Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_K24
         (903 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0994 + 10071081-10072163,10072704-10074530,10074977-10075054     32   0.54 
10_08_0104 + 14824122-14824178,14824274-14824318,14824419-148245...    29   6.7  
08_02_0265 - 15012662-15013918                                         28   8.8  

>08_01_0994 + 10071081-10072163,10072704-10074530,10074977-10075054
          Length = 995

 Score = 32.3 bits (70), Expect = 0.54
 Identities = 17/37 (45%), Positives = 23/37 (62%)
 Frame = -1

Query: 852 KNVXNLXHLNGEGGAK*IDIKQLFCYLTKLIYXKLFK 742
           +N+ NL HL+  G ++  D KQ+F  LTKL Y  L K
Sbjct: 609 RNLKNLVHLDLSGCSRVQDFKQVFGGLTKLQYLNLSK 645


>10_08_0104 +
           14824122-14824178,14824274-14824318,14824419-14824536,
           14825522-14825581,14825783-14825891,14825972-14826197,
           14826274-14826390,14826510-14826611
          Length = 277

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = -1

Query: 180 KTTLGSARQHAFRYEVVNFFAPEHVDVGIFRQEXKGTIISLTFLTRAHAMTPRN 19
           KT + + +QH F     + F+ ++ D+ +FR   + T +  TF+ R   +  +N
Sbjct: 139 KTLVEAVKQHFF---AEHLFSDQYQDMPLFRWRLRHTYVDSTFMERVKEIEVKN 189


>08_02_0265 - 15012662-15013918
          Length = 418

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -2

Query: 542 QLHSTHSHHIIRKIPLELDTSLTANDAHRLDASEGYHE 429
           ++  T +   + ++ LE D  L   D HR     GYHE
Sbjct: 232 EMDLTRTSRFVARVLLECDGRLLMADRHRHGGDAGYHE 269


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,478,788
Number of Sequences: 37544
Number of extensions: 348007
Number of successful extensions: 776
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)