YVFVVIDVFSKFLKLYPLRKATAKIAAKRLIEDFSGYIKPKCVLSDHG 265


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -2

Query: 613 VEDVICNCFCIRFITSNSRFSRELMHSL*CSAS 515
           VE  IC  FC  FIT    F   + + L C +S
Sbjct: 521 VETSICKNFCFGFITKQLIFMIFVTYQLYCWSS 553


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,142
Number of Sequences: 336
Number of extensions: 3837
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25961683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)