Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_L01
(926 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9750| Best HMM Match : rve (HMM E-Value=1.2e-37) 61 1e-09
SB_8127| Best HMM Match : RVT_1 (HMM E-Value=0) 61 1e-09
SB_57310| Best HMM Match : rve (HMM E-Value=2.5e-25) 61 1e-09
SB_13410| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0) 60 3e-09
SB_48115| Best HMM Match : rve (HMM E-Value=5.3e-36) 56 4e-08
SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 56 4e-08
SB_30405| Best HMM Match : rve (HMM E-Value=5.1e-07) 56 4e-08
SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_53279| Best HMM Match : rve (HMM E-Value=5.2e-36) 56 5e-08
SB_49675| Best HMM Match : rve (HMM E-Value=5.2e-36) 56 5e-08
SB_31326| Best HMM Match : rve (HMM E-Value=6.1e-07) 56 5e-08
SB_26992| Best HMM Match : rve (HMM E-Value=6.3e-36) 56 5e-08
SB_15390| Best HMM Match : rve (HMM E-Value=5.2e-36) 56 5e-08
SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36) 56 5e-08
SB_35114| Best HMM Match : RVT_1 (HMM E-Value=2.2e-11) 56 5e-08
SB_9297| Best HMM Match : RVT_1 (HMM E-Value=7e-21) 56 5e-08
SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36) 56 5e-08
SB_10309| Best HMM Match : rve (HMM E-Value=9.6e-32) 55 9e-08
SB_1714| Best HMM Match : rve (HMM E-Value=9.6e-32) 55 9e-08
SB_55817| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_47174| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_33705| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 52 5e-07
SB_8252| Best HMM Match : rve (HMM E-Value=0.13) 52 5e-07
SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 7e-07
SB_18645| Best HMM Match : RVT_1 (HMM E-Value=0.0003) 52 7e-07
SB_21678| Best HMM Match : rve (HMM E-Value=2e-36) 51 1e-06
SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 2e-06
SB_36817| Best HMM Match : rve (HMM E-Value=6.2e-36) 50 2e-06
SB_48097| Best HMM Match : rve (HMM E-Value=2.6e-17) 50 3e-06
SB_34308| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_7177| Best HMM Match : rve (HMM E-Value=4.8e-18) 49 5e-06
SB_41405| Best HMM Match : RVT_1 (HMM E-Value=0) 49 6e-06
SB_45708| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 6e-06
SB_49427| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_38577| Best HMM Match : rve (HMM E-Value=2.4e-24) 47 2e-05
SB_42776| Best HMM Match : rve (HMM E-Value=1.4e-24) 46 3e-05
SB_30773| Best HMM Match : rve (HMM E-Value=0.0063) 46 4e-05
SB_24771| Best HMM Match : RVT_1 (HMM E-Value=0) 46 6e-05
SB_58082| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_9645| Best HMM Match : DUF101 (HMM E-Value=4.3) 41 0.001
SB_37763| Best HMM Match : rve (HMM E-Value=4.2e-27) 41 0.002
SB_14775| Best HMM Match : rve (HMM E-Value=6.6e-15) 41 0.002
SB_605| Best HMM Match : Calx-beta (HMM E-Value=0) 41 0.002
SB_19678| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_26932| Best HMM Match : rve (HMM E-Value=3.2) 40 0.003
SB_54615| Best HMM Match : rve (HMM E-Value=4.4e-25) 39 0.007
SB_31807| Best HMM Match : rve (HMM E-Value=4.4e-25) 39 0.007
SB_10860| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_8703| Best HMM Match : rve (HMM E-Value=1.5e-22) 38 0.009
SB_39528| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.035
SB_41743| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_29251| Best HMM Match : rve (HMM E-Value=2.3e-29) 36 0.046
SB_17670| Best HMM Match : RVT_1 (HMM E-Value=6.1e-25) 36 0.046
SB_47161| Best HMM Match : rve (HMM E-Value=1.8e-22) 36 0.046
SB_43755| Best HMM Match : rve (HMM E-Value=5.6e-11) 36 0.046
SB_46264| Best HMM Match : rve (HMM E-Value=1.9e-16) 36 0.061
SB_37431| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.061
SB_31972| Best HMM Match : RVT_1 (HMM E-Value=2.4e-14) 36 0.061
SB_13550| Best HMM Match : rve (HMM E-Value=3.4e-08) 36 0.061
SB_59388| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.061
SB_47959| Best HMM Match : rve (HMM E-Value=3e-29) 35 0.11
SB_38305| Best HMM Match : CW_binding_1 (HMM E-Value=0.4) 35 0.11
SB_34135| Best HMM Match : rve (HMM E-Value=3e-29) 35 0.11
SB_19553| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_54416| Best HMM Match : rve (HMM E-Value=1.4e-27) 35 0.11
SB_16778| Best HMM Match : rve (HMM E-Value=2.9e-22) 35 0.11
SB_2192| Best HMM Match : rve (HMM E-Value=4e-23) 35 0.11
SB_8975| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_37630| Best HMM Match : rve (HMM E-Value=4e-24) 34 0.19
SB_46439| Best HMM Match : RVT_1 (HMM E-Value=4.8e-25) 34 0.19
SB_45729| Best HMM Match : rve (HMM E-Value=5.8e-21) 34 0.19
SB_45323| Best HMM Match : rve (HMM E-Value=5.3e-31) 33 0.25
SB_41979| Best HMM Match : rve (HMM E-Value=1.3e-23) 33 0.25
SB_23869| Best HMM Match : rve (HMM E-Value=2.2e-16) 33 0.25
SB_17842| Best HMM Match : RVT_1 (HMM E-Value=2.2e-29) 33 0.25
SB_6196| Best HMM Match : rve (HMM E-Value=3.7e-12) 33 0.25
SB_49099| Best HMM Match : rve (HMM E-Value=2e-08) 33 0.25
SB_41460| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_19470| Best HMM Match : rve (HMM E-Value=0.0029) 33 0.33
SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0) 33 0.43
SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26) 33 0.43
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) 32 0.57
SB_37044| Best HMM Match : rve (HMM E-Value=4.1e-07) 32 0.57
SB_16055| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_12331| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.76
SB_28707| Best HMM Match : rve (HMM E-Value=0.011) 32 0.76
SB_31801| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 31 1.3
SB_36585| Best HMM Match : rve (HMM E-Value=6.2e-16) 31 1.7
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 30 2.3
SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12) 30 2.3
SB_54947| Best HMM Match : rve (HMM E-Value=2.3e-31) 30 3.1
SB_45442| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_35391| Best HMM Match : rve (HMM E-Value=2.6e-14) 30 3.1
SB_31254| Best HMM Match : rve (HMM E-Value=5.2e-15) 30 3.1
SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 30 3.1
SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32) 30 3.1
SB_13977| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_57991| Best HMM Match : rve (HMM E-Value=1.1e-10) 30 3.1
SB_45156| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33) 30 3.1
SB_32182| Best HMM Match : Ribosomal_L14 (HMM E-Value=3) 29 4.0
SB_30671| Best HMM Match : rve (HMM E-Value=6.2e-32) 29 4.0
SB_5198| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_7613| Best HMM Match : DNA_pol3_beta (HMM E-Value=4.9) 29 4.0
SB_57868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_57360| Best HMM Match : Peptidase_A17 (HMM E-Value=8.9e-29) 29 5.3
SB_35841| Best HMM Match : rve (HMM E-Value=0.14) 29 5.3
SB_57523| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_46458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_4843| Best HMM Match : rve (HMM E-Value=0.0016) 29 5.3
SB_32391| Best HMM Match : rve (HMM E-Value=4.9e-14) 29 7.1
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_53335| Best HMM Match : rve (HMM E-Value=9.1e-18) 29 7.1
SB_46011| Best HMM Match : DNA_ligase_ZBD (HMM E-Value=2.9) 29 7.1
SB_36211| Best HMM Match : RVT_1 (HMM E-Value=0) 25 7.5
SB_37558| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019) 28 9.3
SB_34460| Best HMM Match : Borrelia_orfA (HMM E-Value=0.3) 28 9.3
SB_18201| Best HMM Match : rve (HMM E-Value=3.6e-21) 28 9.3
SB_144| Best HMM Match : rve (HMM E-Value=3.6e-21) 28 9.3
SB_57521| Best HMM Match : rve (HMM E-Value=0.13) 28 9.3
SB_52460| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_51361| Best HMM Match : rve (HMM E-Value=6.4e-14) 28 9.3
SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_9750| Best HMM Match : rve (HMM E-Value=1.2e-37)
Length = 280
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILH-FX 193
Q+T PFE IS+D + + E S +Y++ + D TRF QAY +K A T+A+++ + +
Sbjct: 33 QTTAPFELISLDFL-HLEKSSGGYEYILVVIDHFTRFAQAYATRNKSAPTVAEKLYNDYI 91
Query: 194 QHFGVPKRLHSDQG 235
FG P R+H DQG
Sbjct: 92 MRFGFPLRIHHDQG 105
>SB_8127| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1623
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILH-FX 193
Q+T PFE IS+D + + E S +Y++ + D TRF QAY +K A T+A+++ + +
Sbjct: 1376 QTTAPFELISLDFL-HLEKSSGGYEYILVVIDHFTRFAQAYATRNKSAPTVAEKLYNDYI 1434
Query: 194 QHFGVPKRLHSDQG 235
FG P R+H DQG
Sbjct: 1435 MRFGFPLRIHHDQG 1448
>SB_57310| Best HMM Match : rve (HMM E-Value=2.5e-25)
Length = 440
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILH-FX 193
Q+T PFE IS+D + + E S +Y++ + D TRF QAY +K A T+A+++ + +
Sbjct: 272 QTTAPFELISLDFL-HLEKSSGGYEYILVVIDHFTRFAQAYATRNKSAPTVAEKLYNDYI 330
Query: 194 QHFGVPKRLHSDQG 235
FG P R+H DQG
Sbjct: 331 MRFGFPLRIHHDQG 344
>SB_13410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1984
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILH-FX 193
Q+T PFE IS+D + + E S +Y++ + D TRF QAY +K A T+A+++ + +
Sbjct: 1160 QTTAPFELISLDFL-HLEKSSGGYEYILVVIDHFTRFAQAYATRNKSAPTVAEKLYNDYI 1218
Query: 194 QHFGVPKRLHSDQG 235
FG P R+H DQG
Sbjct: 1219 MRFGFPLRIHHDQG 1232
>SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0)
Length = 2376
Score = 59.7 bits (138), Expect = 3e-09
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +2
Query: 20 STEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILH-FXQ 196
++ PFERIS+D + + E S KY++ + D TR+ QAY +K A T+AK + + F
Sbjct: 1579 ASSPFERISIDFL-HLEASTGGYKYILVIVDHFTRYAQAYATTNKAAKTVAKHLYNDFVL 1637
Query: 197 HFGVPKRLHSDQG 235
FG P H DQG
Sbjct: 1638 RFGFPFSFHHDQG 1650
>SB_48115| Best HMM Match : rve (HMM E-Value=5.3e-36)
Length = 238
Score = 56.0 bits (129), Expect = 4e-08
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+PFERI++D S+N NK+ + + D+ +RF +P PD T+ K +
Sbjct: 30 KATQPFERINIDFKGPLP-SNNGNKFFLNVVDEYSRFPFVFPCPDVSTPTVIKCLTSLFT 88
Query: 197 HFGVPKRLHSDQG 235
FG+P +HSD+G
Sbjct: 89 MFGMPAYVHSDRG 101
>SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 998
Score = 56.0 bits (129), Expect = 4e-08
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+PFERI++D S+N NK+ + + D+ +RF +P PD T+ K +
Sbjct: 892 KATQPFERINIDFKGPLP-SNNGNKFFLNVVDEYSRFPFVFPCPDVSTPTVIKCLTSLFT 950
Query: 197 HFGVPKRLHSDQG 235
FG+P +HSD+G
Sbjct: 951 MFGMPAYVHSDRG 963
>SB_30405| Best HMM Match : rve (HMM E-Value=5.1e-07)
Length = 409
Score = 56.0 bits (129), Expect = 4e-08
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+PFERI++D S+N NK+ + + D+ +RF +P PD T+ K +
Sbjct: 303 KATQPFERINIDFKGPLP-SNNGNKFFLNVVDEYSRFPFVFPCPDVSTPTVIKCLTSLFT 361
Query: 197 HFGVPKRLHSDQG 235
FG+P +HSD+G
Sbjct: 362 MFGMPAYVHSDRG 374
>SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 56.0 bits (129), Expect = 4e-08
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+PFERI++D S+N NK+ + + D+ +RF +P PD T+ K +
Sbjct: 993 KATQPFERINIDFKGPLP-SNNGNKFFLNVVDEYSRFPFVFPCPDVSTPTVIKCLTSLFT 1051
Query: 197 HFGVPKRLHSDQG 235
FG+P +HSD+G
Sbjct: 1052 MFGMPAYVHSDRG 1064
>SB_53279| Best HMM Match : rve (HMM E-Value=5.2e-36)
Length = 337
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+PFERI++D S+N NK+ + + D+ +RF +P PD T+ K +
Sbjct: 129 KATKPFERINIDFKGPLP-SNNGNKFFLNVVDEYSRFPFVFPCPDVSTPTVIKCLTSLFT 187
Query: 197 HFGVPKRLHSDQG 235
FG+P +HSD+G
Sbjct: 188 MFGMPAYVHSDRG 200
>SB_49675| Best HMM Match : rve (HMM E-Value=5.2e-36)
Length = 412
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+PFERI++D S+N NK+ + + D+ +RF +P PD T+ K +
Sbjct: 114 KATKPFERINIDFKGPLP-SNNGNKFFLNVVDEYSRFPFVFPCPDVSTPTVIKCLTSLFT 172
Query: 197 HFGVPKRLHSDQG 235
FG+P +HSD+G
Sbjct: 173 MFGMPAYVHSDRG 185
>SB_31326| Best HMM Match : rve (HMM E-Value=6.1e-07)
Length = 330
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+PFERI++D S+N NK+ + + D+ +RF +P PD T+ K +
Sbjct: 224 KATQPFERINIDFKGPLP-SNNGNKFFLNVVDEYSRFPFVFPCPDVSTPTVIKCLTSVFT 282
Query: 197 HFGVPKRLHSDQG 235
FG+P +HSD+G
Sbjct: 283 MFGMPAYVHSDRG 295
>SB_26992| Best HMM Match : rve (HMM E-Value=6.3e-36)
Length = 1022
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+PFERI++D S+N NK+ + + D+ +RF +P PD T+ K +
Sbjct: 600 KATKPFERINIDFKGPLP-SNNGNKFFLNVVDEYSRFPFVFPCPDVSTPTVIKCLTSLFT 658
Query: 197 HFGVPKRLHSDQG 235
FG+P +HSD+G
Sbjct: 659 MFGMPAYVHSDRG 671
>SB_15390| Best HMM Match : rve (HMM E-Value=5.2e-36)
Length = 748
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+PFERI++D S+N NK+ + + D+ +RF +P PD T+ K +
Sbjct: 447 KATKPFERINIDFKGPLP-SNNGNKFFLNVVDEYSRFPFVFPCPDVSTPTVIKCLTSLFT 505
Query: 197 HFGVPKRLHSDQG 235
FG+P +HSD+G
Sbjct: 506 MFGMPAYVHSDRG 518
>SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36)
Length = 1048
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+PFERI++D S+N NK+ + + D+ +RF +P PD T+ K +
Sbjct: 874 KATKPFERINIDFKGPLP-SNNGNKFFLNVVDEYSRFPFVFPCPDVSTPTVIKCLTSLFT 932
Query: 197 HFGVPKRLHSDQG 235
FG+P +HSD+G
Sbjct: 933 MFGMPAYVHSDRG 945
>SB_35114| Best HMM Match : RVT_1 (HMM E-Value=2.2e-11)
Length = 512
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+PFERI++D S+N NK+ + + D+ +RF +P PD T+ K +
Sbjct: 402 KATKPFERINIDFKGPLP-SNNGNKFFLNVVDEYSRFPFVFPCPDVSTPTVIKCLTSLFT 460
Query: 197 HFGVPKRLHSDQG 235
FG+P +HSD+G
Sbjct: 461 MFGMPAYVHSDRG 473
>SB_9297| Best HMM Match : RVT_1 (HMM E-Value=7e-21)
Length = 1032
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+PFERI++D S+N NK+ + + D+ +RF +P PD T+ K +
Sbjct: 508 KATKPFERINIDFKGPLP-SNNGNKFFLNVVDEYSRFPFVFPCPDVSTPTVIKCLTSLFT 566
Query: 197 HFGVPKRLHSDQG 235
FG+P +HSD+G
Sbjct: 567 MFGMPAYVHSDRG 579
>SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36)
Length = 1677
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+PFERI++D S+N NK+ + + D+ +RF +P PD T+ K +
Sbjct: 876 KATKPFERINIDFKGPLP-SNNGNKFFLNVVDEYSRFPFVFPCPDVSTPTVIKCLTSLFT 934
Query: 197 HFGVPKRLHSDQG 235
FG+P +HSD+G
Sbjct: 935 MFGMPAYVHSDRG 947
>SB_10309| Best HMM Match : rve (HMM E-Value=9.6e-32)
Length = 546
Score = 54.8 bits (126), Expect = 9e-08
Identities = 26/73 (35%), Positives = 42/73 (57%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+PFERI++D S+N NK+ + + D+ RF +P PD T+ K +
Sbjct: 274 KATKPFERINIDFKGPLP-SNNGNKFFLNVVDEYLRFPFVFPCPDVSTPTVIKCLTSLFT 332
Query: 197 HFGVPKRLHSDQG 235
FG+P +HSD+G
Sbjct: 333 MFGMPAYVHSDRG 345
>SB_1714| Best HMM Match : rve (HMM E-Value=9.6e-32)
Length = 517
Score = 54.8 bits (126), Expect = 9e-08
Identities = 26/73 (35%), Positives = 42/73 (57%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+PFERI++D S+N NK+ + + D+ RF +P PD T+ K +
Sbjct: 274 KATKPFERINIDFKGPLP-SNNGNKFFLNVVDEYLRFPFVFPCPDVSTPTVIKCLTSLFT 332
Query: 197 HFGVPKRLHSDQG 235
FG+P +HSD+G
Sbjct: 333 MFGMPAYVHSDRG 345
>SB_55817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 980
Score = 54.0 bits (124), Expect = 2e-07
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +2
Query: 20 STEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILH-FXQ 196
++ PFERIS+D + + E S +YV+ + D TR+ QAY +K A T+AK + +
Sbjct: 282 ASSPFERISIDFL-HLEASTGGYEYVLVIVDHFTRYAQAYATTNKAAKTVAKHLYNDSVL 340
Query: 197 HFGVPKRLHSDQG 235
G P H DQG
Sbjct: 341 RLGFPSSFHHDQG 353
>SB_47174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +2
Query: 29 PFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILH-FXQHFG 205
PF+R++MD++ S NKY++ + D LT++ +A +PD A TIA+ ++ FG
Sbjct: 803 PFDRVAMDILGPFPTSSRGNKYILVISDYLTKWPEAIALPDTTASTIAEVFVNEIIARFG 862
Query: 206 VPKRLHSDQ 232
P+ L SD+
Sbjct: 863 CPRTLLSDR 871
>SB_33705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 846
Score = 53.2 bits (122), Expect = 3e-07
Identities = 29/85 (34%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +2
Query: 20 STEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL-HFXQ 196
++ P E ++MDLV Y + S+ ++Y + + D T++++ +P+ ++++ TIAK+I +
Sbjct: 599 TSRPGELVTMDLVEYLK-SNRGSQYCLDMVDHFTKWLELFPLRNQKSETIAKRINDDWIP 657
Query: 197 HFGVPKRLHSDQG*ANLQPSKIQII 271
G P++LHSDQ ANL I+ I
Sbjct: 658 RNGAPEQLHSDQA-ANLNSQNIEEI 681
>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
Length = 2160
Score = 52.4 bits (120), Expect = 5e-07
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+PFERI++D S+N NK+ + + D+ +RF + PD T+ K +
Sbjct: 845 KATKPFERINIDFKGPLP-SNNGNKFFLNVVDEYSRFPFVFTCPDVSTPTVIKCLTSLFT 903
Query: 197 HFGVPKRLHSDQG 235
FG+P +HSD+G
Sbjct: 904 MFGMPAYVHSDRG 916
>SB_8252| Best HMM Match : rve (HMM E-Value=0.13)
Length = 264
Score = 52.4 bits (120), Expect = 5e-07
Identities = 22/49 (44%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = +2
Query: 92 YVITLQDDLTRFVQAYPIPDKEAITIAKQIL-HFXQHFGVPKRLHSDQG 235
Y T ++ +++ +AYPIP++EA+T+A+ ++ H+ FGVP LHSDQG
Sbjct: 109 YRATTKNYFSKWPEAYPIPNQEAVTVAEVLVAHYISRFGVPLELHSDQG 157
>SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2028
Score = 52.0 bits (119), Expect = 7e-07
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 VITSQSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL 184
+++ Q+ EP + ++MD +S E ++ + D T+F A+P +++A T+AK +
Sbjct: 1023 MLSLQANEPMDLLAMDFLSLEE-GRGGMSNILVVTDSFTKFAWAFPTRNQKASTVAKILW 1081
Query: 185 H-FXQHFGVPKRLHSDQG 235
++G P+RLHSDQG
Sbjct: 1082 EKILINYGFPRRLHSDQG 1099
>SB_18645| Best HMM Match : RVT_1 (HMM E-Value=0.0003)
Length = 1205
Score = 52.0 bits (119), Expect = 7e-07
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 VITSQSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL 184
+++ Q++EP + ++MD +S E ++ + D T+F A+P +++A T+AK +
Sbjct: 1102 MLSLQASEPMDLLAMDFLSLEE-GRGGMSNILVVTDSFTKFAWAFPTCNQKASTVAKILW 1160
Query: 185 H-FXQHFGVPKRLHSDQG 235
++G P+RLHSDQG
Sbjct: 1161 EKILINYGFPRRLHSDQG 1178
>SB_21678| Best HMM Match : rve (HMM E-Value=2e-36)
Length = 350
Score = 51.2 bits (117), Expect = 1e-06
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 VITSQSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL 184
+++ Q+ EP + ++MD +S E ++ + D T+F A+P +++A T+AK +
Sbjct: 28 MLSLQANEPMDLLAMDFLSLEE-GRGGMSNILVVTDSFTKFAWAFPTRNQKAGTVAKILW 86
Query: 185 H-FXQHFGVPKRLHSDQG 235
++G P+RLHSDQG
Sbjct: 87 EKILINYGFPRRLHSDQG 104
>SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1356
Score = 50.8 bits (116), Expect = 2e-06
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 20 STEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL-HFXQ 196
+T P E ++MD SD V+ L D T+F A P D++A T+ K ++ +
Sbjct: 991 ATRPLEVLAMDFTVLEPSSDGREN-VLVLTDVFTKFTLAIPTRDQKASTVVKALVKEWFL 1049
Query: 197 HFGVPKRLHSDQG 235
+GVP R+HSDQG
Sbjct: 1050 VYGVPHRIHSDQG 1062
>SB_36817| Best HMM Match : rve (HMM E-Value=6.2e-36)
Length = 924
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+P ER+S+D S +N Y++T+ D+ +RF A+P P+ + T+ K +
Sbjct: 626 KATQPMERLSIDFKGPLPTS-THNPYMLTVVDEYSRFPFAFPCPNTHSSTVIKCLEQIFT 684
Query: 197 HFGVPKRLHSDQG 235
G P +HSD+G
Sbjct: 685 LCGTPSYIHSDRG 697
>SB_48097| Best HMM Match : rve (HMM E-Value=2.6e-17)
Length = 169
Score = 50.0 bits (114), Expect = 3e-06
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 86 NKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL-HFXQHFGVPKRLHSDQG 235
N Y++ D LTRF QAYP +K A T+AK+I FG P R+H D+G
Sbjct: 7 NVYILLFVDFLTRFCQAYPTRNKSAPTVAKKIYDDLIPRFGFPSRIHYDEG 57
>SB_34308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 49.2 bits (112), Expect = 5e-06
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILH-FX 193
Q+ FE +S+++V + E S +YV+ + D TRF QAY +K +T+A+++ + +
Sbjct: 290 QTMAQFELVSLNVV-HLECSRRGYEYVLVVVDYFTRFAQAYATRNKSVLTVAEKLYNDYI 348
Query: 194 QHFGVPKRLHSDQ 232
FG P R H DQ
Sbjct: 349 IRFGFPLRNHHDQ 361
>SB_7177| Best HMM Match : rve (HMM E-Value=4.8e-18)
Length = 311
Score = 49.2 bits (112), Expect = 5e-06
Identities = 26/76 (34%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = +2
Query: 47 MDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILH-FXQHFGVPKRLH 223
MD+V Y + S ++Y + + + T++++ +P+ ++++ TIAK+I + G P++LH
Sbjct: 1 MDVVEYPK-SSRGSQYCLVMVNHFTKWLELFPLRNQKSETIAKRITDGWIPRHGAPEQLH 59
Query: 224 SDQG*ANLQPSKIQII 271
SDQG ANL I+ I
Sbjct: 60 SDQG-ANLNSQNIEEI 74
>SB_41405| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2639
Score = 48.8 bits (111), Expect = 6e-06
Identities = 21/70 (30%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +2
Query: 29 PFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL-HFXQHFG 205
PF+RI++D + +SD+ N+Y++ + D LT++ +A+ +P+ A +A+ ++
Sbjct: 1243 PFDRIAIDAMGPFPVSDDGNRYILVISDYLTKWPEAFAVPNITAPVVARILVDEIIARHS 1302
Query: 206 VPKRLHSDQG 235
P +L SD+G
Sbjct: 1303 CPNQLLSDRG 1312
>SB_45708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1510
Score = 48.8 bits (111), Expect = 6e-06
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 VITSQSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL 184
+++ Q+ EP ++MD +S E ++ + D T+F A+P +++A T+AK +
Sbjct: 1165 MLSLQANEPMNLLAMDFLSLEE-GRGGMSNILVVTDLFTKFAWAFPTRNQKAGTVAKILW 1223
Query: 185 H-FXQHFGVPKRLHSDQG 235
++G P+RLHSDQG
Sbjct: 1224 EKILINYGFPRRLHSDQG 1241
>SB_49427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1958
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 29 PFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL-HFXQHFG 205
PF+RI++D + +SDN N+Y++ + LT++ +A+ +P A +A+ ++
Sbjct: 1669 PFDRIAIDAMGPFPVSDNGNRYILVISGYLTKWPEAFAVPHITAPVVARILVDQIIARHS 1728
Query: 206 VPKRLHSDQG 235
P +L SD+G
Sbjct: 1729 CPNQLMSDRG 1738
>SB_38577| Best HMM Match : rve (HMM E-Value=2.4e-24)
Length = 205
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 74 SDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILH-FXQHFGVPKRLHSDQG 235
S +Y++ + D TRF QAY +K A T+A+++ + + FG P R+H DQG
Sbjct: 3 SSGGYEYILVVIDHFTRFAQAYATRNKSAPTVAEKLYNDYIMRFGFPLRIHHDQG 57
>SB_42776| Best HMM Match : rve (HMM E-Value=1.4e-24)
Length = 627
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQ 196
++T+PFERI++D S+N NK+ + + D+ +RF +P PD T+ K +
Sbjct: 364 KATQPFERINIDFKGPLP-SNNGNKFFLNVVDEYSRFPFVFPCPDVSTPTVIKCLTSLFT 422
Query: 197 HFGVP 211
FG P
Sbjct: 423 MFGAP 427
>SB_30773| Best HMM Match : rve (HMM E-Value=0.0063)
Length = 336
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +2
Query: 29 PFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGV 208
PFER+ +D S N N Y + + D+ +RF PD T+ K + G+
Sbjct: 242 PFERLDIDFKGPLP-SSNGNYYFLNIMDEYSRFPFVLSCPDVSTSTVIKCLTSLFSLVGM 300
Query: 209 PKRLHSDQG*ANLQPSKIQ 265
P +HSD+G A+ S++Q
Sbjct: 301 PAYIHSDRG-ASFMSSELQ 318
>SB_24771| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1387
Score = 45.6 bits (103), Expect = 6e-05
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQI 181
Q+T PFE IS+D + + E S +Y++ + D TRF QAY +K A T+A+++
Sbjct: 825 QTTAPFELISLDFL-HLEKSSGGYEYILVVIDHFTRFAQAYATRNKSAPTVAEKL 878
>SB_58082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 41.9 bits (94), Expect = 7e-04
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 83 NNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVPKRLHSDQG 235
+N Y++T+ D+ +RF A+P P+ + T+ K + G P +HSD+G
Sbjct: 801 HNPYILTVVDEYSRFPFAFPCPNMHSSTVIKCLEQIFTLCGTPSYIHSDRG 851
>SB_9645| Best HMM Match : DUF101 (HMM E-Value=4.3)
Length = 360
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAK 175
++T+PFERI++D S+N NK+ + + D+ +RF +P PD T+ K
Sbjct: 299 KATKPFERINIDFKGPLP-SNNGNKFFLNVVDEYSRFPFVFPCPDVSTPTVIK 350
>SB_37763| Best HMM Match : rve (HMM E-Value=4.2e-27)
Length = 510
Score = 40.7 bits (91), Expect = 0.002
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = +2
Query: 35 ERISMDLVSYSE----ISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHF 202
ER +DLVS I KY++++ D +RF+ P+ KE++ +A+ ++ +
Sbjct: 194 ERHQIDLVSMISVPVTIDGKTYKYIMSVIDIFSRFLFLRPLETKESLEVAENLVDIYKEH 253
Query: 203 GVPKRLHSDQG 235
G P L SDQG
Sbjct: 254 GPPLILQSDQG 264
>SB_14775| Best HMM Match : rve (HMM E-Value=6.6e-15)
Length = 167
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +2
Query: 86 NKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVPKRLHSDQG*ANLQPSKIQ 265
NKY++ + D TR+ +A P+ +A +A+ ++ + FGVP+ + +DQG +N Q S
Sbjct: 29 NKYILVIVDYATRYPEAVPLKSIDAEHVAEDLVKLSR-FGVPEEILTDQG-SNCQGSNCL 86
Query: 266 I 268
I
Sbjct: 87 I 87
>SB_605| Best HMM Match : Calx-beta (HMM E-Value=0)
Length = 1958
Score = 40.7 bits (91), Expect = 0.002
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Frame = +3
Query: 534 ECINSLEKRELDVMNLMQKQLQITSSTIKNFNESIFKITYDEQIINENINRLNEYINTTK 713
+ +NS++ +D L K +S F S ++++D IIN+NI E N T
Sbjct: 469 DIVNSVKVTLVDDTALAGKDYDGPTSFYVEFKSSETQLSFDIPIINDNITEKKEQFNVTL 528
Query: 714 NTVFD-IKISEEISTISLQILELVTSLE------NDINDXLTSILXAKSNTVHPSIIXLS 872
+T + + I +++T+ +Q V +E N+ +T ++ +T P II +
Sbjct: 529 STTENGVTIKPDVATVFIQDNNAVIGVEDTSVNVNEDEGSVTIVVTRTGDTSVPHIINVQ 588
Query: 873 VSTKS 887
V+ S
Sbjct: 589 VTDGS 593
>SB_19678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 849
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = +2
Query: 35 ERISMDLVSYSE----ISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHF 202
ER +DLVS I KY++++ D +RF+ P+ KE++ +A+ ++ +
Sbjct: 109 ERHQIDLVSKISVPVTIDGKTYKYIMSVIDIFSRFLFLRPLETKESLEVAENLVDIYKEH 168
Query: 203 GVPKRLHSDQG 235
G P L SDQG
Sbjct: 169 GPPLILQSDQG 179
>SB_26932| Best HMM Match : rve (HMM E-Value=3.2)
Length = 241
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEISDNNNK---YVITLQDDLTRFVQAYPIPDKEAITIAKQILH 187
Q+ + MDL+ + +I N + + + ++D +++ P+ KE++ +A+ I
Sbjct: 129 QADRFLSHLEMDLIDFRKIPCNCGRRHLWALHVEDHFSKYSWLLPLKKKESLEVAQTIEP 188
Query: 188 FXQHFGVPKRLHSDQG 235
FG P +LH+D+G
Sbjct: 189 LFWQFGFPCKLHTDRG 204
>SB_54615| Best HMM Match : rve (HMM E-Value=4.4e-25)
Length = 460
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +2
Query: 41 ISMDLVSYSEISDN-NNKYVITL--QDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVP 211
+ MDL+ + +I N ++++ L +D +++ P+ KE++ +A+ I FG P
Sbjct: 166 LEMDLIVFRKIPCNCGRRHLLALHVEDHFSKYSWLLPLKKKESLEVAQTIEPLFWQFGFP 225
Query: 212 KRLHSDQG 235
+LH+D+G
Sbjct: 226 CKLHTDRG 233
>SB_31807| Best HMM Match : rve (HMM E-Value=4.4e-25)
Length = 460
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +2
Query: 41 ISMDLVSYSEISDN-NNKYVITL--QDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVP 211
+ MDL+ + +I N ++++ L +D +++ P+ KE++ +A+ I FG P
Sbjct: 166 LEMDLIVFRKIPCNCGRRHLLALHVEDHFSKYSWLLPLKKKESLEVAQTIEPLFWQFGFP 225
Query: 212 KRLHSDQG 235
+LH+D+G
Sbjct: 226 CKLHTDRG 233
>SB_10860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1292
Score = 38.3 bits (85), Expect = 0.009
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 98 ITLQDDLTRFVQAYPIPDKEAITIAKQILH-FXQHFGVPKRLHSDQG 235
++ D T++ A+P +++A T+AK + +G P+RLHSDQG
Sbjct: 940 VSTTDSFTKYTWAFPTRNQKASTVAKILWERIFVSYGFPQRLHSDQG 986
>SB_8703| Best HMM Match : rve (HMM E-Value=1.5e-22)
Length = 382
Score = 38.3 bits (85), Expect = 0.009
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +2
Query: 98 ITLQDDLTRFVQAYPIPDKEAITIAKQILH-FXQHFGVPKRLHSDQG 235
++ D T++ A+P +++A T+AK + +G P+RLHSDQG
Sbjct: 40 VSTTDSFTKYTWAFPTRNQKASTVAKILWERIFVSYGFPQRLHSDQG 86
>SB_39528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1029
Score = 36.3 bits (80), Expect = 0.035
Identities = 15/68 (22%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 41 ISMDLVSYSEIS---DNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVP 211
I +DL+ + +++V+ + D +++V +P+ K A+ + + + ++ FG P
Sbjct: 717 IELDLMDFRNTPCKCSKRHQWVLNIIDHHSKYVTCWPLKGKNAVEVLQGLKNYCYSFGFP 776
Query: 212 KRLHSDQG 235
K++ D G
Sbjct: 777 KKIFCDNG 784
>SB_41743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1436
Score = 35.9 bits (79), Expect = 0.046
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 41 ISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILH 187
I++D + + E S N+Y++ + D TRF QAYP +K A T LH
Sbjct: 926 IAIDFL-HLEKSSRRNEYILLVVDHFTRFCQAYPTRNKSAQTNLFHQLH 973
>SB_29251| Best HMM Match : rve (HMM E-Value=2.3e-29)
Length = 324
Score = 35.9 bits (79), Expect = 0.046
Identities = 15/68 (22%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 41 ISMDLVSYSEIS---DNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVP 211
I +DL+ + +++V+ + D +++V +P+ K A+ + + + ++ FG P
Sbjct: 165 IELDLMDFRNTQCKCSKRHQWVLNIIDHHSKYVTCWPLKGKNAVEVLQGLKNYCYSFGFP 224
Query: 212 KRLHSDQG 235
K++ D G
Sbjct: 225 KKIVCDNG 232
>SB_17670| Best HMM Match : RVT_1 (HMM E-Value=6.1e-25)
Length = 1271
Score = 35.9 bits (79), Expect = 0.046
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +2
Query: 2 MVITSQST-EPFERISMDLVSYSEISDN-----NNKYVITLQDDLTRFVQAYPIPDKEAI 163
++ T +ST EP + + ++E+S + + +Y++ + DD TRF + A
Sbjct: 966 LITTPESTREPLQMSPLPKAPWTEVSVDFAELASKEYLLLMVDDYTRFPIVEIVSSTSAT 1025
Query: 164 TIAKQILHFXQHFGVPKRLHSDQG 235
T+ ++ +GVP+ + SD G
Sbjct: 1026 TVLPKLDKVFSEYGVPEVVRSDNG 1049
>SB_47161| Best HMM Match : rve (HMM E-Value=1.8e-22)
Length = 1046
Score = 35.9 bits (79), Expect = 0.046
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +2
Query: 2 MVITSQST-EPFERISMDLVSYSEISDN-----NNKYVITLQDDLTRFVQAYPIPDKEAI 163
++ T +ST EP + + ++E+S + + +Y++ + DD TRF + A
Sbjct: 737 LITTPESTREPLQMYPLPKAPWTEVSVDFAELASKEYLLLIIDDYTRFPIVEIVSSTSAA 796
Query: 164 TIAKQILHFXQHFGVPKRLHSDQG 235
T+ ++ +GVP+ + SD G
Sbjct: 797 TVLPKLDKVFSEYGVPEVVRSDNG 820
>SB_43755| Best HMM Match : rve (HMM E-Value=5.6e-11)
Length = 461
Score = 35.9 bits (79), Expect = 0.046
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +2
Query: 155 EAITIAKQIL-HFXQHFGVPKRLHSDQG 235
EA+T+A+ ++ H+ FGVP LHSDQG
Sbjct: 205 EAVTVAEVLVAHYISRFGVPLELHSDQG 232
>SB_46264| Best HMM Match : rve (HMM E-Value=1.9e-16)
Length = 979
Score = 35.5 bits (78), Expect = 0.061
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +2
Query: 2 MVITSQSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQI 181
M++++ P++RI+MDL NNKY++ + D +RFV+ + A + +
Sbjct: 787 MIVSNLPKLPWQRIAMDLFQLK-----NNKYLLVV-DYFSRFVEVKKLTCTTAPAVIDHL 840
Query: 182 LHFXQHFGVPKRLHSDQG 235
G+P+ + SD G
Sbjct: 841 KSLISRHGIPETVVSDGG 858
>SB_37431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 643
Score = 35.5 bits (78), Expect = 0.061
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +2
Query: 2 MVITSQST-EPFERISMDLVSYSEISDN-----NNKYVITLQDDLTRFVQAYPIPDKEAI 163
++ T +S EP + S+ ++E+S + + +Y++ + DD TRF + A
Sbjct: 475 LITTPESMREPLQMSSLPKAPWTEVSVDFAELASKEYLLLIVDDYTRFPIVEIVSSTSAA 534
Query: 164 TIAKQILHFXQHFGVPKRLHSDQG 235
T+ ++ +GVP+ + SD G
Sbjct: 535 TVLPKLDKVLSEYGVPEVVRSDNG 558
>SB_31972| Best HMM Match : RVT_1 (HMM E-Value=2.4e-14)
Length = 1242
Score = 35.5 bits (78), Expect = 0.061
Identities = 20/78 (25%), Positives = 40/78 (51%)
Frame = +2
Query: 2 MVITSQSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQI 181
+V T P+ +S+D ++E++ + +Y++ + DD TRF + A T+ ++
Sbjct: 941 LVKTKSLLAPWTEVSVD---FAELA--SKEYLLLMVDDYTRFPIVEIVSSTSATTVLPKL 995
Query: 182 LHFXQHFGVPKRLHSDQG 235
+GVP+ + SD G
Sbjct: 996 DKVFSEYGVPEVVRSDNG 1013
>SB_13550| Best HMM Match : rve (HMM E-Value=3.4e-08)
Length = 241
Score = 35.5 bits (78), Expect = 0.061
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +2
Query: 41 ISMDLVSYSEISDNNNK---YVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVP 211
+ MDL+ + +I N + + + ++D +++ P+ KE++ +A+ I FG P
Sbjct: 118 LEMDLIDFRKIPCNCGRRHLWALHVKDHFSKYSWLLPLKKKESLEVAQTIEPLFWLFGFP 177
Query: 212 KRLHSDQ 232
+LH+D+
Sbjct: 178 CKLHTDR 184
>SB_59388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 35.5 bits (78), Expect = 0.061
Identities = 15/68 (22%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 41 ISMDLVSYSEIS---DNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVP 211
I +DL+ + +++V+ + D +++V +P+ K A+ + + + ++ FG P
Sbjct: 211 IELDLMDFRNTPCKCSKRHQWVLNIIDHHSKYVTCWPLKGKNAVEVLQGLQNYCYSFGFP 270
Query: 212 KRLHSDQG 235
K++ D G
Sbjct: 271 KKIVCDNG 278
>SB_47959| Best HMM Match : rve (HMM E-Value=3e-29)
Length = 622
Score = 34.7 bits (76), Expect = 0.11
Identities = 15/68 (22%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 41 ISMDLVSYSEIS---DNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVP 211
I +DL+ + +++V+ + D +++V +P+ K A+ + + + ++ FG P
Sbjct: 246 IELDLMDFRNTPCKCSKRHQWVLNIIDHHSKYVICWPLKGKNAVEVLQGLKNYCYSFGFP 305
Query: 212 KRLHSDQG 235
K++ D G
Sbjct: 306 KKIVCDNG 313
>SB_38305| Best HMM Match : CW_binding_1 (HMM E-Value=0.4)
Length = 1145
Score = 34.7 bits (76), Expect = 0.11
Identities = 23/93 (24%), Positives = 39/93 (41%)
Frame = +3
Query: 543 NSLEKRELDVMNLMQKQLQITSSTIKNFNESIFKITYDEQIINENINRLNEYINTTKNTV 722
N E + +KQ+ +T TIKN I + +IN+ E + T +
Sbjct: 439 NMTRDSETLAQSTREKQMPVTLETIKNLANQIKNTPVNNTLINQTYESAAEGLKTAREIE 498
Query: 723 FDIKISEEISTISLQILELVTSLENDINDXLTS 821
+S+E + + L V S+EN+ N T+
Sbjct: 499 ---AVSQEAINAAEKTLSEVQSIENNTNSARTA 528
>SB_34135| Best HMM Match : rve (HMM E-Value=3e-29)
Length = 324
Score = 34.7 bits (76), Expect = 0.11
Identities = 15/68 (22%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 41 ISMDLVSYSEIS---DNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVP 211
I +DL+ + +++V+ + D +++V +P+ K A+ + + + ++ FG P
Sbjct: 165 IELDLMDFRNTPCKCSKRHQWVLNIIDHHSKYVICWPLKGKNAVEVLQGLKNYCYSFGFP 224
Query: 212 KRLHSDQG 235
K++ D G
Sbjct: 225 KKIVCDNG 232
>SB_19553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1744
Score = 34.7 bits (76), Expect = 0.11
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +2
Query: 2 MVITSQST-EPFERISMDLVSYSEISDN-----NNKYVITLQDDLTRFVQAYPIPDKEAI 163
++ T ++T EP + + ++E+S + + +Y++ + DD TRF + A
Sbjct: 1432 LITTPENTREPLQMSPLPKAPWTEVSVDFAELASKEYLLLIVDDYTRFPIVEIVSSTSAT 1491
Query: 164 TIAKQILHFXQHFGVPKRLHSDQG 235
T+ ++ +GVP+ + SD G
Sbjct: 1492 TVLPKLDKVFSEYGVPEVVRSDNG 1515
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 34.7 bits (76), Expect = 0.11
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 41 ISMDLVSYSEISDNNNK---YVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVP 211
I +DL+ + +K +V+ + D +++V +P+ K A+ + + + ++ FG P
Sbjct: 887 IELDLMDFRNTPCKCSKRLQWVLNIIDHHSKYVTCWPLKGKNAVEVLQGLKNYCYSFGFP 946
Query: 212 KRLHSDQG 235
K++ D G
Sbjct: 947 KKIVCDNG 954
>SB_54416| Best HMM Match : rve (HMM E-Value=1.4e-27)
Length = 1068
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/68 (20%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +2
Query: 41 ISMDLVSYSEIS---DNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVP 211
I +DL+ + +++V+ + ++ +++V +P+ K A+ + + + ++ FG P
Sbjct: 346 IELDLMDFRNTPCKCSKRHQWVLNIIENHSKYVTCWPLKGKNAVEVLQGLKNYCYSFGFP 405
Query: 212 KRLHSDQG 235
K++ D G
Sbjct: 406 KKIVCDNG 413
>SB_16778| Best HMM Match : rve (HMM E-Value=2.9e-22)
Length = 419
Score = 34.7 bits (76), Expect = 0.11
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +2
Query: 2 MVITSQST-EPFERISMDLVSYSEISDN-----NNKYVITLQDDLTRFVQAYPIPDKEAI 163
++ T ++T EP + + ++E+S + + +Y++ + DD TRF + A
Sbjct: 231 LITTPENTREPLQMSPLPKAPWTEVSVDFAELASKEYLLLIVDDYTRFPIVEIVSSTSAT 290
Query: 164 TIAKQILHFXQHFGVPKRLHSDQG 235
T+ ++ +GVP+ + SD G
Sbjct: 291 TVLPKLDKVFSEYGVPEVVRSDNG 314
>SB_2192| Best HMM Match : rve (HMM E-Value=4e-23)
Length = 491
Score = 34.7 bits (76), Expect = 0.11
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 41 ISMDLVSYSEISDNNNK---YVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVP 211
I +DL+ + +K +V+ + D +++V +P+ K A+ + + + ++ FG P
Sbjct: 157 IELDLMDFRNTPCKCSKRLQWVLNIIDHHSKYVTCWPLKGKNAVEVLQGLKNYCYSFGFP 216
Query: 212 KRLHSDQG 235
K++ D G
Sbjct: 217 KKIVCDNG 224
>SB_8975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1002
Score = 34.3 bits (75), Expect = 0.14
Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +2
Query: 155 EAITIAKQIL-HFXQHFGVPKRLHSDQG 235
EA+T+A+ ++ H+ +GVP LHSDQG
Sbjct: 877 EAVTVAEVLVAHYISRYGVPFELHSDQG 904
>SB_37630| Best HMM Match : rve (HMM E-Value=4e-24)
Length = 442
Score = 33.9 bits (74), Expect = 0.19
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEIS---DNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILH 187
QS I MDL+ + +K+V + D T+F PI K + I
Sbjct: 181 QSERFLNLIEMDLMDFGNCPCSCSKVHKWVANIIDHHTKFCYMQPIYSKTGEEVLSVIST 240
Query: 188 FXQHFGVPKRLHSDQG 235
F +G PK+L++D G
Sbjct: 241 FCTLYGYPKKLNTDNG 256
>SB_46439| Best HMM Match : RVT_1 (HMM E-Value=4.8e-25)
Length = 1641
Score = 33.9 bits (74), Expect = 0.19
Identities = 18/69 (26%), Positives = 37/69 (53%)
Frame = +2
Query: 29 PFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGV 208
P+ +S+D ++E++ + +Y++ + DD TRF + A T+ ++ +GV
Sbjct: 1410 PWTEVSVD---FAELA--SKEYLLLIVDDYTRFPIVEIVSSTSATTVLPKLDKVFSEYGV 1464
Query: 209 PKRLHSDQG 235
P+ + SD G
Sbjct: 1465 PEVVRSDNG 1473
>SB_45729| Best HMM Match : rve (HMM E-Value=5.8e-21)
Length = 611
Score = 33.9 bits (74), Expect = 0.19
Identities = 18/69 (26%), Positives = 37/69 (53%)
Frame = +2
Query: 29 PFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGV 208
P+ +S+D ++E++ + +Y++ + DD TRF + A T+ ++ +GV
Sbjct: 327 PWTEVSVD---FAELA--SKEYLLLIVDDYTRFPIVEIVSSTSATTVLPKLDKVFSEYGV 381
Query: 209 PKRLHSDQG 235
P+ + SD G
Sbjct: 382 PEVVRSDNG 390
>SB_45323| Best HMM Match : rve (HMM E-Value=5.3e-31)
Length = 577
Score = 33.5 bits (73), Expect = 0.25
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 86 NKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVPKRLHSDQG 235
+K + + D +++V+ P+ + + H HFG+P+ L SD G
Sbjct: 272 DKMFLVVVDAYSKYVEIVPMTTANSANTISALRHIFSHFGLPEHLVSDNG 321
>SB_41979| Best HMM Match : rve (HMM E-Value=1.3e-23)
Length = 395
Score = 33.5 bits (73), Expect = 0.25
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 86 NKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVPKRLHSDQG 235
+K + + D +++V+ P+ + + H HFG+P+ L SD G
Sbjct: 195 DKMFLVVVDAYSKYVEIVPMTTANSANTISALRHIFSHFGLPEHLVSDNG 244
>SB_23869| Best HMM Match : rve (HMM E-Value=2.2e-16)
Length = 1456
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 89 KYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVPKRLHSDQG 235
KY++T+ D L++F P+ DK ++ + + VP++L +D G
Sbjct: 998 KYLLTVIDVLSKFAWVVPLKDKTGTSLVEAFTTVFRRGRVPEKLQTDDG 1046
>SB_17842| Best HMM Match : RVT_1 (HMM E-Value=2.2e-29)
Length = 1167
Score = 33.5 bits (73), Expect = 0.25
Identities = 20/77 (25%), Positives = 41/77 (53%)
Frame = +2
Query: 5 VITSQSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL 184
+IT ++ P+E + +DL S+ NN Y++T+ D T + + + ++ + +++
Sbjct: 845 LITIEAKAPWEIVGVDLFSW-----NNKDYLLTV-DYFTGYWEVDLLKKTDSPAVIRKLK 898
Query: 185 HFXQHFGVPKRLHSDQG 235
+GVP +L SD G
Sbjct: 899 QHFSRYGVPVQLVSDGG 915
>SB_6196| Best HMM Match : rve (HMM E-Value=3.7e-12)
Length = 444
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +2
Query: 155 EAITIAKQIL-HFXQHFGVPKRLHSDQ 232
EA+T+A+ ++ H+ FGVP LHSDQ
Sbjct: 140 EAVTVAEVLVAHYISRFGVPLELHSDQ 166
>SB_49099| Best HMM Match : rve (HMM E-Value=2e-08)
Length = 553
Score = 33.5 bits (73), Expect = 0.25
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 86 NKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVPKRLHSDQG 235
+K + + D +++V+ P+ + + H HFG+P+ L SD G
Sbjct: 375 DKMFLVVVDAYSKYVEIVPMTTANSANTISALRHIFSHFGLPEHLVSDNG 424
>SB_41460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1669
Score = 33.5 bits (73), Expect = 0.25
Identities = 20/77 (25%), Positives = 41/77 (53%)
Frame = +2
Query: 5 VITSQSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL 184
+IT ++ P+E + +DL S+ NN Y++T+ D T + + + ++ + +++
Sbjct: 809 LITIEAKAPWEIVGVDLFSW-----NNKDYLLTV-DYFTGYWEVDLLKKTDSPAVIRKLK 862
Query: 185 HFXQHFGVPKRLHSDQG 235
+GVP +L SD G
Sbjct: 863 QHFSRYGVPVQLVSDGG 879
>SB_19470| Best HMM Match : rve (HMM E-Value=0.0029)
Length = 347
Score = 33.1 bits (72), Expect = 0.33
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Frame = +2
Query: 5 VITSQSTEPFERISMDL---VSYSEISDNNNK-YVITLQDDLTRFVQAYPIPDKEAITIA 172
V +Q T ++ I +D + Y K YV+ LTR + +P E
Sbjct: 146 VTRTQGTSAYQVIGVDFAGPIKYRVARQKEEKAYVLLYTCSLTRGIYLELLPSLETPDCL 205
Query: 173 KQILHFXQHFGVPKRLHSDQG 235
+ HF G P R++SD G
Sbjct: 206 HSLKHFISRRGRPDRIYSDNG 226
>SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2353
Score = 32.7 bits (71), Expect = 0.43
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 68 EISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQI 181
E S +Y++ + D TRF QAY +K A T+A+++
Sbjct: 1519 EKSSGGYEYILVVIDHFTRFAQAYATRNKSAPTVAEKL 1556
>SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26)
Length = 212
Score = 32.7 bits (71), Expect = 0.43
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 32 FERISMDLVSYSEISDNNN--KYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFG 205
+ R +DL +N KY++T+ D L++F P+ DK ++ +
Sbjct: 3 YPRQQVDLCDMQAFHRHNEGFKYLLTVIDLLSKFAWVVPLKDKTGASLVAAFTTVFRGDR 62
Query: 206 VPKRLHSDQG 235
VP++L +D G
Sbjct: 63 VPEKLQTDDG 72
>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
Length = 1097
Score = 32.3 bits (70), Expect = 0.57
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 77 DNNN-KYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVPKRLHSDQG 235
DN KY++T+ D L++F P+ DK ++ + + VP++L +D G
Sbjct: 383 DNEGFKYLLTVIDVLSKFTWVVPLKDKTGDSLVEAFTTVFRGGRVPEKLQTDDG 436
>SB_37044| Best HMM Match : rve (HMM E-Value=4.1e-07)
Length = 1033
Score = 32.3 bits (70), Expect = 0.57
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 89 KYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVPKRLHSDQG 235
KY++T+ D L+++ A P+ DK I + + VP++L +D G
Sbjct: 12 KYILTVIDVLSKYGWALPLKDKTGPQIVQAFTTIFKGGRVPEKLQTDDG 60
>SB_16055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 848
Score = 32.3 bits (70), Expect = 0.57
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 131 QAYPIPDKEAITIAKQILH-FXQHFGVPKRLHSDQG*ANLQPSKIQII 271
+ + + ++++ TIAK+I + G P++LHSDQG ANL I+ I
Sbjct: 570 RVWQLTNQKSETIAKRITDGWIPRHGAPEKLHSDQG-ANLNSQNIEEI 616
>SB_12331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 748
Score = 31.9 bits (69), Expect = 0.76
Identities = 15/69 (21%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = +2
Query: 41 ISMDLVSYSEIS---DNNNKYVIT-LQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGV 208
I +DL+ + + +++V+ + D +++V +P+ K A+ + + + ++ FG
Sbjct: 449 IGLDLMDFRNMPCKCSKRHQWVLNNIIDHHSKYVTCWPLKGKNAVEVLQGLKNYCYSFGF 508
Query: 209 PKRLHSDQG 235
PK++ D G
Sbjct: 509 PKKIVCDNG 517
>SB_28707| Best HMM Match : rve (HMM E-Value=0.011)
Length = 173
Score = 31.9 bits (69), Expect = 0.76
Identities = 19/77 (24%), Positives = 41/77 (53%)
Frame = +2
Query: 5 VITSQSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL 184
+IT ++ P+E + +DL S+ NN Y++T+ D + + + + ++ + +++
Sbjct: 67 LITKEAKAPWEIVGVDLFSW-----NNKDYLLTV-DYFSGYWEVDFLKKTDSPAVIRKMK 120
Query: 185 HFXQHFGVPKRLHSDQG 235
+GVP +L SD G
Sbjct: 121 QHFSRYGVPVQLVSDGG 137
>SB_31801| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1018
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +2
Query: 86 NKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVPKRLHSDQG 235
+K + + D +++V+ P+ + + H HFG+P+ L D G
Sbjct: 812 DKMFLVVVDAYSKYVEIVPMTTANSANTISALRHIFSHFGLPEHLVPDNG 861
>SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 31.5 bits (68), Expect = 1.0
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 35 ERISMDLVSYSEIS--DNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGV 208
E+ DL +S +N NKY++T+ D L+++ + DK I + +
Sbjct: 104 EQWQADLCDVQSLSSYNNGNKYLLTVIDVLSKYALVVSLKDKTGKQIVEAFESIFKGGRQ 163
Query: 209 PKRLHSDQG 235
P++L +D G
Sbjct: 164 PEKLQTDDG 172
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 77 DNNN-KYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVPKRLHSD 229
DN+ KY++T+ D L++F P+ DK ++ + + VP++L +D
Sbjct: 22 DNDGVKYLLTVIDVLSKFAWVVPLKDKTGSSLVEAFTPIFRGGRVPEKLQTD 73
>SB_36585| Best HMM Match : rve (HMM E-Value=6.2e-16)
Length = 217
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Frame = +2
Query: 5 VITSQSTEPFERISMDL---VSYSEISDNNNK-YVITLQDDLTRFVQAYPIPDKEAITIA 172
V +Q T ++ IS+D + Y K YV+ LTR + +P E
Sbjct: 4 VTRTQGTSAYQVISVDFAGPIKYRVARQKEEKAYVLLYTCSLTRGIYLDLLPSLETPDCL 63
Query: 173 KQILHFXQHFGVPKRLHSDQG 235
+ F G P R++SD G
Sbjct: 64 HSLKQFIARRGRPDRIYSDNG 84
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 30.3 bits (65), Expect = 2.3
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Frame = +3
Query: 519 AEHYNECINSLEKRELDVMNLMQKQ---LQITSSTIKNFNESIFKITYDEQIINENINRL 689
A + N L+ RE D+ N +Q Q L+ + K + I ++ Y + + I L
Sbjct: 1230 AYEFENLYNGLQDREDDLKNEIQSQANKLERLEADFKKSQKRILELQYHQGQLERKITDL 1289
Query: 690 NEYINTTKNTVFDIKISEEISTISLQILELVTSLEN 797
KN D+K + ++ LEL T +
Sbjct: 1290 ETANERLKNDKKDLKADLIAANATITDLELKTEFSD 1325
>SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12)
Length = 1290
Score = 30.3 bits (65), Expect = 2.3
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +3
Query: 390 AIIENELSELNLYLGKNSRNKRELFDGLSSV--LKRLIGTPDAQDAEHYNECINSLEKRE 563
A +E ++ + + G S E+F LSS+ L+ + P +D H C+N + R
Sbjct: 1145 ASLEEDMDAIKICTGGKSPPFAEIFSALSSLLALQESLNMPLVKD--HSYHCLNGKQPRP 1202
Query: 564 LDVMNLMQKQLQITSSTIKNFNESIFKITYDEQ 662
L L+ + + + ++ T+DE+
Sbjct: 1203 LFGKRLLYNSIDLIPFSDAILGTALCSSTFDEK 1235
>SB_54947| Best HMM Match : rve (HMM E-Value=2.3e-31)
Length = 1283
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/50 (22%), Positives = 24/50 (48%)
Frame = +2
Query: 86 NKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGVPKRLHSDQG 235
++ + + D +++V+ P+ + + H HFG+P+ SD G
Sbjct: 960 DRMFLVVVDAYSKYVEIVPMTTANSANTISALRHIFSHFGLPEHQVSDNG 1009
>SB_45442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +2
Query: 14 SQSTEPFERISMDL---VSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL 184
++ +EPF+ +D + Y S+ Y+ TR V PD A + +
Sbjct: 62 TEFSEPFDVTGVDFAGPIYYRTKSEQGKAYIALFTCAATRAVHLKLCPDLSAPNFQRALK 121
Query: 185 HFXQHFGVPKRLHSDQG 235
F G P+ + SD G
Sbjct: 122 EFVARRGCPQMIVSDNG 138
>SB_35391| Best HMM Match : rve (HMM E-Value=2.6e-14)
Length = 235
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +2
Query: 14 SQSTEPFERISMDL---VSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL 184
++ +EPF+ +D + Y S+ Y+ TR V PD A + +
Sbjct: 10 TEFSEPFDVTGVDFAGPIYYRTKSEQGKAYIALFTCAATRAVHLKLCPDLSAPNFQRALK 69
Query: 185 HFXQHFGVPKRLHSDQG 235
F G P+ + SD G
Sbjct: 70 EFVARRGCPQMIVSDNG 86
>SB_31254| Best HMM Match : rve (HMM E-Value=5.2e-15)
Length = 341
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +2
Query: 14 SQSTEPFERISMDL---VSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL 184
++ +EPF+ +D + Y S+ Y+ TR V PD A + +
Sbjct: 51 TEFSEPFDVTGVDFAGPIYYRTKSEQGKAYIALFTCAATRAVHLKLCPDLSAPNFQRALK 110
Query: 185 HFXQHFGVPKRLHSDQG 235
F G P+ + SD G
Sbjct: 111 EFVARRGCPQMIVSDNG 127
>SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1626
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +2
Query: 14 SQSTEPFERISMDL---VSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL 184
++ +EPF+ +D + Y S+ Y+ TR V PD A + +
Sbjct: 1277 TEFSEPFDVTGVDFAGPIYYRTKSEQGKAYIALFTCAATRAVHLKLCPDLSAPNFQRALK 1336
Query: 185 HFXQHFGVPKRLHSDQG 235
F G P+ + SD G
Sbjct: 1337 EFVARRGCPQMIVSDNG 1353
>SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)
Length = 1027
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +2
Query: 14 SQSTEPFERISMDL---VSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL 184
++ +EPF+ +D + Y S+ Y+ TR V PD A + +
Sbjct: 645 TEFSEPFDVTGVDFAGPIYYRTKSEQGKAYIALFTCAATRAVHLKLCPDLSAPNFQRALK 704
Query: 185 HFXQHFGVPKRLHSDQG 235
F G P+ + SD G
Sbjct: 705 EFVARRGCPQMIVSDNG 721
>SB_13977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 763
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +2
Query: 14 SQSTEPFERISMDL---VSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL 184
++ +EPF+ +D + Y S+ Y+ TR V PD A + +
Sbjct: 417 TEFSEPFDVTGVDFAGPIYYRTKSEQGKAYIALFTCAATRAVHLKLCPDLSAPNFQRALK 476
Query: 185 HFXQHFGVPKRLHSDQG 235
F G P+ + SD G
Sbjct: 477 EFVARRGCPQMIVSDNG 493
>SB_57991| Best HMM Match : rve (HMM E-Value=1.1e-10)
Length = 314
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +2
Query: 14 SQSTEPFERISMDL---VSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL 184
++ +EPF+ +D + Y S+ Y+ TR V PD A + +
Sbjct: 10 TEFSEPFDVTGVDFAGPIYYRTKSEQGKAYIALFTCAATRAVHLKLCPDLSAPNFQRALK 69
Query: 185 HFXQHFGVPKRLHSDQG 235
F G P+ + SD G
Sbjct: 70 EFVARRGCPQMIVSDNG 86
>SB_45156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +2
Query: 14 SQSTEPFERISMDL---VSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL 184
++ +EPF+ +D + Y S+ Y+ TR V PD A + +
Sbjct: 51 TEFSEPFDVTGVDFAGPIYYRTKSEQGKAYIALFTCAATRAVHLKLCPDLSAPNFQRALK 110
Query: 185 HFXQHFGVPKRLHSDQG 235
F G P+ + SD G
Sbjct: 111 EFVARRGCPQMIVSDNG 127
>SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33)
Length = 1485
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +2
Query: 14 SQSTEPFERISMDL---VSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL 184
++ +EPF+ +D + Y S+ Y+ TR V PD A + +
Sbjct: 1188 TEFSEPFDVTGVDFAGPIYYRTKSEQGKAYIALFTCAATRAVHLKLCPDLSAPNFQRALK 1247
Query: 185 HFXQHFGVPKRLHSDQG 235
F G P+ + SD G
Sbjct: 1248 EFVARRGCPQMIVSDNG 1264
>SB_32182| Best HMM Match : Ribosomal_L14 (HMM E-Value=3)
Length = 294
Score = 29.5 bits (63), Expect = 4.0
Identities = 21/78 (26%), Positives = 38/78 (48%)
Frame = +2
Query: 2 MVITSQSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQI 181
+V T P++ S DL+ +SD +YVI + D +R+ +A + +A I + +
Sbjct: 215 IVTTEMPKGPWQFCSTDLLG--PLSDG--RYVIVIIDYFSRYFEAAMLRSTKAENIIEFL 270
Query: 182 LHFXQHFGVPKRLHSDQG 235
+G P+ L +D G
Sbjct: 271 DATFARYGYPEVLRTDNG 288
>SB_30671| Best HMM Match : rve (HMM E-Value=6.2e-32)
Length = 965
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = +2
Query: 8 ITSQSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILH 187
+TS P+E + D NN+YV+ + D +R+ + I K++
Sbjct: 650 MTSLPERPWETVEADFCGPFP----NNEYVLVVTDQYSRYPEVEFITSTAIKPTRKKLKK 705
Query: 188 FXQHFGVPKRLHSDQG 235
GVPK + +D G
Sbjct: 706 MFATHGVPKVVQTDNG 721
>SB_5198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1037
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 327 KCLYTSLFTKFTNLFNILYKIAIIENELSELNLYLGKNSRN 449
K YT + + +L+ +AIIE L +L LY+ K+S++
Sbjct: 659 KHAYTVRLSNLVSASEVLHGVAIIEYPLRDLRLYVVKSSKH 699
>SB_7613| Best HMM Match : DNA_pol3_beta (HMM E-Value=4.9)
Length = 641
Score = 29.5 bits (63), Expect = 4.0
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 23 TEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAI-TIAKQILHFXQH 199
T PF+RI +D + N Y + + D ++++ I A+ TI + L F H
Sbjct: 572 TRPFQRIHIDFFH------DGNDYFLVVIDSHSKWIDVQHITSTTALRTIDELRLIFANH 625
Query: 200 FGVPKRLHSDQG 235
G+P+ + SD G
Sbjct: 626 -GLPEEVVSDNG 636
>SB_57868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 29.1 bits (62), Expect = 5.3
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +3
Query: 498 GTPDAQDAEHYNECINSLEKRELDVMNLMQKQLQITSSTIKNFNESIFKITYDEQIIN-- 671
G+ +++ + E ++SL + NLM+ Q +I + K N + Q+IN
Sbjct: 60 GSGQSEEEQIDKETVSSLSSNMVAATNLMRSQSEIIQALSKQVNALRTAVDAQAQLINAK 119
Query: 672 --ENINRLNEYINTTKNT 719
++ E TKNT
Sbjct: 120 RGTDVQEFEEIKAATKNT 137
>SB_57360| Best HMM Match : Peptidase_A17 (HMM E-Value=8.9e-29)
Length = 1354
Score = 29.1 bits (62), Expect = 5.3
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Frame = +2
Query: 5 VITSQSTEPFERISMDL---VSYSEISDNNNK-YVITLQDDLTRFVQAYPIPDKEAITIA 172
V +Q T ++ I +D + Y K YV+ LTR + +P E
Sbjct: 660 VTRTQGTSAYQVIDVDFAGPIKYRVARQKEEKAYVLLYTCSLTRGIYLDLLPSLETPDCL 719
Query: 173 KQILHFXQHFGVPKRLHSDQG 235
+ F G P R++SD G
Sbjct: 720 HSLKQFIARRGRPDRIYSDNG 740
>SB_35841| Best HMM Match : rve (HMM E-Value=0.14)
Length = 467
Score = 29.1 bits (62), Expect = 5.3
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Frame = +2
Query: 5 VITSQSTEPFERISMDL---VSYSEISDNNNK-YVITLQDDLTRFVQAYPIPDKEAITIA 172
V +Q T ++ I +D + Y K YV+ LTR + +P E
Sbjct: 275 VTRTQGTSAYQVIGVDFSGPIKYCVARQKEEKAYVLLYTCSLTRGIYLDLLPSLETPDCL 334
Query: 173 KQILHFXQHFGVPKRLHSDQG 235
+ F G P R++SD G
Sbjct: 335 HSLKQFIARRGRPDRIYSDNG 355
>SB_57523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 29.1 bits (62), Expect = 5.3
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Frame = +2
Query: 5 VITSQSTEPFERISMDL---VSYSEISDNNNK-YVITLQDDLTRFVQAYPIPDKEAITIA 172
V +Q T ++ I +D + Y K YV+ LTR + +P E
Sbjct: 294 VTRTQGTSAYQVIGVDFAGPIKYRVARQKEEKAYVLLYTCSLTRGIYLDLLPSLETPDCL 353
Query: 173 KQILHFXQHFGVPKRLHSDQG 235
+ F G P R++SD G
Sbjct: 354 HSLKQFIARRGRPDRIYSDNG 374
>SB_46458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 29.1 bits (62), Expect = 5.3
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +2
Query: 29 PFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHFGV 208
P++ ++ D + E+ D + ++ L D VQ +PD + T+ +QI G
Sbjct: 450 PWQAVASDCI---EMQDEHYLVLVDLYSDYIELVQ---LPDMSSKTLIQQIKPIFATHGT 503
Query: 209 PKRLHSDQG 235
P L SD G
Sbjct: 504 PAVLISDNG 512
>SB_4843| Best HMM Match : rve (HMM E-Value=0.0016)
Length = 145
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 29 PFERISMDLVSYSEI-SDNNNKYVITLQDDLTRFVQAYPIPDK 154
P E + MDL+ S+ S KY+ DDL+RF + DK
Sbjct: 43 PLELLHMDLMGPSQFESVGGKKYIFLTVDDLSRFTWVRFLRDK 85
>SB_32391| Best HMM Match : rve (HMM E-Value=4.9e-14)
Length = 569
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Frame = +2
Query: 14 SQSTEPFERISMDL---VSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQIL 184
++ +EPF+ +D + Y S Y+ TR V PD A + +
Sbjct: 400 TEFSEPFDVTGVDFAGPIYYRTKSKQGKAYIALFTCAATRAVHLKLCPDLSAPNFQRALK 459
Query: 185 HFXQHFGVPKRLHSDQG 235
F G P+ + SD G
Sbjct: 460 EFVARRGCPQMIVSDNG 476
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 28.7 bits (61), Expect = 7.1
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Frame = +3
Query: 525 HYNECINSLEKRELDVMNLMQKQLQITSSTIKNFNESIFKITYDEQIINENINRLN---- 692
H C+N E + N +QKQL + +F + ++T ++ N R N
Sbjct: 2871 HTEVCLNDSENTKEPGYNGIQKQLAKLKALANSFEGHVAQLTDVREMFNRVRERCNSESR 2930
Query: 693 -------EYINTTKNTVFDIKISEEISTISLQILELVTSLENDINDXLTSILXAK 836
++++ ++V D +ISE++ +I E TS ++D +T + A+
Sbjct: 2931 TDLSDRLKFLDNRWHSVRD-QISEKVQAAEAEISEW-TSYNQQLDDMITELRNAE 2983
>SB_53335| Best HMM Match : rve (HMM E-Value=9.1e-18)
Length = 214
Score = 28.7 bits (61), Expect = 7.1
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +2
Query: 74 SDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQI 181
+D KY +T+ D +R+ A+P+ K A +++++
Sbjct: 43 TDRGYKYALTVVDVASRYKAAHPLRTKSAAAVSREL 78
>SB_46011| Best HMM Match : DNA_ligase_ZBD (HMM E-Value=2.9)
Length = 373
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 151 QRSNHYC*TNLTFXPTLRCSKATSFRPRIGQSTAIQNTNYF 273
Q + HYC T L P + S P + + A QNT Y+
Sbjct: 17 QNTRHYCPTLLVKTPGITAQYCLSKYPVLLPNIACQNTRYY 57
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 151 QRSNHYC*TNLTFXPTLRCSKATSFRPRIGQSTAIQNTNYF 273
Q + HYC T L P + S P + + A QNT ++
Sbjct: 250 QNTRHYCPTLLVKTPGITAQYCLSKHPALLPNIAYQNTRHY 290
>SB_36211| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1020
Score = 25.0 bits (52), Expect(2) = 7.5
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 155 EAITIAKQILH-FXQHFGVPKRLHSDQG 235
E ++A+++ + + FG P R+H DQG
Sbjct: 604 EKSSVAEKLYNDYIMRFGFPLRIHHDQG 631
Score = 21.8 bits (44), Expect(2) = 7.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 17 QSTEPFERISMDLVSYSEIS 76
Q+T PFE IS+D + + S
Sbjct: 588 QTTAPFELISLDFLHLEKSS 607
>SB_37558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 23 TEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHF 202
T P+E +S D+ EI N Y++T+ + +++ + D A T+ ++ +
Sbjct: 34 TRPWEIVSQDIC---EIDKQN--YLVTVCH-FSDWIEVDKLEDTLAPTVIEKTQAHFARY 87
Query: 203 GVPKRLHSDQG 235
G+P H+D G
Sbjct: 88 GIPVNCHTDNG 98
>SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019)
Length = 1136
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 510 AQDAEHYNECINSLEKRELDVMNLMQKQLQITSST 614
A+ EHYN+ IN L+ R NL K + T
Sbjct: 450 AEIEEHYNKIINDLQNRTKKTQNLADKAWEKVQET 484
>SB_34460| Best HMM Match : Borrelia_orfA (HMM E-Value=0.3)
Length = 1102
Score = 28.3 bits (60), Expect = 9.3
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Frame = +3
Query: 384 KIAIIENE----LSELNLYLGKNSRNKRELFDGLSSVLKRLIGTPDAQDAEHYNECINSL 551
K+ I NE ++ELN L K + R++ L+ + +L P +D + N +
Sbjct: 737 KLEKIHNERQMTITELNKILDKVAIQHRDMESKLTGEITQL--KPKEEDLKKENMDLAKR 794
Query: 552 EKRELDVMNLMQKQLQITSSTIKNFNESIFKITYDEQIINENINRLNEYINTTKNTVFDI 731
+M+K++Q +S+ N+ I T +NE + L + T T D+
Sbjct: 795 IDHMTWKSEMMEKKMQDMASSSLMMNKVITTTTDSINDLNEEMTELKIQLETGFETEQDL 854
Query: 732 KIS 740
+ S
Sbjct: 855 RTS 857
>SB_18201| Best HMM Match : rve (HMM E-Value=3.6e-21)
Length = 322
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = +2
Query: 23 TEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHF 202
T P ++ V+ S+ + ++ + L D + +++ +PD + T+ +Q+
Sbjct: 80 THPIPQLPWQAVA-SDCLEVQGEHYLVLVDLYSDYIELVQLPDMSSKTLIQQMKPIFATH 138
Query: 203 GVPKRLHSDQG 235
G P L SD G
Sbjct: 139 GTPAVLISDNG 149
>SB_144| Best HMM Match : rve (HMM E-Value=3.6e-21)
Length = 887
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = +2
Query: 23 TEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHF 202
T P ++ V+ S+ + ++ + L D + +++ +PD + T+ +Q+
Sbjct: 645 THPIPQLPWQAVA-SDCLEVQGEHYLVLVDLYSDYIELVQLPDMSSKTLIQQMKPIFATH 703
Query: 203 GVPKRLHSDQG 235
G P L SD G
Sbjct: 704 GTPAVLISDNG 714
>SB_57521| Best HMM Match : rve (HMM E-Value=0.13)
Length = 1105
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 23 TEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHF 202
T P+E +S D+ EI N Y++T+ + +++ + D A T+ ++ +
Sbjct: 804 TRPWEIVSQDIC---EIDKQN--YLVTVCH-FSDWIEVDKLEDTLAPTVIEKTQAHFARY 857
Query: 203 GVPKRLHSDQG 235
G+P H+D G
Sbjct: 858 GIPVNCHTDNG 868
>SB_52460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = +2
Query: 23 TEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHF 202
T P ++ V+ S+ + ++ + L D + +++ +PD + T+ +Q+
Sbjct: 12 THPIPQLPWQAVA-SDCLEVQGEHYLVLVDLYSDYIELVKLPDMSSKTLIQQMKPIFATH 70
Query: 203 GVPKRLHSDQG 235
G P L SD G
Sbjct: 71 GTPAILISDNG 81
>SB_51361| Best HMM Match : rve (HMM E-Value=6.4e-14)
Length = 162
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 23 TEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHFXQHF 202
T P+E +S D+ EI N Y++T+ + +++ + D A T+ ++ +
Sbjct: 34 TRPWEIVSQDIC---EIDKQN--YLVTVCH-FSDWIEVDKLEDTLAPTVIEKTQAHFARY 87
Query: 203 GVPKRLHSDQG 235
G+P H+D G
Sbjct: 88 GIPVNCHTDNG 98
>SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1787
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = +2
Query: 11 TSQSTEPFERISMDLVSYSEISDNNNKYVITLQDDLTRFVQAYPIPDKEAITIAKQILHF 190
T ++P+E IS D D + Y + + D +R+ +P + ++I +
Sbjct: 1111 TQIPSKPWETISTDFGG--PYPDGH--YNLVVIDKRSRYPVVERVPSTSLGPVKERIKNI 1166
Query: 191 XQHFGVPKRLHSDQG 235
+G PKR+ SD G
Sbjct: 1167 FATYGTPKRVESDNG 1181
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,270,398
Number of Sequences: 59808
Number of extensions: 432275
Number of successful extensions: 1424
Number of sequences better than 10.0: 129
Number of HSP's better than 10.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2693287426
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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