Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_H08
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.87 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   3.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.5  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   4.6  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.6  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.6  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   8.1  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +1

Query: 622 HREGLPWHLPSARCLHPKGESVEEAPFRDLEVDG 723
           HRE + W + + R ++ +GES   + +R L  +G
Sbjct: 290 HREDVRWVMIALRQMYDRGESKGSSCYRLLSRNG 323


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = -3

Query: 683 LSPFGCKHRAEGRCHGRPSRCP 618
           L P+    R   RCHG    CP
Sbjct: 336 LWPYTMYFRMPHRCHGNLQSCP 357


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 369 GWLKNGRLSS 398
           GWLK G+LSS
Sbjct: 124 GWLKKGKLSS 133


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 479 SRSPYW*NQCRRHVERIHRLSSHQC 405
           +  P+  ++CR    R H L  H+C
Sbjct: 243 NEKPFECDKCRGRFRRRHHLVHHKC 267


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -3

Query: 251 LVDQPG-KLRKLFPSILPKQFSXPWVRLTSVV 159
           LV +P  +LRK F  +L K     W+ L + V
Sbjct: 136 LVTRPSYRLRKFFDELLFKCMKEKWIPLCNSV 167


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -3

Query: 251 LVDQPG-KLRKLFPSILPKQFSXPWVRLTSVV 159
           LV +P  +LRK F  +L K     W+ L + V
Sbjct: 369 LVTRPSYRLRKFFDELLFKCMKEKWIPLCNSV 400


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -3

Query: 251 LVDQPG-KLRKLFPSILPKQFSXPWVRLTSVV 159
           LV +P  +LRK F  +L K     W+ L + V
Sbjct: 369 LVTRPSYRLRKFFDELLFKCMKEKWIPLCNSV 400


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 665 CIRKVKVLKRPRFEISKLME 724
           C+R     KRP+FE S   E
Sbjct: 192 CLRTCSSAKRPKFENSSCDE 211


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,560
Number of Sequences: 336
Number of extensions: 3853
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)