Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_J02
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.25 
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   2.4  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   2.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   3.1  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   9.5  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   9.5  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   9.5  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 21/100 (21%), Positives = 40/100 (40%)
 Frame = +3

Query: 300  LTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNSK 479
            L ++   TP KR +   S   QE+D   +++   V ++          IK+++ D     
Sbjct: 837  LNSTPRSTPDKREKSPTSDKAQEADGEVVVKKE-VDEEERLENHTSVKIKREAEDR---- 891

Query: 480  SNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDH 599
                 DE +++      K++ E  P+  P     +  E H
Sbjct: 892  -----DEDERSFHSNGAKEEDEDKPSVSPLTSPRQPAETH 926


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 576 KEKNDEDHKENTDADDSINLDIGDDELLNEET 671
           KE  + +H+ +   DD  N+ + DD+    E+
Sbjct: 23  KEDEEVEHRLSDRDDDDENITVDDDDTDGRES 54


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 16/80 (20%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
 Frame = +3

Query: 444 IKQKSSDEPNSKSNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADD 623
           + Q S+   N++  ++ +       K +  DD +   +      +EK++ED +++TD   
Sbjct: 128 LTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDALVSDSD--DREKDEEDKRDDTDMHG 185

Query: 624 SI-----NLDIGDDELLNEE 668
            I       D+ DD++ +++
Sbjct: 186 RIKSERNGKDLDDDDMNDDD 205


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +3

Query: 507 KNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADDSINLDIGDDE 653
           +  R++EL DD+           +E+  E+  E+ D D     D+G+DE
Sbjct: 216 EKEREKELSDDEA----------EEEKKEEEGEDKDKDKPKIEDVGEDE 254


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 149 LFVRHRLVLFSERSYYYLSKIHTGYL 72
           +F +   V+ + R ++Y S + +GYL
Sbjct: 93  IFAKGLNVIEANRLFFYCSGLASGYL 118


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 149 LFVRHRLVLFSERSYYYLSKIHTGYL 72
           +F +   V+ + R ++Y S + +GYL
Sbjct: 93  IFAKGLNVIEANRLFFYCSGLASGYL 118


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 149 LFVRHRLVLFSERSYYYLSKIHTGYL 72
           +F +   V+ + R ++Y S + +GYL
Sbjct: 93  IFAKGLNVIEANRLFFYCSGLASGYL 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,911
Number of Sequences: 336
Number of extensions: 2490
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)