Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_K05
         (486 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.28 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.28 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    25   0.36 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.5  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   3.4  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 215 YVYXRVTIRPNYLALFFXNYQVTNR 289
           Y+Y  V +   +L LF  +Y+V NR
Sbjct: 221 YLYFDVIVISTFLQLFLEHYEVINR 245


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 215 YVYXRVTIRPNYLALFFXNYQVTNR 289
           Y+Y  V +   +L LF  +Y+V NR
Sbjct: 147 YLYFDVIVISTFLQLFLEHYEVINR 171


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 25.0 bits (52), Expect = 0.36
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 221 THKGTNMKCVKYLLCD*RVYSITC 150
           T K  N KCVKYL+ D      TC
Sbjct: 45  TWKCENQKCVKYLVEDEETSLATC 68


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 15   PTCPMRAVPSTTTTSCQKQCEPH 83
            P  P  A+ STTT S   + +PH
Sbjct: 1397 PHAPQIALTSTTTNSLTFKLKPH 1419


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -3

Query: 352 YQLICIIYNNMYNLKLISNLTSICYL 275
           YQL  +I NNM  + ++S  T++ ++
Sbjct: 152 YQLSVLIDNNMSYIIIVSFATNLYFI 177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,007
Number of Sequences: 336
Number of extensions: 949
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)