Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_J06
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 64 2e-10
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 58 6e-09
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 43 3e-04
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 40 0.003
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 38 0.013
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 38 0.013
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 32 0.63
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 31 1.5
U29488-2|AAA68774.2| 422|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 29 5.9
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 29 5.9
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 29 5.9
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 29 5.9
Z83236-10|CAB05780.2| 236|Caenorhabditis elegans Hypothetical p... 28 7.8
U80952-5|AAB38092.1| 424|Caenorhabditis elegans Hypothetical pr... 28 7.8
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 63.7 bits (148), Expect = 2e-10
Identities = 44/135 (32%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Frame = +2
Query: 497 RITGSRPANPREWPWMASITPYGFEQYCGGVLITDRHVLTAAHCTRRWDADELY-VRLGE 673
R+ G ++P WPW + CGG LI VLTAAHC + Y VR+G
Sbjct: 57 RLIGGSESSPHSWPWTVQLLSRLGHHRCGGSLIDPNFVLTAAHCFAKDRRPTSYSVRVGG 116
Query: 674 YDLQRTNDSRSYNFKVVEKIXHPNFEL---SSYHNDIAILKLHRPXVFNTYVWPIXLPPA 844
+ R+ + V HP + + SSY D AI+++H P +T PI LP
Sbjct: 117 H---RSGSGSPHRVTAVS--IHPWYNIGFPSSY--DFAIMRIHPPVNTSTTARPICLPSL 169
Query: 845 XLDLTNEIATVIGWG 889
+ N + V GWG
Sbjct: 170 PA-VENRLCVVTGWG 183
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 58.4 bits (135), Expect = 6e-09
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Frame = +2
Query: 497 RITGSRPANPREWPWMASITPYGFE-QYCGGVLITDRHVLTAAHCTRRWDADELY-VRLG 670
R+ G P +PW A++ + +CG ++ H++TAAHC + Y V +G
Sbjct: 26 RVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVVVG 85
Query: 671 EYDLQRTNDSRSYNFKVVEKIXHPNFELSSYHNDIAILKLHRPXV-FNTYVWPIXLPPAX 847
++D +T D F + +P ++ + +DIAIL++ P + FN Y PI LP
Sbjct: 86 DWDNNQT-DGNEQIFYLQRIHFYPLYK-DIFSHDIAILEIPYPGIEFNEYAQPICLPSKD 143
Query: 848 LDLT-NEIATVIGWG 889
T V GWG
Sbjct: 144 FVYTPGRQCVVSGWG 158
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 43.2 bits (97), Expect = 3e-04
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +2
Query: 539 WMASITPYGFEQY---CGGVLITDRHVLTAAHCTRRWDADELYVRLGEYDLQRTNDSRSY 709
WMA + YG CG +I D ++TAAHC A +L R Y ++ ++R
Sbjct: 50 WMAKLVSYGDNGQGILCGATVIDDFWLVTAAHC-----ALQLQTRSFVY-VREPKNNRER 103
Query: 710 NFKVVEKIXHPNFELSSYHNDIAILKL 790
+F V E H + + NDIA+L++
Sbjct: 104 SFSVKEAYIHSGYNNQTADNDIALLRI 130
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Frame = +2
Query: 428 DEILLKINRAENRGCGL-STRAQGRITGS--RPANPREW-PWMASITPYG----FEQYCG 583
+ + + N ++ CG ST +T + NP PW I FE CG
Sbjct: 4 ENVDINSNNLDDELCGRQSTYTSFMLTDAAGNTGNPTHLAPWAVQIRVKARKGDFEVICG 63
Query: 584 GVLITDRHVLTAAHCTRR 637
G LIT +HVLTAAHC ++
Sbjct: 64 GTLITLKHVLTAAHCFQK 81
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 37.5 bits (83), Expect = 0.013
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Frame = +2
Query: 557 PYGFEQYCGGVLITDRHVLTAAHCTRRWD--ADELYVRLGEYDLQRTNDS----RSYNFK 718
P G CGGVLI V+T+AHC D A V LG+ L + +D RS+
Sbjct: 39 PDGTTNVCGGVLIAPSIVITSAHCVFSGDDFAVTAKVTLGDVHLNKHDDGEQEFRSHAMA 98
Query: 719 VVEKIXHPNFELSSYHNDIAILKLHRPXVFNTYVWPIXLPPAXLDLTNEI 868
+ +K + + S ++D+A++ L P + P+ L A L T +
Sbjct: 99 ISKKFFN---DASEANDDVAVIFL--PQRADVCHSPLSLQIAKLPSTGSV 143
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
Frame = +2
Query: 449 NRAENRGCGLSTRAQGRITGSRPANPREWPWMASITPYG--------FEQYCGGVLITDR 604
N CG + ++ +I R A E PW I Y + ++C G L + R
Sbjct: 26 NEKRLEDCGKNVKS--KIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPR 83
Query: 605 HVLTAAHCTRRWDADE 652
H+LTA HC + E
Sbjct: 84 HILTATHCAATYTETE 99
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +2
Query: 497 RITGSRPANPREWPWMASITPYGFEQY----CGGVLITDRHVLTAAHC 628
++ R A+ E PW Y ++ C G +++ RH+L A HC
Sbjct: 162 KVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHC 209
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 527 REWPWMASITPYGFEQYCGGVLITDRHVLTAAH 625
+ +PW S T G + GG +I+ H++TAAH
Sbjct: 26 KNFPWAVSFTVDGVNRL-GGSIISPYHIITAAH 57
>U29488-2|AAA68774.2| 422|Caenorhabditis elegans Hypothetical
protein C56C10.6 protein.
Length = 422
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -1
Query: 186 FSWMNRLVLPLPMCSPPFSITSRHAGSVNSEKSPSALTKATVKSNSNTRTIVDCKT 19
F+W + +P+ + P S+ S + KSP+ L+K TVK S +T+ KT
Sbjct: 299 FAWNDPFDWEMPISTTP----SKSTPSKSVTKSPAQLSKETVKKASREKTLSKEKT 350
>Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical protein
F31C3.3 protein.
Length = 2029
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 539 WMASITPYGFEQYCGGVLITDRHVLTAAH 625
WM+ +PYGF+ + G+ +T T +H
Sbjct: 1174 WMSHSSPYGFQVFSDGLQLTSSFRQTVSH 1202
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical protein
T14G10.2a protein.
Length = 1470
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -1
Query: 687 RCRSYSPSRTYNSSASHLLVQCAAVNTCRSVMRTPPQYCSNPYGVIDAIHGHSRG 523
RCRS SP+ + SS S + AA S+ P + SNPY + GH G
Sbjct: 1361 RCRSRSPASSGCSSFS-TIASIAAT----SMAAAPSAFVSNPYQHHQTVRGHVIG 1410
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -1
Query: 687 RCRSYSPSRTYNSSASHLLVQCAAVNTCRSVMRTPPQYCSNPYGVIDAIHGHSRG 523
RCRS SP+ + SS S + AA S+ P + SNPY + GH G
Sbjct: 1361 RCRSRSPASSGCSSFS-TIASIAAT----SMAAAPSAFVSNPYQHHQTVRGHVIG 1410
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -1
Query: 687 RCRSYSPSRTYNSSASHLLVQCAAVNTCRSVMRTPPQYCSNPYGVIDAIHGHSRG 523
RCRS SP+ + SS S + AA S+ P + SNPY + GH G
Sbjct: 1238 RCRSRSPASSGCSSFS-TIASIAAT----SMAAAPSAFVSNPYQHHQTVRGHVIG 1287
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -1
Query: 687 RCRSYSPSRTYNSSASHLLVQCAAVNTCRSVMRTPPQYCSNPYGVIDAIHGHSRG 523
RCRS SP+ + SS S + AA S+ P + SNPY + GH G
Sbjct: 1361 RCRSRSPASSGCSSFS-TIASIAAT----SMAAAPSAFVSNPYQHHQTVRGHVIG 1410
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -1
Query: 687 RCRSYSPSRTYNSSASHLLVQCAAVNTCRSVMRTPPQYCSNPYGVIDAIHGHSRG 523
RCRS SP+ + SS S + AA S+ P + SNPY + GH G
Sbjct: 1361 RCRSRSPASSGCSSFS-TIASIAAT----SMAAAPSAFVSNPYQHHQTVRGHVIG 1410
>Z83236-10|CAB05780.2| 236|Caenorhabditis elegans Hypothetical
protein K10H10.4 protein.
Length = 236
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = -1
Query: 657 YNSSASHLLVQCAAVNTCRSVMRTPPQYCSNPYGVIDAIHGHSRG 523
Y + L QC + C M+ PQY +P G G S G
Sbjct: 26 YACNQPQLYSQCNCPSFCSGYMQQQPQYYQSPCGYSSGCSGGSGG 70
>U80952-5|AAB38092.1| 424|Caenorhabditis elegans Hypothetical
protein F54H5.2 protein.
Length = 424
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -1
Query: 186 FSWMNRLVLPLPMCSPPFSITSRHAGSVNSEKSPSALTKATVKSNSNTRTIVDCKT 19
FSW + +P+ +PP S + KSP+ L+K T+K S +T+ KT
Sbjct: 306 FSWNDPFDWEMPISTPP---------SKSITKSPNQLSKETIKKASREKTLSKEKT 352
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,234,438
Number of Sequences: 27780
Number of extensions: 429234
Number of successful extensions: 1173
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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