Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_H11
         (915 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.3  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   3.3  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   7.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   7.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 84  LHFLPCLFYNYFSAVVY 34
           L FLPC++Y Y + +++
Sbjct: 206 LLFLPCIYYFYSAFIIF 222


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +1

Query: 802  TVTKIPFNLRNKKCFINLSNIPNNLKSCYSFXVYVNT 912
            T  KI  NLRN+       N+ +NLK  Y F V   T
Sbjct: 1252 TSQKIVPNLRNQNLSHQAKNLDSNLK--YEFWVTAAT 1286


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -1

Query: 795 QYCEFYQVFFKISSLMNNIFVRVDGDRCMK 706
           Q CEF ++ F +  L+  +   +D   C K
Sbjct: 462 QLCEFSRLNFSVEHLLMELSRAIDSVACSK 491


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 230 NRILGVAFYWGFGALERVPAVLILF 156
           N +  + FYW FG L      L LF
Sbjct: 315 NNLERIYFYWSFGFLIVRTVCLCLF 339


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 775 LVEFAVLFETVTKIPFNLRNKKCFINLSNIP-NNLKSCYSFXVY 903
           L+ F  +FE+ T++    R     I  S+IP +N++   +   Y
Sbjct: 399 LLRFLSVFESCTRLNNESRKPSFVIQFSHIPVDNIEFAGALVTY 442


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 230 NRILGVAFYWGFGALERVPAVLILF 156
           N +  + FYW FG L      L LF
Sbjct: 315 NNLERIYFYWSFGFLIVRTVCLCLF 339


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,669
Number of Sequences: 336
Number of extensions: 4585
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25547951
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)