Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_I19
         (842 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069832-1|AAL39977.1|  467|Drosophila melanogaster SD07852p pro...   116   3e-26
AE014134-2696|AAN10935.1|  467|Drosophila melanogaster CG4214-PB...   116   3e-26
AE014134-2695|AAF53520.2|  467|Drosophila melanogaster CG4214-PA...   116   3e-26
X78219-1|CAA55064.1|  310|Drosophila melanogaster SED5 protein.       115   9e-26
AY069525-1|AAL39670.1| 1150|Drosophila melanogaster LD24034p pro...    36   0.092
AE014296-221|AAF47472.1| 1150|Drosophila melanogaster CG2469-PB,...    36   0.092
AE014296-220|AAN11469.1| 1150|Drosophila melanogaster CG2469-PA,...    36   0.092
AJ251580-1|CAB63903.1|  529|Drosophila melanogaster Sox100B prot...    29   8.0  
AE014297-4702|AAF57112.2|  529|Drosophila melanogaster CG15552-P...    29   8.0  

>AY069832-1|AAL39977.1|  467|Drosophila melanogaster SD07852p
           protein.
          Length = 467

 Score =  116 bits (280), Expect = 3e-26
 Identities = 66/136 (48%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
 Frame = +1

Query: 430 VMASRDRTSEFISTVRSLQGRFLNKPT-VRDDRKAAVLETYSQFMSMAKVISKNITSTYT 606
           VMA+RDRT EF + +RSLQ R + +   +RD RKA  +++YS+FM +A+ I KNI STY 
Sbjct: 157 VMAARDRTGEFANAIRSLQARNITRAVNIRDPRKAKQVQSYSEFMMVARFIGKNIASTYA 216

Query: 607 XXXXXXXXXXXXXXFDDRPTEIQELTYIIKGDLNSLNQQIARLGEMPR------GXXXXX 768
                         FDDRP EIQELTYIIKGDLN+LNQQIARL ++ +            
Sbjct: 217 KLEKLTMLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQDISKDQRRHTNGKHLV 276

Query: 769 XXXXXXXLALQSRLAS 816
                  LALQS+LAS
Sbjct: 277 SHSSNMVLALQSKLAS 292


>AE014134-2696|AAN10935.1|  467|Drosophila melanogaster CG4214-PB,
           isoform B protein.
          Length = 467

 Score =  116 bits (280), Expect = 3e-26
 Identities = 66/136 (48%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
 Frame = +1

Query: 430 VMASRDRTSEFISTVRSLQGRFLNKPT-VRDDRKAAVLETYSQFMSMAKVISKNITSTYT 606
           VMA+RDRT EF + +RSLQ R + +   +RD RKA  +++YS+FM +A+ I KNI STY 
Sbjct: 157 VMAARDRTGEFANAIRSLQARNITRAVNIRDPRKAKQVQSYSEFMMVARFIGKNIASTYA 216

Query: 607 XXXXXXXXXXXXXXFDDRPTEIQELTYIIKGDLNSLNQQIARLGEMPR------GXXXXX 768
                         FDDRP EIQELTYIIKGDLN+LNQQIARL ++ +            
Sbjct: 217 KLEKLTMLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQDISKDQRRHTNGKHLV 276

Query: 769 XXXXXXXLALQSRLAS 816
                  LALQS+LAS
Sbjct: 277 SHSSNMVLALQSKLAS 292


>AE014134-2695|AAF53520.2|  467|Drosophila melanogaster CG4214-PA,
           isoform A protein.
          Length = 467

 Score =  116 bits (280), Expect = 3e-26
 Identities = 66/136 (48%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
 Frame = +1

Query: 430 VMASRDRTSEFISTVRSLQGRFLNKPT-VRDDRKAAVLETYSQFMSMAKVISKNITSTYT 606
           VMA+RDRT EF + +RSLQ R + +   +RD RKA  +++YS+FM +A+ I KNI STY 
Sbjct: 157 VMAARDRTGEFANAIRSLQARNITRAVNIRDPRKAKQVQSYSEFMMVARFIGKNIASTYA 216

Query: 607 XXXXXXXXXXXXXXFDDRPTEIQELTYIIKGDLNSLNQQIARLGEMPR------GXXXXX 768
                         FDDRP EIQELTYIIKGDLN+LNQQIARL ++ +            
Sbjct: 217 KLEKLTMLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQDISKDQRRHTNGKHLV 276

Query: 769 XXXXXXXLALQSRLAS 816
                  LALQS+LAS
Sbjct: 277 SHSSNMVLALQSKLAS 292


>X78219-1|CAA55064.1|  310|Drosophila melanogaster SED5 protein.
          Length = 310

 Score =  115 bits (276), Expect = 9e-26
 Identities = 65/135 (48%), Positives = 82/135 (60%), Gaps = 7/135 (5%)
 Frame = +1

Query: 433 MASRDRTSEFISTVRSLQGRFLNKPT-VRDDRKAAVLETYSQFMSMAKVISKNITSTYTX 609
           MA+RDRT EF + +RSLQ R + +   +RD RKA  +++YS+FM +A+ I KNI STY  
Sbjct: 1   MAARDRTGEFANAIRSLQARNITRAVNIRDPRKAKQVQSYSEFMMVARFIGKNIASTYAK 60

Query: 610 XXXXXXXXXXXXXFDDRPTEIQELTYIIKGDLNSLNQQIARLGEMPR------GXXXXXX 771
                        FDDRP EIQELTYIIKGDLN+LNQQIARL ++ +             
Sbjct: 61  LEKLTMLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQDISKDQRRHTNGKHLVS 120

Query: 772 XXXXXXLALQSRLAS 816
                 LALQS+LAS
Sbjct: 121 HSSNMVLALQSKLAS 135


>AY069525-1|AAL39670.1| 1150|Drosophila melanogaster LD24034p
           protein.
          Length = 1150

 Score = 35.5 bits (78), Expect = 0.092
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +1

Query: 205 KTEDYNAMLPRRRNIGVTERLLETETDSYNKLDKKGVHYGESRPYENSSNSKSTLILKSS 384
           KTED+  +L   R+   T+   +++ D    LD    HY +    E S + K  L +K++
Sbjct: 55  KTEDFVTLLEESRSDDATKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKRELFMKAT 114

Query: 385 D 387
           +
Sbjct: 115 N 115


>AE014296-221|AAF47472.1| 1150|Drosophila melanogaster CG2469-PB,
           isoform B protein.
          Length = 1150

 Score = 35.5 bits (78), Expect = 0.092
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +1

Query: 205 KTEDYNAMLPRRRNIGVTERLLETETDSYNKLDKKGVHYGESRPYENSSNSKSTLILKSS 384
           KTED+  +L   R+   T+   +++ D    LD    HY +    E S + K  L +K++
Sbjct: 55  KTEDFVTLLEESRSDDATKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKRELFMKAT 114

Query: 385 D 387
           +
Sbjct: 115 N 115


>AE014296-220|AAN11469.1| 1150|Drosophila melanogaster CG2469-PA,
           isoform A protein.
          Length = 1150

 Score = 35.5 bits (78), Expect = 0.092
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +1

Query: 205 KTEDYNAMLPRRRNIGVTERLLETETDSYNKLDKKGVHYGESRPYENSSNSKSTLILKSS 384
           KTED+  +L   R+   T+   +++ D    LD    HY +    E S + K  L +K++
Sbjct: 55  KTEDFVTLLEESRSDDATKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKRELFMKAT 114

Query: 385 D 387
           +
Sbjct: 115 N 115


>AJ251580-1|CAB63903.1|  529|Drosophila melanogaster Sox100B protein
           protein.
          Length = 529

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 21/93 (22%), Positives = 34/93 (36%)
 Frame = +1

Query: 328 SRPYENSSNSKSTLILKSSDQDVFKFLEEFVFEPVMASRDRTSEFISTVRSLQGRFLNKP 507
           S P  +S++  S     SS Q V ++ E   + P  +S  +   F        G     P
Sbjct: 433 SPPLNSSASLSSACSSASSQQPVAEYYEHLGYSPAASSASQNPNFGPQQPYANGAASMTP 492

Query: 508 TVRDDRKAAVLETYSQFMSMAKVISKNITSTYT 606
           T+ D      L++  Q          ++  TYT
Sbjct: 493 TLGDPAPQQELQSQQQEQQHQNPSQHHLWGTYT 525


>AE014297-4702|AAF57112.2|  529|Drosophila melanogaster CG15552-PA
           protein.
          Length = 529

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 21/93 (22%), Positives = 34/93 (36%)
 Frame = +1

Query: 328 SRPYENSSNSKSTLILKSSDQDVFKFLEEFVFEPVMASRDRTSEFISTVRSLQGRFLNKP 507
           S P  +S++  S     SS Q V ++ E   + P  +S  +   F        G     P
Sbjct: 433 SPPLNSSASLSSACSSASSQQPVAEYYEHLGYSPAASSASQNPNFGPQQPYANGAASMTP 492

Query: 508 TVRDDRKAAVLETYSQFMSMAKVISKNITSTYT 606
           T+ D      L++  Q          ++  TYT
Sbjct: 493 TLGDPAPQQELQSQQQEQQHQNPSQHHLWGTYT 525


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,859,347
Number of Sequences: 53049
Number of extensions: 583543
Number of successful extensions: 954
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)