Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_I19
         (842 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U26648-1|AAC71078.1|  301|Homo sapiens syntaxin 5 protein.             80   1e-14
BX537426-1|CAD97668.1|  355|Homo sapiens hypothetical protein pr...    80   1e-14
BT019647-1|AAV38453.1|  301|Homo sapiens syntaxin 5A protein.          80   1e-14
BT019646-1|AAV38452.1|  301|Homo sapiens syntaxin 5A protein.          80   1e-14
BC012137-1|AAH12137.2|  355|Homo sapiens syntaxin 5 protein.           80   1e-14
BC002645-1|AAH02645.1|  267|Homo sapiens STX5 protein protein.         80   1e-14
AY005130-1|AAF89088.1|  666|Homo sapiens frizzled-3 protein.           31   6.9  
AJ272427-1|CAB89114.1|  666|Homo sapiens frizzled homolog 3 prot...    31   6.9  
AB039723-1|BAA94968.1|  666|Homo sapiens WNT receptor frizzled-3...    31   6.9  

>U26648-1|AAC71078.1|  301|Homo sapiens syntaxin 5 protein.
          Length = 301

 Score = 79.8 bits (188), Expect = 1e-14
 Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
 Frame = +1

Query: 433 MASRDRTSEFISTVRSLQGRF----LNKPTVRDDRKAAVLETYSQFMSMAKVISKNITST 600
           M+ RDRT EF+S  +SLQ R      NKP +R  R+       S+F  MAK I K++++T
Sbjct: 1   MSCRDRTQEFLSACKSLQTRQNGIQTNKPALRAVRQR------SEFTLMAKRIGKDLSNT 54

Query: 601 YTXXXXXXXXXXXXXXFDDRPTEIQELTYIIKGDLNSLNQQIARLGEMPRGXXXXX---- 768
           +               FDD+  EI+ELTYIIK D+NSLN+QIA+L +  R          
Sbjct: 55  FAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHL 114

Query: 769 -XXXXXXXLALQSRLAS 816
                   ++LQS+LAS
Sbjct: 115 QTHSNTIVVSLQSKLAS 131


>BX537426-1|CAD97668.1|  355|Homo sapiens hypothetical protein
           protein.
          Length = 355

 Score = 79.8 bits (188), Expect = 1e-14
 Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
 Frame = +1

Query: 433 MASRDRTSEFISTVRSLQGRF----LNKPTVRDDRKAAVLETYSQFMSMAKVISKNITST 600
           M+ RDRT EF+S  +SLQ R      NKP +R  R+       S+F  MAK I K++++T
Sbjct: 55  MSCRDRTQEFLSACKSLQTRQNGIQTNKPALRAVRQR------SEFTLMAKRIGKDLSNT 108

Query: 601 YTXXXXXXXXXXXXXXFDDRPTEIQELTYIIKGDLNSLNQQIARLGEMPRGXXXXX---- 768
           +               FDD+  EI+ELTYIIK D+NSLN+QIA+L +  R          
Sbjct: 109 FAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHL 168

Query: 769 -XXXXXXXLALQSRLAS 816
                   ++LQS+LAS
Sbjct: 169 QTHSNTIVVSLQSKLAS 185


>BT019647-1|AAV38453.1|  301|Homo sapiens syntaxin 5A protein.
          Length = 301

 Score = 79.8 bits (188), Expect = 1e-14
 Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
 Frame = +1

Query: 433 MASRDRTSEFISTVRSLQGRF----LNKPTVRDDRKAAVLETYSQFMSMAKVISKNITST 600
           M+ RDRT EF+S  +SLQ R      NKP +R  R+       S+F  MAK I K++++T
Sbjct: 1   MSCRDRTQEFLSACKSLQTRQNGIQTNKPALRAVRQR------SEFTLMAKRIGKDLSNT 54

Query: 601 YTXXXXXXXXXXXXXXFDDRPTEIQELTYIIKGDLNSLNQQIARLGEMPRGXXXXX---- 768
           +               FDD+  EI+ELTYIIK D+NSLN+QIA+L +  R          
Sbjct: 55  FAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHL 114

Query: 769 -XXXXXXXLALQSRLAS 816
                   ++LQS+LAS
Sbjct: 115 QTHSNTIVVSLQSKLAS 131


>BT019646-1|AAV38452.1|  301|Homo sapiens syntaxin 5A protein.
          Length = 301

 Score = 79.8 bits (188), Expect = 1e-14
 Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
 Frame = +1

Query: 433 MASRDRTSEFISTVRSLQGRF----LNKPTVRDDRKAAVLETYSQFMSMAKVISKNITST 600
           M+ RDRT EF+S  +SLQ R      NKP +R  R+       S+F  MAK I K++++T
Sbjct: 1   MSCRDRTQEFLSACKSLQTRQNGIQTNKPALRAVRQR------SEFTLMAKRIGKDLSNT 54

Query: 601 YTXXXXXXXXXXXXXXFDDRPTEIQELTYIIKGDLNSLNQQIARLGEMPRGXXXXX---- 768
           +               FDD+  EI+ELTYIIK D+NSLN+QIA+L +  R          
Sbjct: 55  FAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHL 114

Query: 769 -XXXXXXXLALQSRLAS 816
                   ++LQS+LAS
Sbjct: 115 QTHSNTIVVSLQSKLAS 131


>BC012137-1|AAH12137.2|  355|Homo sapiens syntaxin 5 protein.
          Length = 355

 Score = 79.8 bits (188), Expect = 1e-14
 Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
 Frame = +1

Query: 433 MASRDRTSEFISTVRSLQGRF----LNKPTVRDDRKAAVLETYSQFMSMAKVISKNITST 600
           M+ RDRT EF+S  +SLQ R      NKP +R  R+       S+F  MAK I K++++T
Sbjct: 55  MSCRDRTQEFLSACKSLQTRQNGIQTNKPALRAVRQR------SEFTLMAKRIGKDLSNT 108

Query: 601 YTXXXXXXXXXXXXXXFDDRPTEIQELTYIIKGDLNSLNQQIARLGEMPRGXXXXX---- 768
           +               FDD+  EI+ELTYIIK D+NSLN+QIA+L +  R          
Sbjct: 109 FAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHL 168

Query: 769 -XXXXXXXLALQSRLAS 816
                   ++LQS+LAS
Sbjct: 169 QTHSNTIVVSLQSKLAS 185


>BC002645-1|AAH02645.1|  267|Homo sapiens STX5 protein protein.
          Length = 267

 Score = 79.8 bits (188), Expect = 1e-14
 Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
 Frame = +1

Query: 433 MASRDRTSEFISTVRSLQGRF----LNKPTVRDDRKAAVLETYSQFMSMAKVISKNITST 600
           M+ RDRT EF+S  +SLQ R      NKP +R  R+       S+F  MAK I K++++T
Sbjct: 1   MSCRDRTQEFLSACKSLQTRQNGIQTNKPALRAVRQR------SEFTLMAKRIGKDLSNT 54

Query: 601 YTXXXXXXXXXXXXXXFDDRPTEIQELTYIIKGDLNSLNQQIARLGEMPRGXXXXX---- 768
           +               FDD+  EI+ELTYIIK D+NSLN+QIA+L +  R          
Sbjct: 55  FAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHL 114

Query: 769 -XXXXXXXLALQSRLAS 816
                   ++LQS+LAS
Sbjct: 115 QTHSNTIVVSLQSKLAS 131


>AY005130-1|AAF89088.1|  666|Homo sapiens frizzled-3 protein.
          Length = 666

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 19/48 (39%), Positives = 28/48 (58%)
 Frame = +3

Query: 138 ILYTHECTMKVRNYLNAIGFLSED*RLQCDASSKAKYRRYRKTLGNRN 281
           I++   C M V + +  IGFL ED R+ C+AS  A+Y+    T G+ N
Sbjct: 238 IIFYAVCYMMV-SLIFFIGFLLED-RVACNASIPAQYKASTVTQGSHN 283


>AJ272427-1|CAB89114.1|  666|Homo sapiens frizzled homolog 3
           protein.
          Length = 666

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 19/48 (39%), Positives = 28/48 (58%)
 Frame = +3

Query: 138 ILYTHECTMKVRNYLNAIGFLSED*RLQCDASSKAKYRRYRKTLGNRN 281
           I++   C M V + +  IGFL ED R+ C+AS  A+Y+    T G+ N
Sbjct: 238 IIFYAVCYMMV-SLIFFIGFLLED-RVACNASIPAQYKASTVTQGSHN 283


>AB039723-1|BAA94968.1|  666|Homo sapiens WNT receptor frizzled-3
           protein.
          Length = 666

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 19/48 (39%), Positives = 28/48 (58%)
 Frame = +3

Query: 138 ILYTHECTMKVRNYLNAIGFLSED*RLQCDASSKAKYRRYRKTLGNRN 281
           I++   C M V + +  IGFL ED R+ C+AS  A+Y+    T G+ N
Sbjct: 238 IIFYAVCYMMV-SLIFFIGFLLED-RVACNASIPAQYKASTVTQGSHN 283


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,146,755
Number of Sequences: 237096
Number of extensions: 1920931
Number of successful extensions: 3494
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3483
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)