Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_K07
         (779 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   1.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.7  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    22   4.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.4  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = -2

Query: 421 WEDHLRFNPYCIHRNIGFSECCFID--CHFDLFTTR 320
           WEDHL    + +   + F    F+     FDLF  +
Sbjct: 309 WEDHLAVKHFSVEGQLEFRALLFVPRRVPFDLFENK 344


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin
          deacetylase 2B protein.
          Length = 528

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 1  RPADDYFTLTATTCGHCGQFV 63
          RPAD+YF L  TT G C   V
Sbjct: 37 RPADEYFRL--TTEGDCRDVV 55


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin
          deacetylase 2A protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 1  RPADDYFTLTATTCGHCGQFV 63
          RPAD+YF L  TT G C   V
Sbjct: 37 RPADEYFRL--TTEGDCRDVV 55


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 667 QQHTG*TLMALYYKISTPFISMFIF 593
           ++H    +  +Y + STP++ ++IF
Sbjct: 48  KEHIFERIRTIYNQFSTPYVGIYIF 72


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 399 LNLRWSSQQNAGRELLH 449
           LN  WSSQ +   EL+H
Sbjct: 331 LNFDWSSQVSKAGELIH 347


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 645 SVXPVCCWLHEGTTLWPSSGQD 710
           S+ PV  W+H G  ++ S   D
Sbjct: 71  SLYPVLVWIHGGYFIFGSGNDD 92


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 320 PSGEKVKVTIDEAAFAKPNVPM 385
           P+G+ V   IDE ++  P  P+
Sbjct: 519 PNGDHVISLIDEISYMAPPAPL 540


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,374
Number of Sequences: 336
Number of extensions: 3975
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)