Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_J11
         (331 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U19518-1|AAA85693.1|  132|Homo sapiens apoargC protein.                28   6.0  
U19517-1|AAA85692.1|  132|Homo sapiens apoargC protein.                28   6.0  
Y15771-1|CAA75773.1|  122|Homo sapiens immunoglobulin heavy chai...    28   8.0  
Y08408-1|CAA69684.1|  125|Homo sapiens immunoglobulin protein.         28   8.0  
X06290-1|CAA29618.1| 4548|Homo sapiens protein ( Human mRNA for ...    28   8.0  
DQ452068-1|ABF47086.1| 2040|Homo sapiens lipoprotein, Lp(a) prot...    28   8.0  
AL596089-1|CAH73590.1| 2040|Homo sapiens lipoprotein, Lp(a) prot...    28   8.0  
AL109933-1|CAI22905.1| 2040|Homo sapiens lipoprotein, Lp(a) prot...    28   8.0  

>U19518-1|AAA85693.1|  132|Homo sapiens apoargC protein.
          Length = 132

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 184 CSRPSDRSGPGCVSTDRNVRSKCRCSNVSCS 92
           C  P   +GP C +TD NVR +  C+   CS
Sbjct: 77  CRNPDCSAGPWCYTTDPNVRWE-YCNLTRCS 106


>U19517-1|AAA85692.1|  132|Homo sapiens apoargC protein.
          Length = 132

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 184 CSRPSDRSGPGCVSTDRNVRSKCRCSNVSCS 92
           C  P   +GP C +TD NVR +  C+   CS
Sbjct: 77  CRNPDCSAGPWCYTTDPNVRWE-YCNLTRCS 106


>Y15771-1|CAA75773.1|  122|Homo sapiens immunoglobulin heavy chain
           Fab fragment protein.
          Length = 122

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 163 SGPGCVSTDRNVRSKCRCSNVSCSSHY 83
           SGPG V     +   C  S+VS  SHY
Sbjct: 7   SGPGLVKPSETLSLTCTVSDVSIRSHY 33


>Y08408-1|CAA69684.1|  125|Homo sapiens immunoglobulin protein.
          Length = 125

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -1

Query: 163 SGPGCVSTDRNVRSKCRCSNVSCSSHY 83
           SGPG V     +   C  S  S SSHY
Sbjct: 7   SGPGLVKPSETLSLTCTVSGASISSHY 33


>X06290-1|CAA29618.1| 4548|Homo sapiens protein ( Human mRNA for
            apolipoprotein(a). ).
          Length = 4548

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 184  CSRPSDRSGPGCVSTDRNVRSKCRCSNVSCSSHYDAQLTAF 62
            C  P   + P C +TD +VR +  C+   CS   DA+ TAF
Sbjct: 3497 CRNPDPVAAPWCYTTDPSVRWE-YCNLTRCS---DAEWTAF 3533


>DQ452068-1|ABF47086.1| 2040|Homo sapiens lipoprotein, Lp(a) protein.
          Length = 2040

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 184  CSRPSDRSGPGCVSTDRNVRSKCRCSNVSCSSHYDAQLTAF 62
            C  P   + P C +TD +VR +  C+   CS   DA+ TAF
Sbjct: 989  CRNPDPVAAPWCYTTDPSVRWE-YCNLTRCS---DAEWTAF 1025


>AL596089-1|CAH73590.1| 2040|Homo sapiens lipoprotein, Lp(a) protein.
          Length = 2040

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 184  CSRPSDRSGPGCVSTDRNVRSKCRCSNVSCSSHYDAQLTAF 62
            C  P   + P C +TD +VR +  C+   CS   DA+ TAF
Sbjct: 989  CRNPDPVAAPWCYTTDPSVRWE-YCNLTRCS---DAEWTAF 1025


>AL109933-1|CAI22905.1| 2040|Homo sapiens lipoprotein, Lp(a) protein.
          Length = 2040

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 184  CSRPSDRSGPGCVSTDRNVRSKCRCSNVSCSSHYDAQLTAF 62
            C  P   + P C +TD +VR +  C+   CS   DA+ TAF
Sbjct: 989  CRNPDPVAAPWCYTTDPSVRWE-YCNLTRCS---DAEWTAF 1025


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,867,698
Number of Sequences: 237096
Number of extensions: 569280
Number of successful extensions: 1827
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1827
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)