Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_K11
(515 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a ... 186 3e-47
BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a ... 186 3e-47
BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a ... 186 3e-47
BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a ... 186 3e-47
AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein. 186 3e-47
AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein. 186 3e-47
X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a pr... 185 7e-47
BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a ... 183 3e-46
X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homolog... 178 8e-45
BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for MG... 36 0.084
U88836-1|AAD00655.1| 994|Homo sapiens translational activator G... 31 3.2
U77700-1|AAC51648.1| 1928|Homo sapiens HsGCN1 protein. 31 3.2
D86973-1|BAA13209.2| 2675|Homo sapiens KIAA0219 protein. 31 3.2
AC004812-3|AAC83183.1| 2392|Homo sapiens WUGSC:H_267D11.3 protein. 31 3.2
>BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 186 bits (454), Expect = 3e-47
Identities = 85/98 (86%), Positives = 92/98 (93%), Gaps = 1/98 (1%)
Frame = +2
Query: 140 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 316
VIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W N
Sbjct: 33 VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNN 92
Query: 317 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 430
LLPSRQFG++VLTTS GIMDHEEARRKH GGKILGFFF
Sbjct: 93 LLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +1
Query: 43 MVRXNVLSDALKSIHNAEKRGKRQVLIRP 129
MVR NVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRP 29
>BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 186 bits (454), Expect = 3e-47
Identities = 85/98 (86%), Positives = 92/98 (93%), Gaps = 1/98 (1%)
Frame = +2
Query: 140 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 316
VIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W N
Sbjct: 33 VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNN 92
Query: 317 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 430
LLPSRQFG++VLTTS GIMDHEEARRKH GGKILGFFF
Sbjct: 93 LLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +1
Query: 43 MVRXNVLSDALKSIHNAEKRGKRQVLIRP 129
MVR NVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRP 29
>BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 186 bits (454), Expect = 3e-47
Identities = 85/98 (86%), Positives = 92/98 (93%), Gaps = 1/98 (1%)
Frame = +2
Query: 140 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 316
VIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W N
Sbjct: 33 VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNN 92
Query: 317 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 430
LLPSRQFG++VLTTS GIMDHEEARRKH GGKILGFFF
Sbjct: 93 LLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +1
Query: 43 MVRXNVLSDALKSIHNAEKRGKRQVLIRP 129
MVR NVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRP 29
>BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 186 bits (454), Expect = 3e-47
Identities = 85/98 (86%), Positives = 92/98 (93%), Gaps = 1/98 (1%)
Frame = +2
Query: 140 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 316
VIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W N
Sbjct: 33 VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNN 92
Query: 317 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 430
LLPSRQFG++VLTTS GIMDHEEARRKH GGKILGFFF
Sbjct: 93 LLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +1
Query: 43 MVRXNVLSDALKSIHNAEKRGKRQVLIRP 129
MVR NVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRP 29
>AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein.
Length = 130
Score = 186 bits (454), Expect = 3e-47
Identities = 85/98 (86%), Positives = 92/98 (93%), Gaps = 1/98 (1%)
Frame = +2
Query: 140 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 316
VIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W N
Sbjct: 33 VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNN 92
Query: 317 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 430
LLPSRQFG++VLTTS GIMDHEEARRKH GGKILGFFF
Sbjct: 93 LLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +1
Query: 43 MVRXNVLSDALKSIHNAEKRGKRQVLIRP 129
MVR NVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRP 29
>AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein.
Length = 130
Score = 186 bits (454), Expect = 3e-47
Identities = 85/98 (86%), Positives = 92/98 (93%), Gaps = 1/98 (1%)
Frame = +2
Query: 140 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 316
VIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W N
Sbjct: 33 VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNN 92
Query: 317 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 430
LLPSRQFG++VLTTS GIMDHEEARRKH GGKILGFFF
Sbjct: 93 LLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +1
Query: 43 MVRXNVLSDALKSIHNAEKRGKRQVLIRP 129
MVR NVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRP 29
>X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 185 bits (451), Expect = 7e-47
Identities = 84/98 (85%), Positives = 92/98 (93%), Gaps = 1/98 (1%)
Frame = +2
Query: 140 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 316
VIV+FLT+MMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W N
Sbjct: 33 VIVRFLTLMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNN 92
Query: 317 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 430
LLPSRQFG++VLTTS GIMDHEEARRKH GGKILGFFF
Sbjct: 93 LLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +1
Query: 43 MVRXNVLSDALKSIHNAEKRGKRQVLIRP 129
MVR NVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRP 29
>BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 183 bits (446), Expect = 3e-46
Identities = 84/98 (85%), Positives = 91/98 (92%), Gaps = 1/98 (1%)
Frame = +2
Query: 140 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 316
VIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPR DV + D+E+W N
Sbjct: 33 VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRSDVQLKDLEKWQNN 92
Query: 317 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 430
LLPSRQFG++VLTTS GIMDHEEARRKH GGKILGFFF
Sbjct: 93 LLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +1
Query: 43 MVRXNVLSDALKSIHNAEKRGKRQVLIRP 129
MVR NVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRP 29
>X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homologous
to yeast S24 protein.
Length = 129
Score = 178 bits (434), Expect = 8e-45
Identities = 81/93 (87%), Positives = 87/93 (93%), Gaps = 1/93 (1%)
Frame = +2
Query: 155 LTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSR 331
LTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSR
Sbjct: 37 LTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSR 96
Query: 332 QFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 430
QFG++VLTTS GIMDHEEARRKH GGKILGFFF
Sbjct: 97 QFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 129
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +1
Query: 43 MVRXNVLSDALKSIHNAEKRGKRQVLIRPXFQSHR 147
MVR NVL+DALKSI+NAEKRGKR+ L+ QSHR
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRRCLL-GRLQSHR 34
>BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for
MGC:88417) protein.
Length = 37
Score = 35.9 bits (79), Expect = 0.084
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +1
Query: 43 MVRXNVLSDALKSIHNAEKRGKRQVLIR 126
MV NVL+ ALKSI+N + RGK QVL R
Sbjct: 1 MVHMNVLTIALKSINNVKTRGKHQVLRR 28
>U88836-1|AAD00655.1| 994|Homo sapiens translational activator GCN1
protein.
Length = 994
Score = 30.7 bits (66), Expect = 3.2
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -3
Query: 393 LLASSWSMMPPLVVRTR*PNCREGSRLVHLSISLMGTSKRGEMTPHLFSLPVR-FTTILP 217
+L SW + + + N +H I L+G +GE P F LP + T+ILP
Sbjct: 531 VLEESWDALNAITKKLDAGNQLALIEELHKEIRLIGNESKGEHVPG-FCLPKKGVTSILP 589
Query: 216 AL*SSTISNSP 184
L ++ SP
Sbjct: 590 VLREGVLTGSP 600
>U77700-1|AAC51648.1| 1928|Homo sapiens HsGCN1 protein.
Length = 1928
Score = 30.7 bits (66), Expect = 3.2
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -3
Query: 393 LLASSWSMMPPLVVRTR*PNCREGSRLVHLSISLMGTSKRGEMTPHLFSLPVR-FTTILP 217
+L SW + + + N +H I L+G +GE P F LP + T+ILP
Sbjct: 1367 VLEESWDALNAITKKLDAGNQLALIEELHKEIRLIGNESKGEHVPG-FCLPKKGVTSILP 1425
Query: 216 AL*SSTISNSP 184
L ++ SP
Sbjct: 1426 VLREGVLTGSP 1436
>D86973-1|BAA13209.2| 2675|Homo sapiens KIAA0219 protein.
Length = 2675
Score = 30.7 bits (66), Expect = 3.2
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -3
Query: 393 LLASSWSMMPPLVVRTR*PNCREGSRLVHLSISLMGTSKRGEMTPHLFSLPVR-FTTILP 217
+L SW + + + N +H I L+G +GE P F LP + T+ILP
Sbjct: 2212 VLEESWDALNAITKKLDAGNQLALIEELHKEIRLIGNESKGEHVPG-FCLPKKGVTSILP 2270
Query: 216 AL*SSTISNSP 184
L ++ SP
Sbjct: 2271 VLREGVLTGSP 2281
>AC004812-3|AAC83183.1| 2392|Homo sapiens WUGSC:H_267D11.3 protein.
Length = 2392
Score = 30.7 bits (66), Expect = 3.2
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -3
Query: 393 LLASSWSMMPPLVVRTR*PNCREGSRLVHLSISLMGTSKRGEMTPHLFSLPVR-FTTILP 217
+L SW + + + N +H I L+G +GE P F LP + T+ILP
Sbjct: 1929 VLEESWDALNAITKKLDAGNQLALIEELHKEIRLIGNESKGEHVPG-FCLPKKGVTSILP 1987
Query: 216 AL*SSTISNSP 184
L ++ SP
Sbjct: 1988 VLREGVLTGSP 1998
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,633,680
Number of Sequences: 237096
Number of extensions: 1025446
Number of successful extensions: 1604
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1595
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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