Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_J13
         (866 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024759-6|AAP13761.1|  527|Caenorhabditis elegans Hypothetical ...    31   1.4  
U21324-6|AAA62562.1|  287|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z78415-3|CAB01674.1|  530|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z48717-2|CAA88604.1|  520|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U97009-12|ABR92602.1|  532|Caenorhabditis elegans Udp-glucuronos...    29   5.7  
U97009-11|AAC69026.1|  533|Caenorhabditis elegans Udp-glucuronos...    29   5.7  
Z50006-2|CAD44148.1|  523|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z50006-1|CAA90301.1|  190|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AL033514-38|CAA22111.2|  341|Caenorhabditis elegans Hypothetical...    28   7.5  
Z71177-8|CAA94866.2|  525|Caenorhabditis elegans Hypothetical pr...    28   9.9  
AF022975-1|AAB70675.3|  587|Caenorhabditis elegans Hypothetical ...    28   9.9  

>AC024759-6|AAP13761.1|  527|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.5 protein.
          Length = 527

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +1

Query: 106 ILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDM 234
           +L  +L   S YK+L   P  G SHM        +L+EA HD+
Sbjct: 7   LLLFVLPAASCYKILVSVPKFGFSHMQTMGKLADILVEAGHDV 49


>U21324-6|AAA62562.1|  287|Caenorhabditis elegans Hypothetical
           protein C35D10.6 protein.
          Length = 287

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = +3

Query: 522 YFPDHTSSLEPPYTFLERVEELWNIAKTLYNRWRLKEKEESIYENAFGPALKKRNRVLPP 701
           ++P  +   E P     RVE  WN+   +    +L+    S +E      LKK + V+P 
Sbjct: 110 HWPGSSLKSENPANKKLRVES-WNVMCEMMAEGKLRSVGVSNFEICHLEELKKDSNVVPA 168

Query: 702 YNEVKYN 722
            N+V+Y+
Sbjct: 169 VNQVEYH 175


>Z78415-3|CAB01674.1|  530|Caenorhabditis elegans Hypothetical
           protein C17G1.3a protein.
          Length = 530

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +1

Query: 91  MLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDM 234
           +L A++L ++    S YK+L      G SH+      V  L++A HD+
Sbjct: 3   LLSALLLQILFNVSSPYKILVYSNLFGHSHIKFVGSVVDTLVDAGHDV 50


>Z48717-2|CAA88604.1|  520|Caenorhabditis elegans Hypothetical
           protein T10B9.2 protein.
          Length = 520

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
 Frame = +3

Query: 321 ESLLMHPNVQKLLLDTDQTFDAVIVEWMYSDLYSGFSTVFNCPFIWSSSLEPHPMILRLI 500
           ES L     +   +D   TFD +I + ++  L +G+ T        S  L  HP I + +
Sbjct: 294 ESALGFAKTEIAKVDKQLTFDEIIGQ-LFVFLLAGYDTTALSLSYSSYLLARHPEIQKKL 352

Query: 501 DS-----LPNPAYFPDHTSSLEPPYTFLERVEELWNIAKTLYNRWRLKE 632
                   PNP    D  S L+     ++    ++ +A  ++NR  +KE
Sbjct: 353 QEEVDRECPNPEVTFDQISKLKYMECVVKEALRMYPLASIVHNRKCMKE 401


>U97009-12|ABR92602.1|  532|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein9, isoform b protein.
          Length = 532

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
 Frame = +3

Query: 348 QKLLLDT-DQTFDAVIVE-WMYSDLYSGFSTVFNCPFIWSSSLEPHPMILRLIDSLPNPA 521
           QK+L D  ++ FD ++ E +  +  Y   + +   P I   S    P+I           
Sbjct: 130 QKILNDLKNRNFDVLLAETFEIAGFY--IADLLEIPSIPLMSAVRLPIIDSAFGQPSILG 187

Query: 522 YFPDHTSSLEPPYTFLERVEELWNIAKTLYNRWRLKEKEESIYENAFG 665
           YFP   S + P   FL+R+ +L+ I        RL + +    + A G
Sbjct: 188 YFPQQYSKVAPEAGFLDRLNDLYRIFFWNLTTQRLCQFQNDFIQKAIG 235


>U97009-11|AAC69026.1|  533|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein9, isoform a protein.
          Length = 533

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
 Frame = +3

Query: 348 QKLLLDT-DQTFDAVIVE-WMYSDLYSGFSTVFNCPFIWSSSLEPHPMILRLIDSLPNPA 521
           QK+L D  ++ FD ++ E +  +  Y   + +   P I   S    P+I           
Sbjct: 131 QKILNDLKNRNFDVLLAETFEIAGFY--IADLLEIPSIPLMSAVRLPIIDSAFGQPSILG 188

Query: 522 YFPDHTSSLEPPYTFLERVEELWNIAKTLYNRWRLKEKEESIYENAFG 665
           YFP   S + P   FL+R+ +L+ I        RL + +    + A G
Sbjct: 189 YFPQQYSKVAPEAGFLDRLNDLYRIFFWNLTTQRLCQFQNDFIQKAIG 236


>Z50006-2|CAD44148.1|  523|Caenorhabditis elegans Hypothetical
           protein T07C5.1c protein.
          Length = 523

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 133 SAYKLLAVFPFPGKSHMILGEGYVRLLLEANHD 231
           +A K+L   P   KSH++L   Y  LL  A HD
Sbjct: 24  NAAKILVYCPSISKSHVLLCSKYADLLHNAGHD 56


>Z50006-1|CAA90301.1|  190|Caenorhabditis elegans Hypothetical
           protein T07C5.1b protein.
          Length = 190

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 133 SAYKLLAVFPFPGKSHMILGEGYVRLLLEANHD 231
           +A K+L   P   KSH++L   Y  LL  A HD
Sbjct: 24  NAAKILVYCPSISKSHVLLCSKYADLLHNAGHD 56


>AL033514-38|CAA22111.2|  341|Caenorhabditis elegans Hypothetical
           protein Y75B8A.33 protein.
          Length = 341

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 237 LFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMHPNVQKLLLDTDQTFDAVI 392
           LF     I  + D++D    YIV+  +  SL+   NV + +L TDQ  +  +
Sbjct: 97  LFVVSTFIGVDADINDRYSWYIVIYTLVGSLVYGWNVLRFVLWTDQKLEGFL 148


>Z71177-8|CAA94866.2|  525|Caenorhabditis elegans Hypothetical
           protein AC3.2 protein.
          Length = 525

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 91  MLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDM 234
           M   + L L L+   A K+L   P   +SH+I        L++A HD+
Sbjct: 1   MYTFLFLLLSLLAVDAGKILVYSPSISRSHLISNGRIADALVDAGHDV 48


>AF022975-1|AAB70675.3|  587|Caenorhabditis elegans Hypothetical
           protein K09C6.7 protein.
          Length = 587

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +3

Query: 516 PAYF---PDHTSSLEPPYTFLERVEELWNIAKTLYNRWRLKEKEE 641
           PAYF   P+  +S + P+      +  W I K  Y+RW  KE+++
Sbjct: 11  PAYFRKKPEKKTS-DCPHDKFSAEKAKWRIVKRKYDRWIEKERQK 54


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,273,373
Number of Sequences: 27780
Number of extensions: 376121
Number of successful extensions: 907
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)