Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_I08
(585 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 186 3e-46
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 169 4e-41
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 168 7e-41
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 167 2e-40
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 159 3e-38
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 153 3e-36
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 107 1e-22
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 107 3e-22
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 104 1e-21
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 101 1e-20
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 101 1e-20
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 94 3e-18
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 93 4e-18
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 91 1e-17
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 89 5e-17
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 72 1e-11
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 60 6e-09
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 52 1e-05
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 42 0.008
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 40 0.057
UniRef50_Q50304 Cluster: 30S ribosomal protein S8; n=7; Mollicut... 38 0.13
UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15; Bacteri... 38 0.23
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 37 0.30
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j... 37 0.40
UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26; Epsilon... 37 0.40
UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1... 36 0.53
UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021; ... 36 0.70
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n... 34 2.2
UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole gen... 34 2.8
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_Q2YIA3 Cluster: Ribosomal protein S8; n=20; Halimeda|Re... 33 3.8
UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2; ... 33 5.0
UniRef50_A0G972 Cluster: Putative uncharacterized protein precur... 33 6.6
UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular... 33 6.6
UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellula... 33 6.6
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 186 bits (454), Expect = 3e-46
Identities = 85/98 (86%), Positives = 92/98 (93%), Gaps = 1/98 (1%)
Frame = +2
Query: 167 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 343
VIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W N
Sbjct: 33 VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNN 92
Query: 344 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
LLPSRQFG++VLTTS GIMDHEEARRKH GGKILGFFF
Sbjct: 93 LLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 57.2 bits (132), Expect = 3e-07
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +1
Query: 70 MVRMNVLSDALKSIHNAEKRGKRQVLIRP 156
MVRMNVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRP 29
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 169 bits (411), Expect = 4e-41
Identities = 77/98 (78%), Positives = 87/98 (88%), Gaps = 1/98 (1%)
Frame = +2
Query: 167 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWT-N 343
VI+KFL VM KHGYIGEFE VDDHR+GKIVV L GRLNKCGVISPRFDV + +IE WT
Sbjct: 33 VIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTAR 92
Query: 344 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
LLPSRQFG++VLTTS GIMDHEEARRK++GGK+LGFF+
Sbjct: 93 LLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
Score = 50.4 bits (115), Expect = 3e-05
Identities = 22/29 (75%), Positives = 28/29 (96%)
Frame = +1
Query: 70 MVRMNVLSDALKSIHNAEKRGKRQVLIRP 156
MVR++VL+D LKS++NAEKRGKRQV+IRP
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRP 29
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 168 bits (409), Expect = 7e-41
Identities = 78/98 (79%), Positives = 86/98 (87%), Gaps = 1/98 (1%)
Frame = +2
Query: 167 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 343
VIV FLTVMMKHGY GEFEI+DDHR GKIVVNLTGRLNKCGVIS RFDV + D+++W N
Sbjct: 156 VIVWFLTVMMKHGYTGEFEIIDDHRDGKIVVNLTGRLNKCGVISLRFDVQLKDLDKWQNN 215
Query: 344 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
LLP RQFG++VLTT GI+DHEEARRKH GGKILGFFF
Sbjct: 216 LLPLRQFGFIVLTTLAGIIDHEEARRKHTGGKILGFFF 253
Score = 57.2 bits (132), Expect = 3e-07
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +1
Query: 70 MVRMNVLSDALKSIHNAEKRGKRQVLIRP 156
MVRMNVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRP 152
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 167 bits (406), Expect = 2e-40
Identities = 75/96 (78%), Positives = 86/96 (89%), Gaps = 1/96 (1%)
Frame = +2
Query: 170 IVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNL 346
IV+FLTVMMKHGYI EFEI+DDHRAGK+VVNLTGRLNKCGVISPRFDV + D+E+W NL
Sbjct: 132 IVRFLTVMMKHGYISEFEIIDDHRAGKMVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNL 191
Query: 347 LPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFF 454
LP+RQFG++VLTT GIMD EE R+KH GG+ILGFF
Sbjct: 192 LPARQFGFIVLTTLAGIMDREEGRQKHTGGEILGFF 227
Score = 39.9 bits (89), Expect = 0.043
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1
Query: 64 LAMVRMNVLSDALKSIHNAEKRGKRQVLIR 153
+ MV MNVL DALKS ++AEK GKRQ IR
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIR 126
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 159 bits (387), Expect = 3e-38
Identities = 75/98 (76%), Positives = 84/98 (85%), Gaps = 1/98 (1%)
Frame = +2
Query: 167 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 343
VI++FLTVM KHGYIGEFEI DDHRAGK+VV LT RLNKCGVISPRF V + D+E+W N
Sbjct: 33 VIIRFLTVM-KHGYIGEFEITDDHRAGKMVVYLTDRLNKCGVISPRFHVQLKDLEKWQNN 91
Query: 344 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
LLPS QFG+++LTTS GI D EEARRKH GGKILGFFF
Sbjct: 92 LLPSYQFGFIILTTSAGITDREEARRKHTGGKILGFFF 129
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +1
Query: 70 MVRMNVLSDALKSIHNAEKRGKRQVLIRP 156
MVR NVL+DALK I+NA+KRGKRQVL+RP
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRP 29
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 153 bits (371), Expect = 3e-36
Identities = 70/92 (76%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
Frame = +2
Query: 167 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 343
VIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTGRLNKCGVI+ RFDV D+E+W N
Sbjct: 199 VIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTGRLNKCGVINTRFDVQPKDLEKWRNN 258
Query: 344 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 439
L PS QFG++VLTTS GIMDHEEAR+KH G +
Sbjct: 259 LFPSCQFGFIVLTTSAGIMDHEEARQKHTGSR 290
Score = 42.3 bits (95), Expect = 0.008
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1
Query: 91 SDALKSIHNAEKRGKRQVLIR 153
SDALKSI+NAEKRGKRQVLIR
Sbjct: 174 SDALKSINNAEKRGKRQVLIR 194
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 107 bits (258), Expect = 1e-22
Identities = 47/98 (47%), Positives = 72/98 (73%), Gaps = 1/98 (1%)
Frame = +2
Query: 167 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWT-N 343
V+ FL +M + GYI F++ D HR G+I V+L GR+N C ++ R DV +IE++T
Sbjct: 32 VMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDLQGRVNDCKALTYRQDVRAKEIEKYTER 91
Query: 344 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
LP+RQ+GY+V+TT GI+DHEEA ++++GG++LGFF+
Sbjct: 92 TLPTRQWGYVVITTPDGILDHEEAIKRNVGGQVLGFFY 129
Score = 32.3 bits (70), Expect = 8.7
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +1
Query: 85 VLSDALKSIHNAEKRGKRQVLIRP 156
+L+DAL++I NAE+RGK V ++P
Sbjct: 5 ILNDALRTIVNAERRGKASVELKP 28
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 107 bits (256), Expect = 3e-22
Identities = 47/94 (50%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Frame = +2
Query: 179 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPS 355
FL M++HGYI F + D R+GK +++L GRLN+CG ISP + V + IE + T LLP+
Sbjct: 35 FLLQMLRHGYISGFSYIHDKRSGKSIIDLNGRLNRCGAISPNYIVKRDGIEDFRTRLLPA 94
Query: 356 RQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
RQFG+++ TS GI+DH+E +++GGKILG+F+
Sbjct: 95 RQFGHVLFNTSKGILDHKECLTENVGGKILGYFY 128
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 104 bits (250), Expect = 1e-21
Identities = 46/98 (46%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Frame = +2
Query: 167 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 343
+I + L VM K+GYIGEFE +DD RAG V L GR+NK G I PRF V +++ E+W
Sbjct: 33 LIGEVLRVMQKYGYIGEFEFIDDGRAGVYRVQLLGRINKAGAIKPRFPVKVSEFEKWEKR 92
Query: 344 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
LP+ +FG L+++TS G+M H+EA K +GG+++ + +
Sbjct: 93 FLPAFEFGILIVSTSQGVMSHKEAIEKGIGGRLIAYVY 130
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 101 bits (242), Expect = 1e-20
Identities = 46/101 (45%), Positives = 67/101 (66%), Gaps = 4/101 (3%)
Frame = +2
Query: 167 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTN- 343
+I+ L VM K GYIGEFE +DD RAGKI+V L GR+NKCG ISPR+ + N + R +
Sbjct: 33 LIISVLRVMQKEGYIGEFEYIDDGRAGKIIVQLLGRINKCGPISPRYPLDYNGLLRLPDY 92
Query: 344 ---LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
LPS++ G ++++T G+M H + R+ +GG LG+ +
Sbjct: 93 IRKYLPSKEIGIIIISTPKGVMSHRDGIREKIGGVTLGYVY 133
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 101 bits (242), Expect = 1e-20
Identities = 46/93 (49%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +2
Query: 182 LTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSR 358
L VM GYIG+FE +DD +AG V L GR+NKCG I PR+ V ERW LP++
Sbjct: 38 LKVMQDLGYIGDFEFIDDGKAGIYSVTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAK 97
Query: 359 QFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
FG L+LTTS G+M EAR K +GG++L + +
Sbjct: 98 NFGALILTTSSGVMSQYEARDKKIGGQLLAYVY 130
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 93.9 bits (223), Expect = 3e-18
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = +2
Query: 167 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 343
+I L V+ GY+ FE VDD +AGK V L G +N+CG + PR+ ++ E+W
Sbjct: 50 IIGSVLEVLYDRGYVDGFEYVDDGKAGKFEVELKGAINECGAVKPRYSAGADEFEKWEKR 109
Query: 344 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
LP+R +G L++TTS G+M H EAR + +GG+++ + +
Sbjct: 110 YLPARDYGTLIVTTSHGVMSHYEAREEGIGGQVIAYVY 147
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 93.1 bits (221), Expect = 4e-18
Identities = 42/98 (42%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Frame = +2
Query: 167 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 343
+I + L VM + YI FE++++ R GK V L+ +N CGVI PR V ++IER+ +
Sbjct: 32 MIGRILKVMQDYNYIKSFEVIEEERGGKFRVELSDTINNCGVIKPRLSVKNSNIERYESR 91
Query: 344 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
LP++ FG ++LTT+ GIM H EAR+ +GGK+L + +
Sbjct: 92 YLPAQDFGIIILTTTKGIMSHIEARKLGIGGKLLAYVY 129
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 91.5 bits (217), Expect = 1e-17
Identities = 40/98 (40%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Frame = +2
Query: 167 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 343
+I L VM +GYI FE V++HR GK +V L+G +N CG I PRF + + E +
Sbjct: 32 LIGNVLKVMKDYGYIKGFEYVENHRGGKFIVELSGNINDCGAIRPRFSSSVTEYEMYEKR 91
Query: 344 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
LP+R FG L+++T+ G+M ++AR++ LGG +L + +
Sbjct: 92 YLPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 89.4 bits (212), Expect = 5e-17
Identities = 43/96 (44%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = +2
Query: 173 VKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLL 349
V+ L + K GYIGEFE V+D R GK V+L ++ KCG ISPRF V + W L
Sbjct: 35 VEVLGTLKKAGYIGEFEHVEDSRGGKFSVHLLAKITKCGAISPRFKVKKGEYTFWEQQYL 94
Query: 350 PSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
PS G LV+TT+ G+M H EA + +GG ++G+ +
Sbjct: 95 PSYDRGMLVVTTNQGVMSHHEAAERGIGGFLIGYVY 130
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 71.7 bits (168), Expect = 1e-11
Identities = 31/98 (31%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Frame = +2
Query: 167 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 343
+I+K + +M + GYI + +VD R I + L+ N+ I PRF V +++E++
Sbjct: 32 LIIKLVEIMKREGYIKNYRLVDSSRGKIIEIELSEYFNEANAIKPRFPVEYSELEKYEKR 91
Query: 344 LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
LP+ FG L+L+TS G++ + EA+ + +GG ++ + +
Sbjct: 92 YLPALNFGRLILSTSKGLITNREAKEQKIGGVLIAYVY 129
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 60.1 bits (139), Expect(2) = 6e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +2
Query: 203 GYIGEFEIVDDHRAGKIVVNLTGRLNKCGVI 295
GYI EFE +DDHRAGKIVV L GR+NKCGVI
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINKCGVI 137
Score = 35.5 bits (78), Expect = 0.93
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +1
Query: 64 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRP 156
++ V + + +S++NAEKRGKRQVL+RP
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRP 61
Score = 22.6 bits (46), Expect(2) = 6e-09
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 167 VIVKFLTVMMKH 202
V++KFL VM KH
Sbjct: 65 VVIKFLQVMQKH 76
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +2
Query: 179 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIER 334
F+TV MK G+FEIVD+ G+I V+L G LNK GVI FDV + D+E+
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNKYGVIGLGFDVQLGDLEK 51
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa|Rep:
Os01g0153200 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1139
Score = 42.3 bits (95), Expect = 0.008
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +2
Query: 227 VDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDI 328
VDDH++G+I++ GRLNK GVIS R DV + +
Sbjct: 912 VDDHKSGEIILEFDGRLNKWGVISFRSDVKVKKL 945
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 39.5 bits (88), Expect = 0.057
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +2
Query: 209 IGEFEIVDDHRAGKIVVNLTGRLNK 283
IG+FE++DDHRAGKIV NL+ ++ +
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQ 33
>UniRef50_Q50304 Cluster: 30S ribosomal protein S8; n=7;
Mollicutes|Rep: 30S ribosomal protein S8 - Mycoplasma
pneumoniae
Length = 142
Score = 38.3 bits (85), Expect = 0.13
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Frame = +2
Query: 173 VKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVIS----PRFDVPINDIERWT 340
+ L +++K GY+ F+++++ K +V + + + S + P I R
Sbjct: 42 IAILEILVKEGYLANFQVLENKSKTKRIVTFNLKYTQRRIPSINGVKQISKPGLRIYRPF 101
Query: 341 NLLPS--RQFGYLVLTTSGGIMDHEEARRKHLGGKILGF 451
LP G +++TS G+M + AR K +GG+IL +
Sbjct: 102 EKLPLVLNGLGIAIISTSDGVMTDKVARLKKIGGEILAY 140
>UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15;
Bacteria|Rep: 30S ribosomal protein S8 - Bacteroides
thetaiotaomicron
Length = 131
Score = 37.5 bits (83), Expect = 0.23
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Frame = +2
Query: 188 VMMKHGYIGEFEIVDDHRAGKIVVNLT-GRLNKCGVISPRFDVPINDIERWTNL--LPS- 355
++ + GYI ++ V+D G I V L +NK I V + ++T +P
Sbjct: 37 ILFEKGYILNYKFVEDGPQGTIKVALKYDSVNKVNAIKKLERVSSPGMRKYTGYKDMPRV 96
Query: 356 -RQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
G +++TS G+M ++EA +GG++L + +
Sbjct: 97 INGLGIAIISTSKGVMTNKEAAELKIGGEVLCYVY 131
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 37.1 bits (82), Expect = 0.30
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Frame = +2
Query: 188 VMMKHGYIGEFEIVDDHRAGKIVVNLT-GRLNKCGV-ISPRFDVPINDIERWTNLLP--S 355
++++ GYI F +DD + G + V L ++ + + R P ++ LP
Sbjct: 40 ILLEKGYIKNFVNIDDEKQGLLRVYLKYDEYDQPAIRMLERVSRPGRREYADSDNLPEVK 99
Query: 356 RQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
G ++L+TS G+M +EARR +GG++L F
Sbjct: 100 NGLGIVILSTSRGVMSDKEARRFGVGGEVLAKVF 133
>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
japonica|Rep: Ribosome protein S8 - Griffithsia japonica
(Red alga)
Length = 142
Score = 36.7 bits (81), Expect = 0.40
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 302 RFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
R VP + + R LP + G +L+T G+M EAR+K LGG+++G F
Sbjct: 89 RVSVPSHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142
>UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26;
Epsilonproteobacteria|Rep: 30S ribosomal protein S8 -
Wolinella succinogenes
Length = 131
Score = 36.7 bits (81), Expect = 0.40
Identities = 27/99 (27%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Frame = +2
Query: 167 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCG--VISP--RFDVPINDIER 334
++V L V + G+I ++++D + GK +N+ + ++ G VIS R + +
Sbjct: 31 IVVSILEVFLAKGFIESYKVID--KDGKQSINVVLKYDEKGRSVISEIKRISKSGRRVYK 88
Query: 335 WTNLLPSRQFGY--LVLTTSGGIMDHEEARRKHLGGKIL 445
+ L + GY +V++TS G++ +EEA + ++GG+ L
Sbjct: 89 GRDELKRFKNGYGTIVVSTSKGVIGNEEAYKANVGGEAL 127
>UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1;
Acanthamoeba castellanii|Rep: Mitochondrial ribosomal
protein S8 - Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 36.3 bits (80), Expect = 0.53
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +2
Query: 173 VKFLTVMMKHGYIGEFEIVDDHRAGKIV--VNLTGRLNKCGVISPRFDVPINDIERWTNL 346
+ L+V+ K GYI F I D ++ +N + VIS ++
Sbjct: 31 INVLSVLYKLGYIRGFIIKDQKNITILLKYINNKPAVRNIAVISTPGRRTYLKHKKLEKF 90
Query: 347 LPSRQFGYLVLTTSGGIMDHEEARRKHLGGKIL 445
L + G+L+L+TS GI+ EE+ +GG+ L
Sbjct: 91 LTKKDSGFLILSTSKGILTDEESNMFKIGGEAL 123
>UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 90.t00021 - Entamoeba histolytica HM-1:IMSS
Length = 627
Score = 35.9 bits (79), Expect = 0.70
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 236 HRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 388
H G I ++L RLN+ GV+ + + +I + LL FGYL +T+S
Sbjct: 192 HEIGNIHISLLNRLNQIGVVIGIYSNMLEEIPEYVTLL--HHFGYLTITSS 240
>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
protein S8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 34.3 bits (75), Expect = 2.2
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 365 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
G ++L+TS GIM EAR K +GG+IL + +
Sbjct: 104 GIVILSTSQGIMTDREARLKRIGGEILCYIW 134
>UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 93
Score = 33.9 bits (74), Expect = 2.8
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 365 GYLVLTTSGGIMDHEEARRKHLGGKIL 445
G ++L+TS GIM EAR K +GG+IL
Sbjct: 2 GIVILSTSRGIMTDREARLKRIGGEIL 28
>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
Pectobacterium atrosepticum|Rep: Putative
uncharacterized protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 860
Score = 33.5 bits (73), Expect = 3.8
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -3
Query: 181 KLNDDFGXRA**GLVFSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRID 29
+ N ++ A G + SLA Y H SY W RFSS FV+N ID
Sbjct: 335 RFNMEWEHNASWGKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVID 385
>UniRef50_Q2YIA3 Cluster: Ribosomal protein S8; n=20; Halimeda|Rep:
Ribosomal protein S8 - Halimeda opuntia
Length = 133
Score = 33.5 bits (73), Expect = 3.8
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Frame = +2
Query: 182 LTVMMKHGYIGEFEIVDDHR-----AGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNL 346
L +++ HG+I F +++ K V+ RL++ G R V ++ + +
Sbjct: 38 LNILVHHGFIKNFSQINNREFLVTLKSKSVLRKLKRLSRPGC---RLYVSAQNLPQ---I 91
Query: 347 LPSRQFGY-----LVLTTSGGIMDHEEARRKHLGGKILGF 451
L S Q G + L+TS GI+ EAR +GG+ILG+
Sbjct: 92 LRSGQLGLAPRAIIFLSTSKGILSDREARHLKVGGEILGY 131
>UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 186
Score = 33.1 bits (72), Expect = 5.0
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +2
Query: 266 TGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKIL 445
T ++ C +++P D IN + + +L +GY+V+TT G++DHEE G +L
Sbjct: 134 TWQIYFCNMLAPSLD--INLMLYYLSL--HSVWGYVVITTPNGVLDHEE-------GPLL 182
Query: 446 GFF 454
G+F
Sbjct: 183 GYF 185
>UniRef50_A0G972 Cluster: Putative uncharacterized protein
precursor; n=1; Burkholderia phymatum STM815|Rep:
Putative uncharacterized protein precursor -
Burkholderia phymatum STM815
Length = 287
Score = 32.7 bits (71), Expect = 6.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 124 KRGKRQVLIRPXFQSHR*VFNSDDEARLHRRV 219
+RG+R V++ P F R V + D RLHRR+
Sbjct: 83 RRGRRAVILHPRFPRLRTVGGTPDRLRLHRRI 114
>UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechocystis
sp. (strain PCC 6803)
Length = 133
Score = 32.7 bits (71), Expect = 6.6
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 365 GYLVLTTSGGIMDHEEARRKHLGGKILGFFF 457
G +++TS GIM EARR+ +GG+IL + +
Sbjct: 103 GIAIVSTSHGIMTDREARRQGIGGEILCYIW 133
>UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellular
organisms|Rep: 30S ribosomal protein S8 - Bacillus
anthracis
Length = 132
Score = 32.7 bits (71), Expect = 6.6
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Frame = +2
Query: 188 VMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVIS--PRFDVPINDIERWTNLLPS-- 355
++ + G+I + E ++D++ G + + L N VI+ R P + + +P
Sbjct: 39 LLKREGFIRDVEYIEDNKQGILRIFLKYGANNERVITGLKRISKPGLRVYAKADEVPRVL 98
Query: 356 RQFGYLVLTTSGGIMDHEEARRKHLGGKILGF 451
G +++TS G+M ++AR+ GG+++ +
Sbjct: 99 NGLGIALVSTSKGVMTDKDARQLQTGGEVVAY 130
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,280,840
Number of Sequences: 1657284
Number of extensions: 7864585
Number of successful extensions: 16230
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 15935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16211
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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