Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_J02
(690 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 36 0.007
SPCC1827.02c |||cholinephosphate cytidylyltransferase |Schizosac... 35 0.013
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 34 0.017
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 34 0.022
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 33 0.039
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 33 0.039
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 33 0.051
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.12
SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 31 0.21
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 31 0.21
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.48
SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps90... 29 0.48
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 29 0.63
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 29 0.63
SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyce... 29 0.63
SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit Air1|Schi... 28 1.1
SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual 28 1.1
SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces p... 28 1.1
SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual 28 1.1
SPCC297.03 |ssp1||serine/threonine protein kinase Ssp1 |Schizosa... 28 1.5
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 28 1.5
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 28 1.5
SPCC1223.10c |eaf1||RNA polymerase II transcription elongation f... 27 1.9
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 27 1.9
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 27 2.6
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 27 2.6
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 27 2.6
SPBC18H10.04c |sce3|tif48|translation initiation factor eIF4B|Sc... 27 3.4
SPAC1952.17c ||SPAC890.01c|GTPase activating protein|Schizosacch... 27 3.4
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 26 4.5
SPAC2F7.06c |pol4||DNA polymerase X family|Schizosaccharomyces p... 26 4.5
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 26 4.5
SPCC338.17c |rad21||kleisin|Schizosaccharomyces pombe|chr 3|||Ma... 26 4.5
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy... 26 5.9
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 26 5.9
SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces... 26 5.9
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 26 5.9
SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo... 26 5.9
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 26 5.9
SPAPB24D3.01 ||SPAPB2C8.02|transcription factor |Schizosaccharom... 25 7.8
SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 25 7.8
SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyc... 25 7.8
SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6 |Schizosaccharo... 25 7.8
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 25 7.8
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 35.5 bits (78), Expect = 0.007
Identities = 26/129 (20%), Positives = 57/129 (44%), Gaps = 5/129 (3%)
Frame = +3
Query: 252 KYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXX 431
K ++E + + K ++ D K ++ T +TE+ ++ + ++ D + D+
Sbjct: 424 KESKDENNKASLHK-DVEEKDTKITNEDTGKTETDVKAKETDSIEANDKDEKTDSKETED 482
Query: 432 XXQNIKQKSSD-EPNSKSNMEVDESDKNSRKRELKDDQETTPAK----KPCIHKEKNDED 596
+ + K +D + ++EVD+ ++ + +E D E T +K KP K +
Sbjct: 483 KVEETESKEADVKAKETDSIEVDDKEEKTDSKETADKVEQTDSKDTNEKPAKDDNKEANE 542
Query: 597 HKENTDADD 623
E D+ D
Sbjct: 543 KAEKVDSKD 551
>SPCC1827.02c |||cholinephosphate cytidylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 354
Score = 34.7 bits (76), Expect = 0.013
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 447 KQKSSDEPNSKSNMEVDESDKNSRKRELKDDQETTPAK 560
K+ + + K N E+DE ++ +K E +DD+E +P+K
Sbjct: 16 KEDNVERQTKKYNFEIDEPEEQEKKDEKEDDKEESPSK 53
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 34.3 bits (75), Expect = 0.017
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 495 DESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADDSINLDIGDDELLNEETD 674
D +D + E KDD+ ++ ++ + DED E + DD N D GDDE NE +
Sbjct: 221 DGTDDDINNNEYKDDESSSGSES-----YERDEDVDEEEEEDDDENNDEGDDEDENENDE 275
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 33.9 bits (74), Expect = 0.022
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +3
Query: 456 SSDEPNSKSNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADDSINL 635
+ E K + +E K R++ LK+D++ + P E + E +EN DAD + ++
Sbjct: 2 AKSELKRKKHQSGNEEVKEKRQKPLKNDKKIAE-ELP--QDEDDYEQEEENEDADQNTSV 58
Query: 636 DIGDDELLNEETD 674
+ +EL NE D
Sbjct: 59 ESESEELDNENED 71
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 33.1 bits (72), Expect = 0.039
Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 1/123 (0%)
Frame = +3
Query: 309 SDAKTPSKRTRRTESSLEQESDETPLMEDMIVQD-DAGXXXXXXQNIKQKSSDEPNSKSN 485
S++++ S+ + + SS + ES+ + D D+ + + S +S S
Sbjct: 243 SESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDST 302
Query: 486 MEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADDSINLDIGDDELLNE 665
+SD +S + + +TT + + N +E+T D + I D L +
Sbjct: 303 SSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSSKIHDKSLKRK 362
Query: 666 ETD 674
D
Sbjct: 363 HED 365
Score = 32.3 bits (70), Expect = 0.068
Identities = 26/127 (20%), Positives = 48/127 (37%)
Frame = +3
Query: 303 TTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNSKS 482
++SD+++ S SS S+ ED D + + SD +S S
Sbjct: 203 SSSDSESESSSEGSDSSSSSSSSESESSSED---NDSSSSSSDSESESSSEDSDSSSSSS 259
Query: 483 NMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADDSINLDIGDDELLN 662
+ E + S K+S D E + + E + D+D + + D +
Sbjct: 260 DSESESSSKDSDSSSNSSDSEDDSSSD-----SSDSESESSSEDSDSTSSSSDSDSSSSS 314
Query: 663 EETDTNT 683
E+ ++NT
Sbjct: 315 EDGNSNT 321
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 456 SSDEPNSKSNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADDS 626
SS+ S S+ DESD +S + E + + + E + ED ++ + DS
Sbjct: 99 SSEASGSGSSS--DESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDS 153
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 33.1 bits (72), Expect = 0.039
Identities = 23/120 (19%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = +3
Query: 282 TTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSS 461
TT + +++A+ S + E+ + + D+ ++ D+ + + +
Sbjct: 307 TTQQGTQNSANAEPSSSASVPAEAPETEAEQSIDVSSDIGLRSDSSKPNEAPTSSENIKA 366
Query: 462 DEPNSKSNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENT-DADDSINLD 638
D+P + + E E D + E + E+TPA + E N+ K ++ A + IN++
Sbjct: 367 DQPENSTKQENPEEDMQIKDAEEHSNLESTPAAQQTSEVEANNHQEKPSSLPAVEQINVN 426
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 32.7 bits (71), Expect = 0.051
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +3
Query: 450 QKSSDEPNSKSNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADDSI 629
++ ++E ++ + ++DES+ REL+ D K + + +N + +EN D D+ +
Sbjct: 3934 EELANEEDTANQSDLDESEA----RELESDMNGV-TKDSVVSENENSDSEEENQDLDEEV 3988
Query: 630 NLDIGDD--ELLNEE 668
N DI +D LNE+
Sbjct: 3989 N-DIPEDLSNSLNEK 4002
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +3
Query: 447 KQKSSDEPNSKSNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADDS 626
K+ + + +M+++ +D+N + + + D+ + P DED ++ DD
Sbjct: 4095 KEGDVSKDSDLEDMDMEAADENKEEADAEKDEPMQDFEDPLEENNTLDEDIQQ----DDF 4150
Query: 627 INLDIGDDELLNEE 668
+L DDE +NE+
Sbjct: 4151 SDL-AEDDEKMNED 4163
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.5 bits (68), Expect = 0.12
Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Frame = +3
Query: 318 KTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKS-SDEPNSKSNMEV 494
KT K+ +ESS ES+E I + ++ +S S+ +S+S E
Sbjct: 129 KTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEE 188
Query: 495 DESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADDS 626
+ +K K+E + + E D D +++++ S
Sbjct: 189 EVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESS 232
Score = 31.5 bits (68), Expect = 0.12
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 3/103 (2%)
Frame = +3
Query: 261 EEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQ 440
EEE K E ++ + S +ESS + +E ++E + +
Sbjct: 149 EEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKKEGSSESSSDS 208
Query: 441 NIKQKSSDE---PNSKSNMEVDESDKNSRKRELKDDQETTPAK 560
SS E +S S+ E + S ++ +KR+ + E PAK
Sbjct: 209 ESSSDSSSESGDSDSSSDSESESSSEDEKKRKAEPASEERPAK 251
>SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 215
Score = 30.7 bits (66), Expect = 0.21
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +3
Query: 552 PAKKPCIHKEKNDEDHKENTDADDSINLDIGDDELLNEE 668
P + C+H ++ND D +N ++D ++ IGDD L+++
Sbjct: 115 PRCQICVHSQRNDGD--DNLESDKFVDPFIGDDSDLDDD 151
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 30.7 bits (66), Expect = 0.21
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +3
Query: 450 QKSSDEPNSKSNMEVDESDKNSRKRELKDDQETTPAK--KPCIHKEKNDEDHKENTDADD 623
Q+ D + E +SD+NSR ++L + + K + I +N D++
Sbjct: 122 QEGGDNAKGSPSSENKDSDRNSRLQQLIEKKRNALKKEQEDLIQNSATSHSKSDNLDSES 181
Query: 624 SINLDIGDDELLNEE 668
+ + D+ D+ L+++
Sbjct: 182 ADDSDLADESELSKK 196
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 29.5 bits (63), Expect = 0.48
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Frame = +3
Query: 315 AKTPSKRTRRTESSLEQESDET--PLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNSKSNM 488
A TPS++ S + T ++ED++ +D+ +K SDE + +
Sbjct: 137 ANTPSRKGNLVPQSPRRTIATTCKGVLEDVLKKDN---------ELKFNDSDEEDEVDDE 187
Query: 489 EVDESDKNSRKRELKDDQETTPAKKPCIHKEK-NDEDHKENTDADDSINLDIGDDELLNE 665
E++ + SRK + + + KP I K+ + E + + +DD + + DE E
Sbjct: 188 EIESFNSFSRKMQTISNSRYRGSPKPNIEKQSCSSESDRVSQISDDEEDEEGSADEEDEE 247
Query: 666 ETD 674
++D
Sbjct: 248 DSD 250
Score = 26.2 bits (55), Expect = 4.5
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +3
Query: 366 ESDETPLMEDMIVQ--DDAGXXXXXXQNIKQKSSDEPNSKSNMEVDESDKNSRKRELKDD 539
+SDE ++D ++ + N + + S +PN + ESD+ S ++ DD
Sbjct: 177 DSDEEDEVDDEEIESFNSFSRKMQTISNSRYRGSPKPNIEKQSCSSESDRVS---QISDD 233
Query: 540 QETTPAKKPCIHKEKNDEDHKENTDADD 623
+E +E +D + E++ +DD
Sbjct: 234 EEDEEGSADEEDEEDSDVELSESSLSDD 261
>SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps901
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 29.5 bits (63), Expect = 0.48
Identities = 22/111 (19%), Positives = 43/111 (38%)
Frame = +3
Query: 336 TRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNSKSNMEVDESDKNS 515
T+ + EQ ++ + +I +D+ N K+ D+ S+ +++
Sbjct: 11 TKDESTVAEQRKGQSNEEKPLIDLNDSLDEQRNAYNEHCKNHDQQPSQQVRNMEDEANQY 70
Query: 516 RKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADDSINLDIGDDELLNEE 668
+ + DQE K+ + +ND EN IN I D + E+
Sbjct: 71 EQTDSSSDQEVMNEKQSLDKENRNDNIPHENNPGQQEINEPIFDFHMFLEQ 121
>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 828
Score = 29.1 bits (62), Expect = 0.63
Identities = 21/85 (24%), Positives = 33/85 (38%)
Frame = +3
Query: 297 ELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNS 476
E S PS TES + S E +++ D G + K S+ +
Sbjct: 620 EYKESSILAPSNPPFETESITD--STEIEGIKESFASTDTGLQNNSTATSENKRSESELT 677
Query: 477 KSNMEVDESDKNSRKRELKDDQETT 551
SN+ +E D+N E+ Q +T
Sbjct: 678 MSNVLSNEGDRNEEGSEINSSQPST 702
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 29.1 bits (62), Expect = 0.63
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +3
Query: 537 DQETTPAKKPCIHKEKNDEDHKENTDADDSINLDIGDDELLNEETDTNT 683
DQ+ P + KE D D + ++ + +D +DE N+E T
Sbjct: 31 DQDKNPEENVMNEKEDEDVDAVDEKSGEEDVEMDTMEDENENDEDTEQT 79
>SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 29.1 bits (62), Expect = 0.63
Identities = 16/65 (24%), Positives = 34/65 (52%)
Frame = +3
Query: 438 QNIKQKSSDEPNSKSNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDA 617
+ I ++ + S S+M+V ++ KRE+++D + T A P + K+D ++ +
Sbjct: 149 EEIDRQVQEFEKSSSDMDVQI---HTHKREIEEDDDNTSADVPLLKHSKSDHSTLYHSKS 205
Query: 618 DDSIN 632
+ S N
Sbjct: 206 EFSTN 210
>SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit
Air1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 313
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = +3
Query: 456 SSDEPNSKSNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADDSINL 635
S+ + S ++D++ + L DQ T + H + +DH +TD DS
Sbjct: 4 SNQKAESDDGSDIDDAALLQKINSLPIDQSITNSVSLEKHDFQGSDDHDSSTDLSDSTLE 63
Query: 636 DIGDDE 653
D+ E
Sbjct: 64 DVEGSE 69
>SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 28.3 bits (60), Expect = 1.1
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = +3
Query: 285 TFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSD 464
+F FE+ T T + + TESS E S E DD+ + ++ SSD
Sbjct: 230 SFVFEVPTIHVFTSTTQVH-TESSYETSSSEQ--------SDDSSSSSSCISDSEESSSD 280
Query: 465 -EPNSKSNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADDS 626
E N SN E NS + + + + K + ++DED ++N+D ++
Sbjct: 281 DELNELSN----EKKANSPTQNVDTSSKLSSVK----FQNEDDEDRRKNSDGSEA 327
>SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 608
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +3
Query: 471 NSKSNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADDSINLDIGDD 650
N+K E +NSRKR+L ++ K + + + E+ K+ DAD+ + D
Sbjct: 28 NAKKRKHSKEKPQNSRKRQLAEE-------KKSLFENSDSENEKDLIDADEFEEAETLSD 80
Query: 651 ELLNEETDT 677
+EE T
Sbjct: 81 LEHDEEPQT 89
>SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 684
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 243 RLSKYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSL-----EQESDETPLMEDMIVQ 407
++++ +E GH+ F+ + TS + S +R S L + DE P++ED
Sbjct: 614 KVNESIETNGHE--NFQKQALTSTGEQSSSNSRANPSKLFNISSDDSEDEVPIIEDTTAS 671
Query: 408 DD 413
D+
Sbjct: 672 DE 673
>SPCC297.03 |ssp1||serine/threonine protein kinase Ssp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 652
Score = 27.9 bits (59), Expect = 1.5
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = +3
Query: 333 RTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNSKSNMEVDESDKN 512
R RR ++ + S P + + +G +I +S+ +S + + V+ES K+
Sbjct: 457 RFRRPKARVFDSSSSVPSDSSICRPESSGN-----SSIGLSASELSDSFNRLAVNESQKD 511
Query: 513 SRKRELKDDQ--ETTPAKKP-CIHKEKNDEDHKENTDADDSINLDIGD 647
++++ + + KKP C + +N DADD+ + + GD
Sbjct: 512 RERKQVHPVEMGRNSSEKKPRCDFGWDYEAFPNDNQDADDACSYNTGD 559
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +3
Query: 447 KQKSSDEPNSKSNMEVDESDKNSRKRELKDDQETTPAKK 563
K+ S + S SN+ ++ +NSR+R +DD+ +++
Sbjct: 1568 KRPRSSDSQSPSNLREEDERENSRRRARQDDRRDRDSRQ 1606
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 387 MEDMIVQDDAGXXXXXXQNIKQKSSDEPNSKSNMEVDESD 506
+ D+ + D G +KQK++ K+NME DE+D
Sbjct: 193 LNDIHLFDTKGVDRRTQSELKQKANANNVEKANMEFDETD 232
>SPCC1223.10c |eaf1||RNA polymerase II transcription elongation
factor SpEAF|Schizosaccharomyces pombe|chr 3|||Manual
Length = 251
Score = 27.5 bits (58), Expect = 1.9
Identities = 21/86 (24%), Positives = 39/86 (45%)
Frame = +3
Query: 309 SDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQNIKQKSSDEPNSKSNM 488
S++K+ S+ T S+ +E E +D ++ + + K + + N + +M
Sbjct: 127 SESKSTSQSAVTTNSTRRKEK-ELEASKDGKIKPSSSNTRYPAISSKGPITTDTNDEPDM 185
Query: 489 EVDESDKNSRKRELKDDQETTPAKKP 566
EV E D +++ EL DQE P
Sbjct: 186 EVMELDDFAKELELGFDQEFNSIDDP 211
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 27.5 bits (58), Expect = 1.9
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 516 RKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADDSI 629
RK+E + ++ P P HK +DE + T + S+
Sbjct: 382 RKKEKEKEKSKAPRVTPLTHKTNDDEANHSETSSGSSL 419
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 459 SDEPNSKSNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADDSINLD 638
+DE S S+ VD S+KNS E+ + T + N E E +D++D
Sbjct: 114 ADEDASDSDDSVDSSNKNS---EVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQL 170
Query: 639 IGDDELLNEE 668
+ + E + +E
Sbjct: 171 LRELENIKQE 180
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 27.1 bits (57), Expect = 2.6
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +3
Query: 171 VIDLRAELEKRNLDKSGVRGVLIQRLSKYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTE 350
+I L LEK L K+GVR ++ S +E+ +F TT AK+ S + +
Sbjct: 52 IIYLEERLEKLKLRKNGVRKSNSEKPSVGIEKN----PSFS---TTKSAKSFSSTSSNID 104
Query: 351 SSLEQESDETPL 386
S+L+ + +TPL
Sbjct: 105 SNLDLLNYDTPL 116
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.1 bits (57), Expect = 2.6
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = +3
Query: 462 DEPNSKSNMEVDE-SDKNSRKRE----LKDDQETTPAKKPCIHKEKNDEDHKENTDADDS 626
D PN S +E DE S++ S E L DD + K+ + + ++ K N A+DS
Sbjct: 557 DSPNVASGVESDEGSEEISLDSEYSDILSDDGDFEKEKQATLPRRRSSSSMKGNKLAEDS 616
Query: 627 INLDIGDD 650
+ G D
Sbjct: 617 YLNEAGFD 624
>SPBC18H10.04c |sce3|tif48|translation initiation factor
eIF4B|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 513 SRKRELKDDQETTPAKKPCIHK-EKNDEDHKENTDADDSINLDIGDDELLNEETDT 677
S +RE ++E + ++KP K EK D K + A+ ++ +GD E + ETD+
Sbjct: 300 SFRREDNANRERSTSRKPSADKAEKTD---KTDAIAEKVSDIRLGDGEKKSSETDS 352
>SPAC1952.17c ||SPAC890.01c|GTPase activating
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 619
Score = 26.6 bits (56), Expect = 3.4
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 459 SDEPNSKSNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKND-EDHKENTDADDSINL 635
+D N +S +E S +EL D P +K +H+E + DH NT +DDS
Sbjct: 53 TDRSNWQSVLEKHRKTYTSFVQELLID----PWRKLTLHEESGENSDHPLNT-SDDSKWK 107
Query: 636 DIGDDELLNEETD 674
+ DD + E+ D
Sbjct: 108 EYFDDNQILEQID 120
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +3
Query: 504 DKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADDSINLDIGDDELLNEE 668
D+N K+E + + KN E N D I D+GDD+ L+++
Sbjct: 11 DENPGKQEESSIAVESREMSTATNNSKNIETTSSNGAEDIKIQRDVGDDKDLDDK 65
>SPAC2F7.06c |pol4||DNA polymerase X family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 506
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +3
Query: 516 RKRELKDDQETTPAKKPCIHKE-KND-EDHK-ENTDADDSI-NLDIGDDE 653
RK E+K TP+ +P H E ND E+H+ NT+ ++ + ++D D E
Sbjct: 99 RKPEMKVGSPYTPSTRPASHTEAPNDFENHETPNTENNNEVKSIDNVDQE 148
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 447 KQKSSDEPNSKSNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDA-DD 623
K + E + N+E + K S ++ +KKP + + N+E EN + ++
Sbjct: 94 KVEEKVEEFKEDNVEQEIKQKRSLSESPQESMLEKVSKKPKVSEAHNEEISPENVETIEN 153
Query: 624 SINLDI-GDDE 653
++L + G DE
Sbjct: 154 ELDLPVKGKDE 164
>SPCC338.17c |rad21||kleisin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 621 DSINLDIGDDELLNEETDTN 680
D +NLD+G D+LL +E N
Sbjct: 282 DDLNLDLGLDDLLGDEQGAN 301
>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1019
Score = 25.8 bits (54), Expect = 5.9
Identities = 19/86 (22%), Positives = 32/86 (37%)
Frame = +3
Query: 261 EEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXXXXQ 440
++EG D E SDA + +E E S+E E + +++G
Sbjct: 937 DDEGDDSVEEVSEYEASDADPSDEEEEESEEYSEDASEEDGYSESEVEDEESG---EDWD 993
Query: 441 NIKQKSSDEPNSKSNMEVDESDKNSR 518
+++K+ E E S K R
Sbjct: 994 ELERKARQEDAKHDAFEERPSKKRHR 1019
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 450 QKSSDEPNSKSNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKEN 608
QK +++P KS+++ + + RKR +++ + KKP E +DE+ E+
Sbjct: 176 QKLNNQPIEKSSVDKENA---KRKRYVEEGTKQGQKKKPLRVIELSDEETNED 225
>SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 447 KQKSSDEPNSKSNMEVDESDKNSRKRELKDDQETTPAKK 563
KQK+S S + + +S +S K L+ + + TP K+
Sbjct: 69 KQKASYSNKSPNKAPIQKSRGSSLKSHLETESQQTPVKR 107
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 25.8 bits (54), Expect = 5.9
Identities = 30/154 (19%), Positives = 65/154 (42%), Gaps = 12/154 (7%)
Frame = +3
Query: 249 SKYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXX 428
S +++ DP+++K +L + ++R R+ S + + ETP I
Sbjct: 37 SNHIKVSHFDPSSYKQKLVSV---RETQRNRKFSSLQKHLNTETPSFSVSIENPSKPSAA 93
Query: 429 XXXQNIKQKSSDEP-----NSKSNMEVDESDKN-------SRKRELKDDQETTPAKKPCI 572
++ +KS++ N SN++++ +DK KD+++ + K +
Sbjct: 94 FNDASLGKKSTEHQIDGIRNGSSNLQMEGNDKELDTDNNEDESTTFKDEEDDLISPKSYL 153
Query: 573 HKEKNDEDHKENTDADDSINLDIGDDELLNEETD 674
K K T +S N D D++ ++ ++D
Sbjct: 154 TSSKTFSYPKAPT---ESTNGDYLDEDYVDGQSD 184
>SPBC146.09c |lsd1|swm1, saf110|histone demethylase
SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1000
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/63 (20%), Positives = 31/63 (49%)
Frame = +3
Query: 444 IKQKSSDEPNSKSNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADD 623
+ Q S+ + + E + + ++D+ P K+ + E +D+D+ ++ D +D
Sbjct: 931 VAQIKSEHQRRCESQPIPEDEAKLKLLAEQEDEHLHPEKEG-MSVENSDDDYHDDLDYED 989
Query: 624 SIN 632
SI+
Sbjct: 990 SIS 992
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 25.8 bits (54), Expect = 5.9
Identities = 21/122 (17%), Positives = 49/122 (40%), Gaps = 1/122 (0%)
Frame = +3
Query: 252 KYLEEEGHDPTTFKFELTTSDAKTPSKRTRRTESSLEQESDETPLMEDMIVQDDAGXXXX 431
K ++++ + E + K S R S L + E + Q
Sbjct: 7 KSIDKDANSTEVDAAEQDAASVKINSTRASPNGSDLLNDDSEAAKITTNEKQSSPVDSHN 66
Query: 432 XXQNIKQKSSDEPNSKSNME-VDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKEN 608
N + E +++ ++ V+ +DK + +++++E A + E++DE+ +E+
Sbjct: 67 ESPNDTTINKGEDGNENEVDNVNNNDKKEDEDNVEENEEEADANEEEEEDEEDDEEDEED 126
Query: 609 TD 614
D
Sbjct: 127 ED 128
Score = 25.4 bits (53), Expect = 7.8
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 489 EVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDADD 623
EVD + N +K + +D+ E + +E+ DE+ E + D+
Sbjct: 84 EVDNVNNNDKKED-EDNVEENEEEADANEEEEEDEEDDEEDEEDE 127
>SPAPB24D3.01 ||SPAPB2C8.02|transcription factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 594
Score = 25.4 bits (53), Expect = 7.8
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 28 NKKWKFENISWLF 66
+K+W FEN+ W F
Sbjct: 174 DKEWAFENVQWYF 186
>SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Frame = +3
Query: 447 KQKSSDEPNSKSNMEVDESD-KNSRKRELKDDQETTPAKKPCIHKEKNDEDHK-----EN 608
+ ++ +E +S E DE N K+E + + + + NDE K EN
Sbjct: 33 RPRTKEEGYYESESEEDEDQILNKEKKEGQSEDMFSDTSEDEKRTLPNDEAQKRRDFIEN 92
Query: 609 TDADDSINLDIGDDELLNEETD 674
DA+ + + + E+LN+++D
Sbjct: 93 GDAERLAHKGLRNKEVLNDDSD 114
>SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 209
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Frame = +3
Query: 408 DDAGXXXXXXQNIKQKSSDEPN----SKSNMEVDESDKNSRKRELKDDQETTPAK 560
DD NI++ DE + SKS + E+ NS REL D + +K
Sbjct: 64 DDRSPINNDPYNIRRSDFDELSEYTASKSPSIISEASHNSPSRELDDSGDENTSK 118
>SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 25.4 bits (53), Expect = 7.8
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 282 SDHVPPLPNTSTGVVS-EHHEHRSCLGYVSLIR 187
SD + L N+ V EHH++RS G+V L++
Sbjct: 228 SDMLKELQNSKEIAVDLEHHDYRSFRGFVCLMQ 260
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 7.8
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 474 SKSNMEVDESDKNSRKRELKDDQETTPAKKPCIHKEKNDEDHKENTDA 617
S++ +E E+ K +K K +QE KK +KN E +K+ DA
Sbjct: 281 SQNQLENHENSKKHKKNLRKMNQEI---KKHAKEAQKNAESNKQPEDA 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,351,251
Number of Sequences: 5004
Number of extensions: 45567
Number of successful extensions: 259
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -