Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_J13
         (866 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1507 - 30646168-30646254,30646350-30646490,30648109-306482...    28   8.4  
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125...    28   8.4  

>06_03_1507 -
           30646168-30646254,30646350-30646490,30648109-30648202,
           30648445-30648509,30648934-30649176,30649442-30649499,
           30649957-30650037,30650323-30650533,30650975-30651141,
           30651216-30651268,30651600-30651681,30651765-30651914,
           30652027-30652111,30652189-30652393,30652502-30652573,
           30652911-30653456
          Length = 779

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +3

Query: 513 NPAYFPDHTSSLEP---PYTFLERVEELWNIAKTLYNRWRLKEKEESIYENAFGPALKKR 683
           +P YF  H  S +     Y FLE    L +I +   +     +  +S  +NA GPA KKR
Sbjct: 209 SPYYFEVHAGSTKKHPSDYIFLENGNNLHDILRACSDA--TLDMLQSAIQNAIGPAPKKR 266


>04_04_0729 +
           27612106-27612195,27612284-27612370,27612469-27612528,
           27612554-27612688,27612769-27612864,27613149-27613214,
           27613647-27613864,27614093-27614189,27614605-27614691,
           27614892-27615026,27615121-27615225,27615717-27615845,
           27615925-27616028,27616598-27616688,27616774-27616857
          Length = 527

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -1

Query: 272 DFFVNQLLKVEQAIS*LASKRSLTYPSPKIM*LFPGNGKTANNLYALH 129
           DFF N ++   QA+    +K  + YP   I  +   +GK+A + Y L+
Sbjct: 151 DFFANLVVDAVQAVKTTNAKGEVKYPIKSIN-ILKAHGKSAKDSYLLN 197


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,576,944
Number of Sequences: 37544
Number of extensions: 401762
Number of successful extensions: 883
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)