Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_K05
         (486 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   2.4  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           22   9.7  
AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding pr...    22   9.7  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -3

Query: 220  HIKALI*NVSNIYCVTSAYILSLVAXKRVNSVVSFMI 110
            H K  I   +N+  V ++  +SLV  + VN    F++
Sbjct: 1155 HTKETIQQPANVTMVRASNTISLVTVRHVNETSKFVV 1191


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 328 NNMYNLKLISN 296
           NN+Y L+LISN
Sbjct: 511 NNLYGLRLISN 521


>AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding
          protein protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 77 LTLLLARCCCGGRDCSHRT 21
          L LLL   C  G DCS  T
Sbjct: 11 LVLLLVTQCLDGADCSTTT 29


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 301,342
Number of Sequences: 2352
Number of extensions: 3909
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)