Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_H04
(889 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 32 0.54
SB_31911| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.94
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 30 2.2
SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044) 30 2.9
SB_50648| Best HMM Match : Atrophin-1 (HMM E-Value=1.3) 30 2.9
SB_56406| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_55202| Best HMM Match : FIVAR (HMM E-Value=3.7) 29 3.8
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 29 3.8
SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73) 29 3.8
SB_51020| Best HMM Match : BDV_P10 (HMM E-Value=1.9) 29 3.8
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_24887| Best HMM Match : PspA_IM30 (HMM E-Value=0.19) 29 3.8
SB_4040| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.00044) 29 5.0
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_14707| Best HMM Match : A_deamin (HMM E-Value=0) 29 6.6
SB_50449| Best HMM Match : Drf_DAD (HMM E-Value=0.00043) 29 6.6
SB_56482| Best HMM Match : HEAT (HMM E-Value=1.9e-16) 28 8.8
SB_21913| Best HMM Match : C2 (HMM E-Value=0.31) 28 8.8
SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05) 28 8.8
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 32.3 bits (70), Expect = 0.54
Identities = 13/59 (22%), Positives = 31/59 (52%)
Frame = +2
Query: 560 KFDTEIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEKLTKA 736
+F+T +KEL S + +E++ + +DD R ++++ +K + D++ + A
Sbjct: 53 EFETTMKELEQSYLREKEEIIKRLGSELDDNVQEKERMIEELEAKLQEKELDVQSVRDA 111
>SB_31911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1312
Score = 31.5 bits (68), Expect = 0.94
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Frame = +2
Query: 419 SSKTLLKQEAVVTVQGVPLSSYMEDLLTNKISLNAGKGRQAIEWVIGKFDTEIKELASSA 598
+ + LLKQ+ + + L S + DL K R A + VI + + L
Sbjct: 883 AQERLLKQKEQYEQKTLQLQSALNDLNVKKEEAEQSS-RSAAD-VISELQAHKQVLEQEI 940
Query: 599 CKSTDELLSQT---KKSIDDITTSARRSMDDISSKAKSTLDDIEKLTKANANQRS*KEE 766
+ +L + K+++++ + R M ++ + K +D+EKL +A ++ +EE
Sbjct: 941 LSNRKKLQMEAVAAKQALEETKLNQIRIMSELEKEKKKMQEDVEKLKEAKKHREKMREE 999
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/66 (22%), Positives = 33/66 (50%)
Frame = +2
Query: 536 QAIEWVIGKFDTEIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDD 715
+A+E + GK E+ +L + DE++ + +K D+ R++ +K + LD+
Sbjct: 182 KAVESLTGKHHEELDQLMKAHRVRYDEVVKEKQKVEKDLNEKLARALAQAEAKTDNALDE 241
Query: 716 IEKLTK 733
++ K
Sbjct: 242 KMRIEK 247
>SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044)
Length = 933
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/61 (22%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 572 EIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLD--DIEKLTKANAN 745
E+K+ + S LS +K++D++ + + + D+S++ +T+D ++EK +
Sbjct: 328 EVKKQTDDSQNSHASQLSALEKTVDEMKKALNQQLKDVSNRPAATVDMAEVEKFVGKKID 387
Query: 746 Q 748
Q
Sbjct: 388 Q 388
>SB_50648| Best HMM Match : Atrophin-1 (HMM E-Value=1.3)
Length = 1281
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 602 KSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEKLTK-ANANQRS*KEE*YAC 778
K++D+ K++ DD++ +R+ DD+S K DD+ K A+ + S +
Sbjct: 599 KASDDPSLPNKRASDDLSLPNKRASDDLSLPNKRASDDLSLPNKRASDDHPSLQNNADPA 658
Query: 779 LCNTYIENG 805
C++ I+ G
Sbjct: 659 RCDSQIQRG 667
>SB_56406| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 481
Score = 29.5 bits (63), Expect = 3.8
Identities = 26/78 (33%), Positives = 39/78 (50%)
Frame = +2
Query: 512 SLNAGKGRQAIEWVIGKFDTEIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISS 691
S N GKGR+ I V + DTE E S DE +++ K I +++ M D+
Sbjct: 244 SRNKGKGRRQIRQVERESDTESSETES------DEDINRILKHHSTILDESKQ-MKDLDK 296
Query: 692 KAKSTLDDIEKLTKANAN 745
+ K+T +E T A+AN
Sbjct: 297 RVKTT---VEPDTGADAN 311
>SB_55202| Best HMM Match : FIVAR (HMM E-Value=3.7)
Length = 145
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +2
Query: 560 KFDTEIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEKLTKA 736
+F E K L + K+T ++++ K I T + DD KA+ L DIE+ + A
Sbjct: 17 EFVAEQKSLNENLQKAT-KMINAIDKQIKQKTKEIKEIFDDAKKKAEQKLRDIEEASSA 74
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 29.5 bits (63), Expect = 3.8
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 4/127 (3%)
Frame = +2
Query: 377 AVDETVRYTPHPSDSSKTLLKQEAVVTVQGVPLSSYMEDLLTNKISLNAG----KGRQAI 544
A +T + TP S + + + + + P +S + K+S AG K
Sbjct: 1518 ASTDTAKVTPKASTDAPKVTPKASTDAAKVTPKASINTAKVALKVSTEAGKVTPKASTDA 1577
Query: 545 EWVIGKFDTEIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEK 724
V K TE ++ A STD K S D + + S D K++ D ++
Sbjct: 1578 AKVTPKASTEAAKVTPKA--STDSTKVTPKASTDAAKVTPKASTDAAKVTPKASTDAVKV 1635
Query: 725 LTKANAN 745
+KA+ +
Sbjct: 1636 TSKASTD 1642
>SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73)
Length = 895
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/72 (19%), Positives = 36/72 (50%)
Frame = +2
Query: 440 QEAVVTVQGVPLSSYMEDLLTNKISLNAGKGRQAIEWVIGKFDTEIKELASSACKSTDEL 619
Q A++ + G+P+ ++D++ + ++ ++ I FDT ++ + S++ S
Sbjct: 513 QSALLLLHGIPVVYNLDDIIEDNEKKRKETEKKKLKESIESFDTSVESIGSNSTGSPGRD 572
Query: 620 LSQTKKSIDDIT 655
S ++ I I+
Sbjct: 573 KSDKQRKITQIS 584
>SB_51020| Best HMM Match : BDV_P10 (HMM E-Value=1.9)
Length = 576
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 590 SSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEKLTKANANQRS 754
+S C + D QT + T S+RRS+ S K ST+ + +K N N+RS
Sbjct: 421 TSFCPAPDRP-GQTAEDKAKATKSSRRSVHSTSGKRPSTVAESKKPLLKNKNRRS 474
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +2
Query: 581 ELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEK 724
E S ++ DE+ +++D+I + R++D+I LD+I++
Sbjct: 1514 EADRSQSRALDEIDRNQSRALDEIDRNQSRALDEIDRNQSRALDEIDR 1561
>SB_24887| Best HMM Match : PspA_IM30 (HMM E-Value=0.19)
Length = 320
Score = 29.5 bits (63), Expect = 3.8
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Frame = +2
Query: 473 LSSYMEDL--LTNKISLNAGKGRQAIEWVIGKFDTEIKELASSACKSTDELLSQTKK--- 637
L S +EDL NK+ + + I + G+ D E++ LA+ + + L + KK
Sbjct: 154 LESRLEDLESANNKLHHSLKFKEEKISDLEGQID-ELESLAAEKNRLSQSLEQKMKKIME 212
Query: 638 ---SIDDITTSARRSMDDISSKAK--STLDD-IEKLTKANANQRS*KEE 766
++D+T +R + + KAK TL+D I +L + A+ + +E+
Sbjct: 213 LENRVEDLTCETQRLQNSVDQKAKRIQTLEDRISELEQLLASSQELRED 261
>SB_4040| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.00044)
Length = 817
Score = 29.1 bits (62), Expect = 5.0
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Frame = +2
Query: 452 VTVQGVPLSSYME--DLLTNKISLNAGKGRQ-AIEWVIGKFD--TEIKELASSACKSTDE 616
+T++ + Y+ L ++ L+AG GR + V D ++I+EL +A +
Sbjct: 278 LTMEQIEADFYLNLFSYLKTRVRLSAGYGRSLSSTGVEASVDIKSDIQELMKNATEYLTG 337
Query: 617 LLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEKLTKANANQ 748
L +K I+D + + KA D E++TK+ +
Sbjct: 338 KLEFARKRIEDAKGRIKDAKQTCMKKAAGACDVCEQITKSQIQE 381
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +3
Query: 567 TLKLRSLQVQPVKVQMNYYHKQRSQLMTSQHQQEDQWMISHLKQKAH 707
T + + Q Q + Q H+ Q QHQQ+ Q+ H Q H
Sbjct: 269 TTAITTTQQQQQQQQQQQQHQLHQQHQLHQHQQQHQYQQQHQHQHQH 315
>SB_14707| Best HMM Match : A_deamin (HMM E-Value=0)
Length = 1243
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 588 QVQPVKVQMNYYHKQRSQLMTSQHQQEDQWMISHLKQ 698
Q Q ++ Q +HKQ Q Q QQ Q I H KQ
Sbjct: 263 QRQQLQQQQIQHHKQHLQQQRQQRQQLQQQQIQHHKQ 299
>SB_50449| Best HMM Match : Drf_DAD (HMM E-Value=0.00043)
Length = 801
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = -2
Query: 774 AYYSSFQLLWLALALVNFS---ISSSVLFALDEISSIDLLADVVMSSIDFFVCDNNSSVL 604
AY SS+Q+ +L + NFS SS + + +LL SS FV L
Sbjct: 353 AYQSSYQVFVFSLIMDNFSQAAYQSSYQVFVSSLIMDNLLQAAYQSSYQVFVSSLTMDNL 412
Query: 603 LQAELASS 580
LQA SS
Sbjct: 413 LQAAYQSS 420
>SB_56482| Best HMM Match : HEAT (HMM E-Value=1.9e-16)
Length = 425
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -2
Query: 711 SSVLFALDEISSIDLLADVVMSSIDFFVCDNNSSVLLQAELASSLISVSN 562
+S L LDE+ +D+ + ++F DNN + + ELA L+ +S+
Sbjct: 94 NSFLKDLDELLPLDVRVGYLPVLVEFLSTDNNRNWRFRQELAEQLMYLSD 143
>SB_21913| Best HMM Match : C2 (HMM E-Value=0.31)
Length = 987
Score = 28.3 bits (60), Expect = 8.8
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = -2
Query: 753 LLWLALALVNFSISSSVLFALDEISSIDLLADVVMSSIDFFVCDNNSSVLLQAEL 589
LLW+ALALV F ++ AL S +D + +V ++ + D+ S L +A+L
Sbjct: 860 LLWVALALVQF--AAIYKDALKVFSRVD-FSIIVKDFLNSVITDSKSKALSRAKL 911
>SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05)
Length = 576
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 560 KFDTEIKELASSACKSTDELLSQTKKSIDDIT--TSARRSMDDISSKAKSTLDDIEKLTK 733
K ++ E S D+ T +S D + TS ++ +DD K+ S ++++EK+ +
Sbjct: 148 KLRQKVNEHESCLHAEVDKYFKDTYQSELDASNFTSIKKRLDDFIEKSSSCIENVEKVLQ 207
Query: 734 A 736
A
Sbjct: 208 A 208
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,719,769
Number of Sequences: 59808
Number of extensions: 589342
Number of successful extensions: 1583
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1568
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2538363813
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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