Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_I24
         (945 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    30   2.8  
Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AL021483-7|CAA16344.3|  218|Caenorhabditis elegans Hypothetical ...    29   4.8  
Z72509-3|CAA96647.1|  129|Caenorhabditis elegans Hypothetical pr...    29   6.4  
Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +2

Query: 749  TFGESKETLDNQ*SVPASTSSGTLQC*SATESGASPVHAAVLGTTPSYLTRRSXEVHPP 925
            T G +  T+    +V  STSSG+     +TE  +SP+ +    T PS  +  S     P
Sbjct: 933  TPGSTGSTVTQPSTVSDSTSSGSTVTVGSTEGSSSPIPSTSQNTNPSTSSGSSMSTQTP 991


>Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical
           protein C33D9.8 protein.
          Length = 604

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +3

Query: 684 ETSEEGKKRKTQISTVIQSDWQLLENQRRHSTINRVFRRALAVAPYNAEV 833
           +  +E + R TQI+ V Q + +L+  +   + I +V   + AVA  NA++
Sbjct: 372 DQKDEWQPRNTQITQVTQLNPKLIFGESEQTLIEKVKNNSKAVASLNAQL 421


>AL021483-7|CAA16344.3|  218|Caenorhabditis elegans Hypothetical
           protein Y38H8A.5 protein.
          Length = 218

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +2

Query: 146 NLSYSMFVFE*SRCGTCHTCLV*FCIYFHFK 238
           NL++ MF  E  +  TCH C   FC  F  K
Sbjct: 178 NLAFHMFTHEEHKPFTCHVCSKGFCRNFDLK 208


>Z72509-3|CAA96647.1|  129|Caenorhabditis elegans Hypothetical
           protein F32G8.3 protein.
          Length = 129

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 22/77 (28%), Positives = 32/77 (41%)
 Frame = -2

Query: 938 WGTGPGGAPRAIGGSGRMASSQVLQREQDSRQIQ*HFSIVRCHC*CSPEHSIDCRVSPLI 759
           WG GPGG     GG G        Q+  +    + H +        + +   +C+ S + 
Sbjct: 32  WGGGPGGWG---GGPGGWQQPGFQQKNWNKNMNRNHIA--------AKQDQYNCQTSGIN 80

Query: 758 LQKLPI*LYNCTDLGFS 708
           L  LPI  YNC + G S
Sbjct: 81  LIGLPISSYNCRNSGMS 97


>Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical
           protein C34C6.4 protein.
          Length = 599

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -3

Query: 475 FHCQLSVVH---KSDNLCKTYQIHVSSMYSRSK 386
           FH   S VH   +++  C  YQ+HV  M S+SK
Sbjct: 409 FHFLPSTVHDDGRTNGTCHGYQVHVGPMRSQSK 441


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,222,312
Number of Sequences: 27780
Number of extensions: 462799
Number of successful extensions: 1587
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1585
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)