Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_J02
         (690 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   1.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   1.6  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   4.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   8.4  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 516 YYFYHFRQLPYWI 478
           YY+Y    LPYW+
Sbjct: 233 YYYYMREMLPYWM 245


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 516 YYFYHFRQLPYWI 478
           YY+Y    LPYW+
Sbjct: 233 YYYYMREMLPYWM 245


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 125 LFSERSYYYLSKIHTGY 75
           +FS   YY L+KIH  Y
Sbjct: 67  IFSCIGYYKLNKIHDAY 83


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +3

Query: 237 IQRLSKYLEEEGHDPTTFKFELTTSDAKTPSK 332
           ++   KY E   + P  FKF    + + TP +
Sbjct: 304 LENTLKYYEVGSNVPFNFKFITDANSSSTPEQ 335


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,229
Number of Sequences: 438
Number of extensions: 2948
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)