Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_J18
         (879 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    26   0.45 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   1.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   1.0  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   5.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   7.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   9.7  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   9.7  

>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 25.8 bits (54), Expect = 0.45
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 147 QNSKFEIMRRRQAFQTIIKIQ 209
           ++SK+ I R+R  FQT +K+Q
Sbjct: 58  KSSKYPIKRKRVRFQTRVKVQ 78


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = +2

Query: 557 ITYQVPGPITEKRSLFLAIKWLLETTDEKERTVHFPEQ 670
           I + +P    E       I W+   T   E T + PEQ
Sbjct: 93  IKFNIPDEKNEVNDFLREISWIFLETVANENTTNCPEQ 130


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 6/50 (12%)
 Frame = -1

Query: 828 IILFYCYFIRTGY------CYCHL*CAYALLASHCRCKSCFLFTTLPVLF 697
           I  FYC FI          C  H  CA+ +   H      F+F  + +LF
Sbjct: 146 IYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLF 195


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -1

Query: 534 NCNNGLQFSTALYKMSLGFNSILAFSSGVEAKWYRS 427
           NC N   + + +  +S    S   F +G+E  W +S
Sbjct: 251 NCYNNYPYYSNMDYLSSSTMSHSQFGNGLETSWGKS 286


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 250 GFEEPSNCTCEATY 291
           GF+  + CTC+A Y
Sbjct: 770 GFDSCTVCTCDAKY 783


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 461 FLLV*KPNGIVQFVS 417
           FLL+  PNG + FVS
Sbjct: 115 FLLILTPNGKIVFVS 129


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 140 TLSKLQIRNYAKATSFPDYYQNPIF 214
           TLS L    ++ +T   DYY +P++
Sbjct: 398 TLSPLPSSVHSHSTIGNDYYNSPLY 422


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,249
Number of Sequences: 336
Number of extensions: 4514
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)