Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_I13
         (721 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035727-1|AAH35727.1|  337|Homo sapiens Lix1 homolog (mouse)-li...   282   1e-75
BC036467-1|AAH36467.1|  282|Homo sapiens Lix1 homolog (mouse) pr...   225   9e-59
AK098400-1|BAC05298.1|  282|Homo sapiens protein ( Homo sapiens ...   225   9e-59
U67615-1|AAB41309.1| 3801|Homo sapiens beige protein homolog pro...    30   9.6  
AL390765-1|CAI14952.1| 3801|Homo sapiens lysosomal trafficking r...    30   9.6  
AL121997-1|CAI18987.1| 3801|Homo sapiens lysosomal trafficking r...    30   9.6  

>BC035727-1|AAH35727.1|  337|Homo sapiens Lix1 homolog (mouse)-like
           protein.
          Length = 337

 Score =  282 bits (691), Expect = 1e-75
 Identities = 134/186 (72%), Positives = 151/186 (81%)
 Frame = +1

Query: 163 VNVVEALQEFWQVKXXXXXXXXXXXLVIYESVPAAHPPYVCYVTLPGGACFGSFQNCPTK 342
           VNVVEALQEFWQ+K           LV+YE VP+  PPYVCYVTLPGG+CFGSFQ CPTK
Sbjct: 98  VNVVEALQEFWQMKQSRGADLKNGALVVYEMVPSNSPPYVCYVTLPGGSCFGSFQFCPTK 157

Query: 343 AEARRSAAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAGDTSNPHQDPSAGIAAFR 522
           AEARRSAAKIALMNSVFNEH SRRI+D FIEK+V+EA ASF G+      +P+ GI AFR
Sbjct: 158 AEARRSAAKIALMNSVFNEHPSRRITDEFIEKSVSEALASFNGNREEA-DNPNTGIGAFR 216

Query: 523 FMLEANKGRTMLEFQELMTVFQLLHWNGSLXAMRERQCSRQEVVXHYSARALXDAMREQM 702
           FMLE+NKG++MLEFQELMTVFQLLHWNGSL AMRERQCSRQEV+ HYS RAL D +R QM
Sbjct: 217 FMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVLAHYSHRALDDDIRHQM 276

Query: 703 AREWAT 720
           A +W +
Sbjct: 277 ALDWVS 282


>BC036467-1|AAH36467.1|  282|Homo sapiens Lix1 homolog (mouse)
           protein.
          Length = 282

 Score =  225 bits (551), Expect = 9e-59
 Identities = 106/188 (56%), Positives = 137/188 (72%)
 Frame = +1

Query: 151 VLSTVNVVEALQEFWQVKXXXXXXXXXXXLVIYESVPAAHPPYVCYVTLPGGACFGSFQN 330
           V   +NVV  LQEFW+ K           +V+YES+PA  PP+V YVTLPGG+CFG+FQ 
Sbjct: 24  VFKDLNVVSMLQEFWESKQQQKAAFPSEGVVVYESLPAPGPPFVSYVTLPGGSCFGNFQC 83

Query: 331 CPTKAEARRSAAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAGDTSNPHQDPSAGI 510
           C ++AEARR AAK+AL+NS+FNE  SRRI+  FI ++V EA AS +G T +   DPS  +
Sbjct: 84  CLSRAEARRDAAKVALINSLFNELPSRRITKEFIMESVQEAVASTSG-TLDDADDPSTSV 142

Query: 511 AAFRFMLEANKGRTMLEFQELMTVFQLLHWNGSLXAMRERQCSRQEVVXHYSARALXDAM 690
            A+ +MLE+N G+TMLEFQELMT+FQLLHWNGSL A+RE +CSRQEV+ +YS  +L + M
Sbjct: 143 GAYHYMLESNMGKTMLEFQELMTIFQLLHWNGSLKALRETKCSRQEVISYYSQYSLDEKM 202

Query: 691 REQMAREW 714
           R  MA +W
Sbjct: 203 RSHMALDW 210


>AK098400-1|BAC05298.1|  282|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25534 fis, clone CBR08513. ).
          Length = 282

 Score =  225 bits (551), Expect = 9e-59
 Identities = 106/188 (56%), Positives = 137/188 (72%)
 Frame = +1

Query: 151 VLSTVNVVEALQEFWQVKXXXXXXXXXXXLVIYESVPAAHPPYVCYVTLPGGACFGSFQN 330
           V   +NVV  LQEFW+ K           +V+YES+PA  PP+V YVTLPGG+CFG+FQ 
Sbjct: 24  VFKDLNVVSMLQEFWESKQQQKAAFPSEGVVVYESLPAPGPPFVSYVTLPGGSCFGNFQC 83

Query: 331 CPTKAEARRSAAKIALMNSVFNEHESRRISDHFIEKAVAEARASFAGDTSNPHQDPSAGI 510
           C ++AEARR AAK+AL+NS+FNE  SRRI+  FI ++V EA AS +G T +   DPS  +
Sbjct: 84  CLSRAEARRDAAKVALINSLFNELPSRRITKEFIMESVQEAVASTSG-TLDDADDPSTSV 142

Query: 511 AAFRFMLEANKGRTMLEFQELMTVFQLLHWNGSLXAMRERQCSRQEVVXHYSARALXDAM 690
            A+ +MLE+N G+TMLEFQELMT+FQLLHWNGSL A+RE +CSRQEV+ +YS  +L + M
Sbjct: 143 GAYHYMLESNMGKTMLEFQELMTIFQLLHWNGSLKALRETKCSRQEVISYYSQYSLDEKM 202

Query: 691 REQMAREW 714
           R  MA +W
Sbjct: 203 RSHMALDW 210


>U67615-1|AAB41309.1| 3801|Homo sapiens beige protein homolog protein.
          Length = 3801

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 247  YESVPAAHPPYVCYVTLPGGACFGSFQNCPTKA 345
            Y   P+A  P VC+ + P G  FGS Q  PT+A
Sbjct: 3472 YVGSPSAPVPVVCF-SQPHGERFGSLQALPTRA 3503


>AL390765-1|CAI14952.1| 3801|Homo sapiens lysosomal trafficking
            regulator protein.
          Length = 3801

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 247  YESVPAAHPPYVCYVTLPGGACFGSFQNCPTKA 345
            Y   P+A  P VC+ + P G  FGS Q  PT+A
Sbjct: 3472 YVGSPSAPVPVVCF-SQPHGERFGSLQALPTRA 3503


>AL121997-1|CAI18987.1| 3801|Homo sapiens lysosomal trafficking
            regulator protein.
          Length = 3801

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 247  YESVPAAHPPYVCYVTLPGGACFGSFQNCPTKA 345
            Y   P+A  P VC+ + P G  FGS Q  PT+A
Sbjct: 3472 YVGSPSAPVPVVCF-SQPHGERFGSLQALPTRA 3503


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,967,375
Number of Sequences: 237096
Number of extensions: 1544582
Number of successful extensions: 4222
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4219
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)