Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_K19
         (662 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75553-5|CAA99950.2|  533|Caenorhabditis elegans Hypothetical pr...    29   2.2  
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z83111-1|CAB05532.1|  331|Caenorhabditis elegans Hypothetical pr...    29   3.9  

>Z75553-5|CAA99950.2|  533|Caenorhabditis elegans Hypothetical
           protein ZC443.5 protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 25/70 (35%), Positives = 32/70 (45%)
 Frame = +1

Query: 352 VKRKEITLPSLKTFLPDSQNLNWTLKELLIWLKDNLLVEREELFLKDDSVRPGILVLINE 531
           +KR    L   KT L DS+ L    K +L   K +   +R    L+D  V P  LVL + 
Sbjct: 407 LKRHGGCLQYHKTMLGDSEQLLKAFKTVLTERKYSENAQRLARILRDQPVSPKDLVLKHC 466

Query: 532 EDWELHGQLN 561
           E    HG LN
Sbjct: 467 EFAVEHGALN 476


>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical protein
            C06E1.10 protein.
          Length = 1148

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +1

Query: 334  ELLFNKVKRKEITL-PSLKTFLPDSQNLNWTLKELLIWLKDNL 459
            E+L NK+  KE+T   SLK      +N NW L+E L W+ +++
Sbjct: 1082 EMLLNKLIEKEVTTRSSLKEQW--LKNENWLLEEYLEWVPESV 1122


>Z83111-1|CAB05532.1|  331|Caenorhabditis elegans Hypothetical
           protein F57G8.1 protein.
          Length = 331

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
 Frame = -1

Query: 101 RNCSRIINLV*KYLYS---IIQIFLTM*NLT 18
           R+CSR+I +V  Y+YS   II +FL + N T
Sbjct: 133 RSCSRVIYIVIHYMYSAAYIIPVFLNILNQT 163


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,777,270
Number of Sequences: 27780
Number of extensions: 266522
Number of successful extensions: 527
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)