Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_J07
         (361 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    26   0.10 
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    22   2.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   2.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   3.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    20   8.8  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 26.2 bits (55), Expect = 0.10
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 196 TCDEPPSHFEY*SDEIIIQ*YYFC 125
           TCDE   H  Y  D+   + YY C
Sbjct: 914 TCDEEEGHISYHPDKADCRMYYMC 937


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +1

Query: 256 WWSSLCMASDPERTTDISKHHD 321
           WW  L    DPE T  +  H D
Sbjct: 99  WWKQLEAKYDPEHTY-VKAHED 119


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 231 QHPEITSASLGPHVTNP 181
           Q P+  S S  PHV NP
Sbjct: 271 QRPKSASLSPPPHVYNP 287


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 180 QVISNISQTKLLYNNIIFALSLC*IVNYCV*QY 82
           ++  N+    L   N+++ L+LC  V Y   QY
Sbjct: 94  KIRKNLYYLLLFVINVLYVLTLCYAVYYWRQQY 126


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 149 YYTIILFLLLVYVKS*IIASNNI 81
           Y T  +FLLL++        NN+
Sbjct: 244 YTTYTIFLLLIFGSGSATPENNV 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,877
Number of Sequences: 336
Number of extensions: 1654
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)