Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_K16
         (861 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    25   0.77 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.3  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.3  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   4.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   4.1  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.5  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 419 VNGDNASPLWKYLKHKQGGTLGSFIKW 499
           VN  N  PL  YLKH+Q G    +  W
Sbjct: 323 VNAFNVDPL--YLKHEQQGAAPDYRHW 347


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 574 IQRVSIGAVAFNWNSI 527
           IQR  IG + F W SI
Sbjct: 71  IQRGEIGRITFGWTSI 86


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 574 IQRVSIGAVAFNWNSI 527
           IQR  IG + F W SI
Sbjct: 71  IQRGEIGRITFGWTSI 86


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 574 IQRVSIGAVAFNWNSI 527
           IQR  IG + F W SI
Sbjct: 71  IQRGEIGRITFGWTSI 86


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 368 KLSLLDCQALDQQTDYKGKPECGD 297
           KLS  + + +D++    GKP+C D
Sbjct: 113 KLSCGNGECIDKELFCNGKPDCKD 136


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 368 KLSLLDCQALDQQTDYKGKPECGD 297
           KLS  + + +D++    GKP+C D
Sbjct: 120 KLSCGNGECIDKELFCNGKPDCKD 143


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 296 LCSLRIVHRAHSIVCNCSQ 240
           L  L IVH  H+ +CN  Q
Sbjct: 208 LALLDIVHGVHNELCNLCQ 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,066
Number of Sequences: 336
Number of extensions: 4509
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)