Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_K06
(824 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0567 + 30029862-30030136,30030299-30030384,30031663-300318... 127 1e-29
05_05_0237 - 23526613-23527178,23527979-23528066,23528384-235285... 119 3e-27
05_04_0342 - 20425141-20425311,20425415-20425558,20426506-204266... 118 6e-27
01_06_1593 + 38502884-38502993,38503580-38503665,38504352-385044... 118 7e-27
03_06_0443 + 33973229-33973311,33973422-33973510,33974873-339750... 114 9e-26
01_06_1141 + 34845834-34845931,34846110-34846198,34846535-348466... 113 2e-25
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 104 1e-22
07_01_0861 + 7152976-7153061,7153222-7153310,7154862-7155013,715... 103 1e-22
08_01_0005 + 47929-48201,48663-48788,49009-49054,49188-49270,496... 48 9e-06
07_01_1199 + 11391638-11391718,11393477-11393590,11393690-113938... 32 0.64
03_02_0149 + 5933134-5933207,5935039-5935267,5935370-5935468,593... 32 0.64
01_06_0480 + 29639124-29639412,29639476-29639552,29639639-296397... 32 0.64
01_05_0105 - 18155135-18155297,18155379-18155515,18155621-181557... 30 1.9
02_01_0703 + 5251901-5251950,5252783-5253554 30 2.6
10_08_0225 - 15995436-15995555,15995655-15995735,15995813-159959... 29 3.4
10_01_0015 - 187905-188432 29 4.5
10_08_0143 + 15174605-15174725,15175252-15175682 29 5.9
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 29 5.9
12_01_0170 + 1265642-1265776,1265872-1265980,1266116-1266228,126... 28 7.8
11_01_0168 + 1362890-1362961,1363059-1363167,1363302-1363414,136... 28 7.8
07_03_0617 + 19992304-19992798,19992926-19993364,19993457-199936... 28 7.8
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879... 28 7.8
>02_05_0567 +
30029862-30030136,30030299-30030384,30031663-30031811,
30032581-30032685,30032779-30032895,30033251-30033394,
30033519-30033668
Length = 341
Score = 127 bits (306), Expect = 1e-29
Identities = 59/136 (43%), Positives = 90/136 (66%)
Frame = +1
Query: 379 GMVTTLTEKVYVPVKEHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKED 558
G++ T KV +PV ++P FNFVGRILGPRG + K++E T C++++RG+GS++D +ED
Sbjct: 187 GLIVKKTMKVDIPVDKYPTFNFVGRILGPRGNSLKRVEATTDCRVLIRGRGSIKDPARED 246
Query: 559 ANRGKPNWEHLADDLHVLLTVEDTENRAKIKLARAVDEVKRLLVPQADGEDELXKRQLME 738
RGKP +EHL + LH+L+ E +L +A D ++ LL P + +D K+QL E
Sbjct: 247 MMRGKPGYEHLNEPLHILVEAELPVEIIDTRLIQARDILEDLLKPVDESQDFFKKQQLRE 306
Query: 739 LAIINGTYRDSSSKVS 786
LA++NGT R+ + S
Sbjct: 307 LAMLNGTLREEGMQRS 322
Score = 34.7 bits (76), Expect = 0.090
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 151 LVLYIGFKMCDNTNPSTQSIADYLAQLLKDRKQLAAFPNVFMHMERLLDEEIAKVRASL 327
+V + F + S Q + YLA+LL +R +L+ F V + RLL++EI +V L
Sbjct: 71 VVAPLHFDCVEQVGCSIQRLLRYLAELLAERHKLSPFIPVLPNSVRLLNQEILRVSTLL 129
>05_05_0237 -
23526613-23527178,23527979-23528066,23528384-23528527,
23528674-23528790,23528860-23528970,23530911-23531062,
23531362-23531450,23531664-23531761
Length = 454
Score = 119 bits (286), Expect = 3e-27
Identities = 51/134 (38%), Positives = 85/134 (63%)
Frame = +1
Query: 373 PEGMVTTLTEKVYVPVKEHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKK 552
P + ++ +P +P+FNF+GR+LGPRG + K++E TGC++ +RGKGS++D K
Sbjct: 130 PSSYIVKKILRLEIPTDAYPNFNFIGRLLGPRGNSLKRIEASTGCRVFIRGKGSIKDPNK 189
Query: 553 EDANRGKPNWEHLADDLHVLLTVEDTENRAKIKLARAVDEVKRLLVPQADGEDELXKRQL 732
E+ +G+ +EHL D LH+L+ E N +LA+A + ++ LL P + +D ++QL
Sbjct: 190 EEQLKGRAGYEHLDDPLHILIEAELPANVIDARLAKAQEILEELLKPVDESQDYYKRQQL 249
Query: 733 MELAIINGTYRDSS 774
ELA++N R+ S
Sbjct: 250 RELALLNSPLREES 263
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +1
Query: 193 PSTQSIADYLAQLLKDRKQLAAFPNVFMHMERLLDEEIAKVRASLFQINGV 345
P S YLA+LL++ ++L F V RLL++EI +V + +F+ GV
Sbjct: 27 PDAASGGQYLAELLQEHQKLGPFMQVLPICSRLLNQEIMRV-SGMFRQPGV 76
>05_04_0342 -
20425141-20425311,20425415-20425558,20426506-20426622,
20426719-20426835,20427533-20427678,20428208-20428293,
20428780-20428889
Length = 296
Score = 118 bits (284), Expect = 6e-27
Identities = 58/128 (45%), Positives = 86/128 (67%), Gaps = 4/128 (3%)
Frame = +1
Query: 403 KVYVPVKEHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNW 582
++ VPV ++P++NFVGR+LGPRG + K++E T C++ +RG+GS++D KED R KP +
Sbjct: 143 RIDVPVDKYPNYNFVGRLLGPRGNSLKRVEATTQCRVYIRGRGSVKDSVKEDKLRDKPGY 202
Query: 583 EHLADDLHVLLTVEDTENRAKIKLARAVDEVKRLLVP----QADGEDELXKRQLMELAII 750
EHL D LHVL+ E + ++L +AV ++ LL P Q + D K+QL ELAI+
Sbjct: 203 EHLNDPLHVLVEAEFPSDIVDVRLNQAVAILEDLLKPVSYYQDESMDYYKKQQLRELAIL 262
Query: 751 NGTYRDSS 774
NGT R+ S
Sbjct: 263 NGTLREES 270
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +1
Query: 217 YLAQLLKDRKQLAAFPNVFMHMERLLDEEIAKVRASLFQINGVKKEP 357
YLA+LL +R++LA F V RLL++EI +RAS N EP
Sbjct: 38 YLAELLAERQKLAPFMQVLPFCNRLLNQEI--LRASSLPPNPNFVEP 82
>01_06_1593 +
38502884-38502993,38503580-38503665,38504352-38504497,
38504817-38504933,38505028-38505144,38505858-38506001,
38506099-38506251
Length = 290
Score = 118 bits (283), Expect = 7e-27
Identities = 56/121 (46%), Positives = 82/121 (67%)
Frame = +1
Query: 412 VPVKEHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHL 591
VPV ++P++NFVGR+LGPRG + K++E T C++ +RG+GS++D KED R KP +EHL
Sbjct: 146 VPVDKYPNYNFVGRLLGPRGNSLKRVEASTQCRVYIRGRGSVKDSVKEDKLRDKPGYEHL 205
Query: 592 ADDLHVLLTVEDTENRAKIKLARAVDEVKRLLVPQADGEDELXKRQLMELAIINGTYRDS 771
+ LHVL+ E + +L +AV ++ LL P + D K+QL ELAI+NGT R+
Sbjct: 206 NEPLHVLVEAEFPADIIDTRLNQAVTILEDLLKPIDESMDYYKKQQLRELAILNGTLREE 265
Query: 772 S 774
S
Sbjct: 266 S 266
Score = 31.9 bits (69), Expect = 0.64
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 217 YLAQLLKDRKQLAAFPNVFMHMERLLDEEIAK 312
YLA+LL +R++LA F V RLL++EI +
Sbjct: 38 YLAELLAERQKLAPFVQVLPFCTRLLNQEILR 69
>03_06_0443 +
33973229-33973311,33973422-33973510,33974873-33975024,
33975463-33975579,33975729-33975776,33976169-33976312,
33976715-33976858
Length = 258
Score = 114 bits (274), Expect = 9e-26
Identities = 73/218 (33%), Positives = 113/218 (51%), Gaps = 22/218 (10%)
Frame = +1
Query: 187 TNPSTQSIADYLAQLLKDRKQLAAFPNVFMHMERLLDEEIAKVRASLFQ--INGVKKEPL 360
+NP T + YLA+LL + ++L F V +LL +EI +V + + +
Sbjct: 21 SNP-TDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNHGFGDFDRHRF 79
Query: 361 ILPEPEGMVTTLTEKV---YVPVKE-HPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGK 528
P P + + + P H +FNFVGRILGPRG + K++E TGC++ +RGK
Sbjct: 80 RSPSPMSSPNPRSNRSGNGFSPWNGLHQEFNFVGRILGPRGNSLKRVEASTGCRVFIRGK 139
Query: 529 GSMRDKKK----------------EDANRGKPNWEHLADDLHVLLTVEDTENRAKIKLAR 660
GS++D K ED RGKP +EHL+D LH+L+ E + +L
Sbjct: 140 GSIKDPGKVCKIWVKLLLVALLISEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRH 199
Query: 661 AVDEVKRLLVPQADGEDELXKRQLMELAIINGTYRDSS 774
A + ++ LL P + +D ++QL ELA++N T R+ S
Sbjct: 200 AQEVIEELLKPVDESQDFYKRQQLRELAMLNSTLREDS 237
>01_06_1141 +
34845834-34845931,34846110-34846198,34846535-34846686,
34847473-34847583,34847702-34847818,34847989-34848156,
34848563-34848703
Length = 291
Score = 113 bits (272), Expect = 2e-25
Identities = 53/132 (40%), Positives = 86/132 (65%), Gaps = 8/132 (6%)
Frame = +1
Query: 403 KVYVPVKEHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRD--------KKKED 558
++ VP +P FNF+GR+LGPRG + K++E TGC++ +RGKGS++D KE+
Sbjct: 140 RLEVPTDAYPHFNFIGRLLGPRGNSLKRVEASTGCRVFIRGKGSIKDPIKASLFVTFKEE 199
Query: 559 ANRGKPNWEHLADDLHVLLTVEDTENRAKIKLARAVDEVKRLLVPQADGEDELXKRQLME 738
+G+P +EHL+D H+L+ E + +LA+A + ++ LL P + +D L ++QL E
Sbjct: 200 QLKGRPGYEHLSDPTHILIEAELPADVIDTRLAQAQEILEDLLKPVEESQDFLKRQQLRE 259
Query: 739 LAIINGTYRDSS 774
LA++N TYR+ S
Sbjct: 260 LAVLNSTYREDS 271
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 193 PSTQSIADYLAQLLKDRKQLAAFPNVFMHMERLLDEEIAKVRASLFQINGVKKEPLILPE 372
PS + YLA+LL++++++ F V RLL++EI ++ A + + + + L +
Sbjct: 27 PSPGAAGQYLAELLQEQQKIGPFVQVLPICGRLLNQEIMRMSAIVSHLGVREHDRLPIAS 86
Query: 373 PEGM 384
P M
Sbjct: 87 PNQM 90
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 104 bits (249), Expect = 1e-22
Identities = 56/142 (39%), Positives = 85/142 (59%)
Frame = +1
Query: 343 VKKEPLILPEPEGMVTTLTEKVYVPVKEHPDFNFVGRILGPRGMTAKQLEQETGCKIMVR 522
+++ P P + L +K+Y+P+KE P +NF+G I+GPRG T K++E+ETG KI++R
Sbjct: 78 IRRNPAFKPPADYRPPKLQKKLYIPMKEFPGYNFIGLIIGPRGNTQKRMEKETGAKIVIR 137
Query: 523 GKGSMRDKKKEDANRGKPNWEHLADDLHVLLTVEDTENRAKIKLARAVDEVKRLLVPQAD 702
GKGS+++ K KP+ +DLHVL+ E E L A V++LL P +
Sbjct: 138 GKGSVKEGKLLQKRDMKPDPSE-NEDLHVLVEAETQE-----ALDAAAGMVEKLLTPVDE 191
Query: 703 GEDELXKRQLMELAIINGTYRD 768
+E ++QL ELA +N T RD
Sbjct: 192 VLNEHKRQQLRELAALNATIRD 213
>07_01_0861 +
7152976-7153061,7153222-7153310,7154862-7155013,
7155254-7155382,7155465-7155581,7156353-7156496,
7156749-7156851,7157471-7157565,7157953-7158096
Length = 352
Score = 103 bits (248), Expect = 1e-22
Identities = 46/97 (47%), Positives = 67/97 (69%)
Frame = +1
Query: 403 KVYVPVKEHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNW 582
++ VPV +P+FNFVGRILGPRG + K++E TGC++ +RGKGS++D KE+ +GKP +
Sbjct: 142 RMEVPVDAYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDADKEEKLKGKPGY 201
Query: 583 EHLADDLHVLLTVEDTENRAKIKLARAVDEVKRLLVP 693
EHL D LH+L+ E N +L +A + + LL P
Sbjct: 202 EHLNDPLHILIEAELPANIIDTRLRQAQEIMDELLKP 238
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 187 TNPSTQSIADYLAQLLKDRKQLAAFPNVFMHMERLLDEEIAKV 315
+NP S YL++LL + +L F V RLL++EI +V
Sbjct: 23 SNPEADS--QYLSELLAEHHKLGPFMQVLPICSRLLNQEIMRV 63
>08_01_0005 +
47929-48201,48663-48788,49009-49054,49188-49270,
49651-49728,49831-49884,50004-50138,50222-51691
Length = 754
Score = 48.0 bits (109), Expect = 9e-06
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Frame = +1
Query: 373 PEGMVTTLTE-KVYVPVKEHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKK 549
PE L E K+ +P K +P N +G ++GP K+L++ETG KI V G +K
Sbjct: 161 PEDYKPLLKETKIPLPTKTYPGHNIIGVLMGPESNAQKRLQEETGAKIRVYGIKRTNGEK 220
Query: 550 KEDANRGKPNWEHLADDLHVLLTVEDTENRAKIKLARAVDEVKRLLVPQADGEDELXKRQ 729
E + +DL++ ++ DT + K+ A A+ E+ LL P + +
Sbjct: 221 SEIHQADIGEVQGAYEDLYINVSA-DTHD--KVDAATALIEL--LLTPVSINSRAIEANA 275
Query: 730 LMELAIING 756
+ A+ +G
Sbjct: 276 TVSSAVSSG 284
>07_01_1199 +
11391638-11391718,11393477-11393590,11393690-11393826,
11393905-11394064
Length = 163
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Frame = +3
Query: 429 SRFQFRGKDSRTQRYDR-------KTAGTRNRVQNYGQRKRVDEGQEKGRCKQ 566
S F+F K +R +RYDR K ++++ Q+K + E Q++G+ KQ
Sbjct: 67 STFEFERKRNRPERYDRNVTEQTLKAISLITKIRHERQKKHITERQKQGKTKQ 119
>03_02_0149 +
5933134-5933207,5935039-5935267,5935370-5935468,
5935582-5935616,5935694-5935769,5936552-5936662,
5937001-5937087,5937302-5937395,5937489-5937606,
5938047-5938542,5939263-5939298,5940047-5940578,
5940668-5940792
Length = 703
Score = 31.9 bits (69), Expect = 0.64
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Frame = +1
Query: 367 PEPEGMVTT-------LTEKVYVPVKEHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRG 525
P PEG + + + +++ P N + GP + ETG +++RG
Sbjct: 197 PNPEGTIQSNGQAVHPFSASIFLGFHADPSLNVAAWVRGPNDQYINHIMNETGVTVVLRG 256
Query: 526 KGS 534
KGS
Sbjct: 257 KGS 259
>01_06_0480 +
29639124-29639412,29639476-29639552,29639639-29639749,
29639944-29640012,29640650-29640706,29640814-29640852,
29640957-29641061,29641158-29641240,29641333-29641414,
29641760-29641903,29641987-29642067,29642166-29642294
Length = 421
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 448 GRILGPRGMTAKQLEQETGCKIMVRG 525
GR+LGP T K +E TGC I+V+G
Sbjct: 190 GRLLGPNLSTLKAIEILTGCYILVQG 215
>01_05_0105 -
18155135-18155297,18155379-18155515,18155621-18155734,
18155768-18155806,18156838-18156993
Length = 202
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Frame = +3
Query: 429 SRFQFRGKDSRTQRYDRK-TAGTR------NRVQNYGQRKRVDEGQEKGRCKQ 566
S F+F K +R +RYDR TA T ++++ +K + E Q++G+ KQ
Sbjct: 105 STFEFERKRNRPERYDRNVTAQTLKAIPLITKIRHERHKKHITERQKQGKTKQ 157
>02_01_0703 + 5251901-5251950,5252783-5253554
Length = 273
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 355 PLILPEPEGMVTTLTEKVYVPVKEHPDFNFVGRILGPRGMTAKQLEQETGCKIMVR 522
P +P P M T + K D + G I+G G+ KQ+ + TG K+ +R
Sbjct: 126 PPPMPSP-AMSTPASFGASATAKISVDASLAGGIIGRGGVNTKQISRVTGAKLAIR 180
>10_08_0225 -
15995436-15995555,15995655-15995735,15995813-15995956,
15996305-15996386,15996479-15996561,15996655-15996759,
15996869-15996907,15997004-15997060,15997701-15997769,
15997959-15998069,15998382-15998564
Length = 357
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 451 RILGPRGMTAKQLEQETGCKIMVRG 525
R+LGP T K +E TGC I+V+G
Sbjct: 130 RLLGPNLSTLKAIEILTGCYILVQG 154
>10_01_0015 - 187905-188432
Length = 175
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 480 KTAGTRNRVQNYGQRKRVDEGQEKGRCKQGQ 572
+TA TR+ G+R+R EG+ GRC++G+
Sbjct: 85 RTASTRSERWRGGRRRR-SEGRRGGRCRRGR 114
>10_08_0143 + 15174605-15174725,15175252-15175682
Length = 183
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +1
Query: 508 KIMVRGKGSMRDKKKEDANRGKPNWEHLADDLHVLLTVEDTENRAKIKLARAV--DEVKR 681
K+ V GS+R + N G +W H + D + K++L + V +V
Sbjct: 48 KVQVEASGSLRISGERAVNGGGRHWLHFLKRFDLPPGAADDASAIKVQLDKGVLYVQVPG 107
Query: 682 LLVPQADGEDELXKRQLMELAIINGTYRDSSSK 780
P A G + ++Q E I G R ++++
Sbjct: 108 PGAPAAAGGSDGEQQQQQEGEIAGGRRRAAAAR 140
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/85 (22%), Positives = 39/85 (45%)
Frame = +1
Query: 553 EDANRGKPNWEHLADDLHVLLTVEDTENRAKIKLARAVDEVKRLLVPQADGEDELXKRQL 732
+ NR P+W D ++ E +N+A + R + +VKRL+ + + ++ +L
Sbjct: 61 DQGNRITPSWVAFTDSERLI--GEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQRDMKL 118
Query: 733 MELAIINGTYRDSSSKVSVPVNADE 807
+ I+N +D + V + E
Sbjct: 119 VPYKIVN---KDGKPYIQVKIKDGE 140
>12_01_0170 +
1265642-1265776,1265872-1265980,1266116-1266228,
1266814-1266882,1267042-1267157,1267428-1267461,
1267631-1267816,1267902-1268003
Length = 287
Score = 28.3 bits (60), Expect = 7.8
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Frame = +1
Query: 139 YYVTLVLYIGFKMCDNTN---PSTQSIADYLAQLLKDRKQLAAFPNVFMHMERLLDEEIA 309
YY +LY ++ T+ ++ QLL++ + AF N+F ++LD +
Sbjct: 187 YYTRRMLYAELQLISFTSFVGKMGTKVSSQFVQLLREDEM--AFDNLFCMAFQMLDAQWL 244
Query: 310 KVRASLFQINGVKKEPLILPEPEGMVTTLTEKVYVPVKEHPDFNFVGR 453
+AS + N V K I E E + +++ V+E P F + R
Sbjct: 245 TRQASYMEFNEVLKSMRIQLEQELTIGSIS-----CVQEMPSFRLLKR 287
>11_01_0168 +
1362890-1362961,1363059-1363167,1363302-1363414,
1364000-1364068,1364228-1364343,1364612-1364645,
1364812-1364997,1365083-1365184
Length = 266
Score = 28.3 bits (60), Expect = 7.8
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Frame = +1
Query: 139 YYVTLVLYIGFKMCDNTN---PSTQSIADYLAQLLKDRKQLAAFPNVFMHMERLLDEEIA 309
YY +LY ++ T+ ++ QLL++ + AF N+F ++LD +
Sbjct: 166 YYTRRMLYAELQLISFTSFVGKMGTKVSSQFVQLLREDEM--AFDNLFCMAFQMLDAQWL 223
Query: 310 KVRASLFQINGVKKEPLILPEPEGMVTTLTEKVYVPVKEHPDFNFVGR 453
+AS + N V K I E E + +++ V+E P F + R
Sbjct: 224 TRQASYMEFNEVLKSMRIQLEQELTIGSIS-----CVQEMPSFRLLKR 266
>07_03_0617 +
19992304-19992798,19992926-19993364,19993457-19993644,
19993806-19994123
Length = 479
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 382 MVTTLTEKVYVPVKEHPDFNFVGRILGPRGMTAKQLEQETGCKIMV-RGKGSMRDKKKED 558
MVT K+ V+ H D N+VG+ AK+L + C ++ +G G +R+ D
Sbjct: 138 MVTKCIRKMDEEVRRHIDLNWVGQKTVTVAPLAKRLTFDIICSVIFGQGAGPIREALAAD 197
>02_04_0481 + 23284296-23284448,23284553-23284753,23284855-23287971,
23288510-23289353,23289468-23290120,23290573-23290676,
23290898-23291000
Length = 1724
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +1
Query: 589 LADDLHVLLTVEDTENRAKIKLARAVDEVKRLLVPQADGEDELXKRQLMELAIINGTYRD 768
LAD L L +ED + +K ++ +E +++ + A E+EL K ELAI + D
Sbjct: 977 LADALSSLKVLEDELSNSKEYISSISEEKRQMQLHTAAVEEELEKTN-EELAIYASKFED 1035
Query: 769 SSSKVS 786
++ ++
Sbjct: 1036 ANVTIN 1041
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,194,293
Number of Sequences: 37544
Number of extensions: 461899
Number of successful extensions: 1279
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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