Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_H01
(595 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 126 5e-28
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 115 1e-24
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 111 9e-24
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 111 9e-24
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 108 8e-23
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 103 4e-21
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 96 6e-19
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 93 4e-18
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 92 1e-17
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 91 2e-17
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 90 3e-17
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 89 1e-16
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 87 2e-16
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 85 2e-15
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 84 2e-15
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 82 8e-15
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 81 1e-14
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 79 6e-14
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 77 2e-13
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 77 2e-13
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 77 2e-13
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 73 4e-12
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 72 1e-11
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 68 1e-10
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 67 3e-10
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 66 6e-10
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 64 2e-09
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 59 9e-08
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 54 3e-06
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 48 2e-04
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 46 7e-04
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 44 0.002
UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein ... 34 2.9
UniRef50_Q66KP5 Cluster: LOC446927 protein; n=3; Xenopus|Rep: LO... 33 5.0
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 126 bits (303), Expect = 5e-28
Identities = 60/102 (58%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
Frame = +3
Query: 144 WIL*RQLAS-KSWLRYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHF 320
W+ +LA K YD +WFY R A+ RH+Y+R GV ++TKI+GGR+RNGV PSHF
Sbjct: 33 WVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHF 92
Query: 321 CRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 446
R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 93 SRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 134
Score = 60.9 bits (141), Expect = 2e-08
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +2
Query: 44 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 184
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAP
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAP 47
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 115 bits (276), Expect = 1e-24
Identities = 58/105 (55%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Frame = +3
Query: 135 LSTWIL*RQLASKSWLR-YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 311
L W +L+S + L Y+PDWFYVRCAAILRH+YIR P G+ + K F +KRNGV P
Sbjct: 30 LPDWTDVVKLSSANQLAPYNPDWFYVRCAAILRHLYIR-PTGLTGLCKAFSRKKRNGVKP 88
Query: 312 SHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 446
SH + GS+ RKA+Q +EAL L +K + GGR LT+ GRRDLDR+
Sbjct: 89 SHRSLAHGSVIRKAIQQMEALGLCQKREGGGRSLTSAGRRDLDRL 133
Score = 48.8 bits (111), Expect = 9e-05
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +2
Query: 44 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPI*P 193
M V+VKDV+ VK +A LKKTGKV++P+ D+VK + +LAP P
Sbjct: 1 MAPVSVKDVDGHVFVKALAQFLKKTGKVRLPDWTDVVKLSSANQLAPYNP 50
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 111 bits (268), Expect = 9e-24
Identities = 46/87 (52%), Positives = 65/87 (74%)
Frame = +3
Query: 186 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSL 365
YDPDW+Y R A+I R IY+R +GV KI+GGR+RNG P HFC+SSG+I+R LQ L
Sbjct: 71 YDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQL 130
Query: 366 EALKLVEKVQDGGRILTTQGRRDLDRI 446
+ + +++ GGR++T+QGRRDLD++
Sbjct: 131 QKMGIIDVDPKGGRLITSQGRRDLDQV 157
Score = 40.7 bits (91), Expect = 0.025
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 20/66 (30%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKV--------------------KVPEHMDLVKTARFKE 175
TVKDV + VK +AHLK++GK+ ++PE +D+VKTARFKE
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKLFVASQELLLLGNLRISFYQMELPEWVDIVKTARFKE 67
Query: 176 LAPI*P 193
L P P
Sbjct: 68 LPPYDP 73
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 111 bits (268), Expect = 9e-24
Identities = 46/87 (52%), Positives = 65/87 (74%)
Frame = +3
Query: 186 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSL 365
YDPDW+Y R A+I R IY+R +GV KI+GGR+RNG P HFC+SSG+I+R LQ L
Sbjct: 51 YDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQL 110
Query: 366 EALKLVEKVQDGGRILTTQGRRDLDRI 446
+ + +++ GGR++T+QGRRDLD++
Sbjct: 111 QKMGIIDVDPKGGRLITSQGRRDLDQV 137
Score = 60.5 bits (140), Expect = 3e-08
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPI*P 193
TVKDV + VK +AHLK++GK+++PE +D+VKTARFKEL P P
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDP 53
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 108 bits (260), Expect = 8e-23
Identities = 48/87 (55%), Positives = 63/87 (72%)
Frame = +3
Query: 186 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSL 365
YDPDW+YVR AAI RHIY+R VGV + K++GG G+ PSH SGS+ RK +QSL
Sbjct: 48 YDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSL 107
Query: 366 EALKLVEKVQDGGRILTTQGRRDLDRI 446
E + ++EK +GGR ++ QG+RDLDRI
Sbjct: 108 EKIGVLEKSDNGGRRISQQGQRDLDRI 134
Score = 52.4 bits (120), Expect = 8e-06
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +2
Query: 44 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPI*P 193
M V+VKDV+ K + AA LK++GK+ P+ +D+VKT KELAP P
Sbjct: 1 MAGVSVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDP 50
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 103 bits (246), Expect = 4e-21
Identities = 46/77 (59%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = +3
Query: 189 DPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLE 368
D DW+YVR A++ R +YIRSP GV + +++G KR GVTP+HF ++SGS+ RKALQ+LE
Sbjct: 50 DSDWYYVRTASVARRLYIRSPTGVGALRRVYGSNKRRGVTPNHFAKASGSVIRKALQTLE 109
Query: 369 ALKLVEKVQDG-GRILT 416
A+K VEK DG GRILT
Sbjct: 110 AIKWVEKHPDGNGRILT 126
Score = 50.0 bits (114), Expect = 4e-05
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +2
Query: 68 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPI 187
++Q +IV+ +A LKK+GKVKVPE DLVK KELAP+
Sbjct: 10 IDQHEIVRQIAGFLKKSGKVKVPEWSDLVKLGITKELAPV 49
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 95.9 bits (228), Expect = 6e-19
Identities = 45/105 (42%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Frame = +3
Query: 144 WIL*RQLASKSWLRYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFC 323
W + + + K + DPDW+Y+R A+I R +Y+R GV ++ K++GG R GV HF
Sbjct: 43 WDVVKTASFKEYSPADPDWYYIRAASIARKVYLRQYTGVGSLKKVYGGAARKGVHRQHFQ 102
Query: 324 RSSGSIARKALQSLEALKLVEK----VQDGGRILTTQGRRDLDRI 446
++SG + R LQ LE +K+VEK V GGR +T+ G++DLDRI
Sbjct: 103 KASGGLIRHILQQLEEMKVVEKCPEGVNKGGRKITSHGQQDLDRI 147
Score = 55.6 bits (128), Expect = 8e-07
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +2
Query: 44 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPI*P 193
+R VTV+DV+ + +K A HLK++GK+++P D+VKTA FKE +P P
Sbjct: 10 VRGVTVRDVKPAEFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADP 59
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 93.1 bits (221), Expect = 4e-18
Identities = 44/92 (47%), Positives = 58/92 (63%)
Frame = +3
Query: 171 KSWLRYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARK 350
K L DW+Y R A+ILR +YI PVG++ + +GGRK G P F ++ GSI RK
Sbjct: 41 KERLPEQEDWWYYRVASILRRVYIDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRK 100
Query: 351 ALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 446
ALQ LEA +EKV GR++T +GR LD+I
Sbjct: 101 ALQQLEAAGFIEKVPGKGRVVTPKGRSFLDKI 132
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 91.9 bits (218), Expect = 1e-17
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Frame = +3
Query: 189 DPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLE 368
D DW+YVR AA+ RHIY+R VGV + K+ G K G P+H +SGS+ RK +QSLE
Sbjct: 123 DSDWYYVRAAAVARHIYMRKTVGVGRLRKVHGSTKNRGSRPNHHVDASGSVDRKIIQSLE 182
Query: 369 ALKLVEKVQD-GGRILTTQGRRDLDRI 446
+ ++E ++ GGR +T G+RDLDRI
Sbjct: 183 KIGVLEYDEEKGGRRITQAGQRDLDRI 209
Score = 33.5 bits (73), Expect = 3.8
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 47 RSVTVKDVE---QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 184
+++ ++DVE K + +A LK+ GK+ +P +D VKT+ EL P
Sbjct: 73 QNLQIEDVEILTAQKFIAAYSAFLKRQGKLPIPGWVDTVKTSCSNELPP 121
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/92 (44%), Positives = 59/92 (64%)
Frame = +3
Query: 165 ASKSWLRYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIA 344
AS+ YDPDW Y+R A+I R +YIR +G KI+G RKR G+ P +SSG +
Sbjct: 48 ASRELAPYDPDWLYIRIASIARKLYIRGGIGTGEFRKIYGDRKRRGMKPCRSSKSSGGLI 107
Query: 345 RKALQSLEALKLVEKVQDGGRILTTQGRRDLD 440
R +LQ LE L + EK + GGR +T++G+ ++D
Sbjct: 108 RYSLQQLEKLGVAEKDERGGRRITSKGQSEMD 139
Score = 49.6 bits (113), Expect = 5e-05
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPI*P 193
TVKDV + V T A+HLK+ G +++P +D +KTA +ELAP P
Sbjct: 12 TVKDVPAAEFVNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDP 57
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 90.2 bits (214), Expect = 3e-17
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +3
Query: 189 DPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLE 368
+PDW Y R A + R +YIR GV T ++FGG +RNGV P+HF +G R L+ L+
Sbjct: 51 NPDWIYYRIATLARKVYIRGGDGVATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQ 110
Query: 369 ALKLVE-KVQDGGRILTTQGRRDLDRI 446
LK++E GGR +T GRRDLDRI
Sbjct: 111 NLKVIETDAVKGGRTITATGRRDLDRI 137
Score = 49.2 bits (112), Expect = 7e-05
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +2
Query: 50 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPI*P 193
+VT+KDV + + T A LKKTG+V++P+ D+ KTA ++EL P P
Sbjct: 5 AVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNP 52
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 88.6 bits (210), Expect = 1e-16
Identities = 40/85 (47%), Positives = 59/85 (69%)
Frame = +3
Query: 189 DPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLE 368
+PDW+YVR AA+LR +YI PVGV ++ +GG+K G P F R SG+I R+ALQ LE
Sbjct: 47 NPDWWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLE 106
Query: 369 ALKLVEKVQDGGRILTTQGRRDLDR 443
L+++ ++ GR++T +GR LD+
Sbjct: 107 ESGLIKR-EENGRVITPEGRSFLDK 130
Score = 38.7 bits (86), Expect = 0.10
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 184
TV DV D ++ VA LK KVK PE ++ VKT KE P
Sbjct: 3 TVYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRP 45
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 87.4 bits (207), Expect = 2e-16
Identities = 40/84 (47%), Positives = 56/84 (66%)
Frame = +3
Query: 189 DPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLE 368
DPDW+Y+R A+ILR +Y+ PVGV + +GGR+ G P F + SG+I RK LQ LE
Sbjct: 47 DPDWWYMRAASILRRVYMDGPVGVSRLRTYYGGRQDRGARPERFRKGSGAIIRKILQQLE 106
Query: 369 ALKLVEKVQDGGRILTTQGRRDLD 440
LVEK ++ GR++T +GR +D
Sbjct: 107 EAGLVEKTEE-GRVVTPEGRSLVD 129
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 84.6 bits (200), Expect = 2e-15
Identities = 36/80 (45%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +3
Query: 189 DPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLE 368
DPDWFY+R AA+LRH+Y GV + K++ +KRNG P+H CR+SG I R +Q LE
Sbjct: 71 DPDWFYIRAAAVLRHLYFHPDSGVDRLRKVYSSKKRNGSAPNHTCRASGKILRTIVQQLE 130
Query: 369 ALKLVEK-VQDGGRILTTQG 425
++ +E+ ++ GR L+ +G
Sbjct: 131 SIGFLEQDLKKHGRRLSRKG 150
Score = 40.3 bits (90), Expect = 0.033
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 50 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 184
+ ++KD D VK A H+K G ++ P+ +D KT+ KELAP
Sbjct: 25 NTSLKDCNPDLFVKAFAEHMKLKGYLECPKRLDYAKTSVAKELAP 69
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 84.2 bits (199), Expect = 2e-15
Identities = 38/84 (45%), Positives = 55/84 (65%)
Frame = +3
Query: 195 DWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 374
DW+Y+R A+I R +YI PVG++ + +GGRKR G P F + SG+I R AL LE L
Sbjct: 47 DWWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPPKFRKGSGAIVRNALHQLEQL 106
Query: 375 KLVEKVQDGGRILTTQGRRDLDRI 446
V+K ++ GR++T GR LD++
Sbjct: 107 GFVKKTRE-GRVVTPMGRSFLDKV 129
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 82.2 bits (194), Expect = 8e-15
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 189 DPDWFYVRCAAILRHIYIR-SPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSL 365
D DW+YVR A+ILR +Y P+G++T I+GGR+ G P HF ++ GS+ RK LQ L
Sbjct: 48 DRDWWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAGGSVPRKILQQL 107
Query: 366 EALKLVEKVQDGGRILTTQGRRDLD 440
E LV KV GR ++ GR LD
Sbjct: 108 EEAGLVVKVPGRGRTISPAGRSLLD 132
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 81.4 bits (192), Expect = 1e-14
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = +3
Query: 195 DWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 374
DW++ RCA+I+R IY+ P+G+ + K +GG K +G +H + G+I R A+ LE L
Sbjct: 48 DWWHTRCASIMRKIYLHGPIGINELRKDYGGGKPSGYGAAHHKDAGGAIIRNAIHGLEKL 107
Query: 375 KLVEKVQDGGRILTTQGRRDLDRI 446
+EKV+ GRI++ QG + LDR+
Sbjct: 108 GYLEKVEKKGRIVSKQGMQKLDRL 131
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 79.4 bits (187), Expect = 6e-14
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +3
Query: 189 DPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLE 368
DP WFY+R AAILRH+Y G+ + +++ RKR G P+H C +SG I R +Q LE
Sbjct: 71 DPKWFYIRSAAILRHLYFHPDEGIGRLRRVYASRKRRGCAPNHTCPASGKIIRTIVQQLE 130
Query: 369 ALKLVEKVQDG-GRILTTQG 425
A +EK +D GR L+ +G
Sbjct: 131 ANGFLEKSKDNKGRRLSRRG 150
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 77.4 bits (182), Expect = 2e-13
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +3
Query: 165 ASKSWLRYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIA 344
+SK + DW Y+R A+ILRH+Y+R VGV ++K +G ++RNG +H +S I
Sbjct: 54 SSKELPPQNSDWLYIRAASILRHLYVRPNVGVGALSKFYGRKQRNGTARNHSAVASRGII 113
Query: 345 RKALQSLEALKLVE-KVQDGGRILTTQGRRDLDRI 446
R L L++L LVE G R L+ QG+R+LD I
Sbjct: 114 RYCLIQLQSLGLVEFNPNTGTRRLSPQGQRELDSI 148
Score = 41.9 bits (94), Expect = 0.011
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 184
T KDV +++ A LKK GK+ +PE +D VKTA KEL P
Sbjct: 18 TAKDVPAGILIEKFAQQLKKGGKMTMPEWVDHVKTASSKELPP 60
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 77.4 bits (182), Expect = 2e-13
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +3
Query: 189 DPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLE 368
DPDW++ R AA+LR +Y+ P+GV+ + +GG K G P+ F + SGS+ RKALQ LE
Sbjct: 47 DPDWWFTRAAAVLRRVYVDGPLGVERMRSFYGGSKNRGSKPNAFRKGSGSVLRKALQQLE 106
Query: 369 ALKLVEKVQD-GGRILTTQGRRDLDRI 446
A L+ V D GR ++ G LD +
Sbjct: 107 AAGLI--VHDKTGRKVSPAGMAFLDSV 131
Score = 34.7 bits (76), Expect = 1.7
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 184
TV DV D +++ VA LKK ++K P KT KE+ P
Sbjct: 3 TVYDVPADHLIRKVAEELKKRQEIKPPAWAAFAKTGVHKEMPP 45
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 77.4 bits (182), Expect = 2e-13
Identities = 35/86 (40%), Positives = 53/86 (61%)
Frame = +3
Query: 189 DPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLE 368
+PDW Y+R AAI R +Y+ + +GV + + +G + PSH SG + R LQ LE
Sbjct: 50 NPDWIYIRAAAIARKVYLNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLE 109
Query: 369 ALKLVEKVQDGGRILTTQGRRDLDRI 446
+ +V K+Q GR LT +GR+D+D+I
Sbjct: 110 KMGIVGKIQ-SGRSLTKEGRKDMDKI 134
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +2
Query: 59 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPI*P 193
+KDV +K A HLKK+GK+++PE +D VKT KELAP+ P
Sbjct: 7 IKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNP 51
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 73.3 bits (172), Expect = 4e-12
Identities = 31/86 (36%), Positives = 53/86 (61%)
Frame = +3
Query: 189 DPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLE 368
D W++ RCA+++R IY+ P+G+ + +GG K G ++ ++ G+I R A+ LE
Sbjct: 40 DRAWWHTRCASLMRKIYLHGPIGINGLRSEYGGGKPRGYGAANHRKAGGAIIRNAVHGLE 99
Query: 369 ALKLVEKVQDGGRILTTQGRRDLDRI 446
L +EK+ GRI++ QG + LDR+
Sbjct: 100 KLGYIEKLDKKGRIVSRQGMQKLDRL 125
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 71.7 bits (168), Expect = 1e-11
Identities = 36/86 (41%), Positives = 49/86 (56%)
Frame = +3
Query: 189 DPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLE 368
+PDW+Y+RCAA+LR IY+R VG ++K FG +K G P H SS A +SL
Sbjct: 74 NPDWYYIRCAAVLRAIYLRPGVGYGGLSKRFGNKKNYGSRPEHTVTSSTGPLHWACKSLT 133
Query: 369 ALKLVEKVQDGGRILTTQGRRDLDRI 446
L LVE G+ LT +G + D +
Sbjct: 134 KLGLVEPGAQSGQRLTRKGHKFADSL 159
Score = 42.3 bits (95), Expect = 0.008
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +2
Query: 32 HKV-KMRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 184
H++ K + T+KDV + +KT A H K+ GK+ VP +++K++ +E AP
Sbjct: 21 HRIGKRKGATLKDVSAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGRERAP 72
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 68.1 bits (159), Expect = 1e-10
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Frame = +3
Query: 189 DPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLE 368
D DW YVR AA+ R IY+R GV +T +FG NG S SG + R LQ LE
Sbjct: 101 DQDWMYVRAAALARKIYVRGHWGVGNLTHMFGSVNDNGKHES----GSGKVIRYLLQQLE 156
Query: 369 ALKLVEK-----VQDGGRILTTQGRRDLDRI 446
+K+++K ++ G RI+T +G++DL+RI
Sbjct: 157 TIKVLKKDNKSLLKKGSRIVTKEGQQDLNRI 187
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPI 187
TVKDV ++ A +LKK K+K+PE +VKT KE +PI
Sbjct: 57 TVKDVPAQDFIRGYAEYLKKNNKIKIPEWASIVKTGLGKETSPI 100
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 66.9 bits (156), Expect = 3e-10
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +3
Query: 189 DPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLE 368
D DW++++ ++ILR +YI +GV + + F ++R GV P+H +SG I R LQ LE
Sbjct: 93 DEDWYFIKTSSILRRLYIHPDIGVGFLRRQFSYKQRRGVAPNHTSLASGKILRSILQQLE 152
Query: 369 ALKLVEK-VQDGGRILTTQGRRDLD 440
+ VE+ + GR LTT+G ++
Sbjct: 153 NIGYVEQNPKKKGRRLTTKGENAIN 177
Score = 34.7 bits (76), Expect = 1.7
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 59 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPI 187
+KDV+ + + A +LK K+ P+ + VKT + ++LAP+
Sbjct: 50 IKDVDAELFISAYAKYLKLHNKITFPKWCNFVKTGKGRKLAPL 92
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 66.1 bits (154), Expect = 6e-10
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +3
Query: 294 RNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 446
R+ V PSHF R S S A + LQ+LE LK+VEK QDGGR L QG+RDLDRI
Sbjct: 207 RHRVRPSHFSRGSKSAACRVLQALEGLKMVEKDQDGGRKLIPQGQRDLDRI 257
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +2
Query: 74 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 184
Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAP
Sbjct: 156 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAP 192
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 64.5 bits (150), Expect = 2e-09
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Frame = +3
Query: 189 DPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLE 368
D DW Y+R AA+ R +Y++ G+ T+ IFG K G + G I R AL+SLE
Sbjct: 53 DSDWVYIRTAALARKVYLKPHTGISTLKHIFGSNKDRGNLRNKHQACHGKILRWALKSLE 112
Query: 369 ALKLVEKVQDG-----GRILTTQGRRDLDRI 446
LK++ K ++ R++T +G +L+RI
Sbjct: 113 DLKIIRKDKNSATKKFSRVITKEGMTELNRI 143
Score = 39.5 bits (88), Expect = 0.058
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 184
TVKDV ++ A+HLKK K+ +PE T+ +ELAP
Sbjct: 9 TVKDVAAADFIREYASHLKKANKLSIPEFTQWTTTSVARELAP 51
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 58.8 bits (136), Expect = 9e-08
Identities = 32/82 (39%), Positives = 44/82 (53%)
Frame = +3
Query: 195 DWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 374
DW YVR A++LR +YI +G+ ++ +GG+ G H S SI R LE+
Sbjct: 49 DWIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRGSKRYHAASGSRSITRFLFHELESA 108
Query: 375 KLVEKVQDGGRILTTQGRRDLD 440
LV+K Q GR L+ QG LD
Sbjct: 109 GLVQKTQK-GRSLSPQGMSLLD 129
Score = 33.9 bits (74), Expect = 2.9
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 53 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPI 187
V+VK V D ++ V+ LK+ K+K P + VKT KE P+
Sbjct: 2 VSVKYVPSDMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPPL 46
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 54.0 bits (124), Expect = 3e-06
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +3
Query: 195 DWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 374
+W+Y+R AA+ R IY+ + + +G + P H +S + R LQ LE
Sbjct: 58 NWWYIRAAAVTRQIYLHHDASLSGLAFHYGANMKAVTMPKHHHEASRKVIRTILQQLEKA 117
Query: 375 KLVEKVQDGGRILTTQGRRDLDRI 446
LV +V + GR LT +G++ LD+I
Sbjct: 118 GLV-RVAEKGRQLTPKGQKLLDQI 140
Score = 39.5 bits (88), Expect = 0.058
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 35 KVKMRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 184
K + +++ D +V +A H + T ++ PE DLVKTA K+LAP
Sbjct: 5 KTGHKGFQAREIAADVLVNALAKHYQDTQVIRNPEWADLVKTASLKQLAP 54
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 47.6 bits (108), Expect = 2e-04
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = +3
Query: 168 SKSWLRYDPD---WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGS 338
S S +Y P+ W + R A+I+ YI +G + + +I+ G+K+ S SG
Sbjct: 38 SSSLKKYSPNQSNWIFKRMASIIIKFYIYKKLGTRQLVRIYNGKKKG--RRSKKTNGSGK 95
Query: 339 IARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 440
I R +++ LE +K+++K + G L+ + + ++D
Sbjct: 96 IIRFSIKELEKMKILKKDESGRFGLSKKAQNEID 129
Score = 33.5 bits (73), Expect = 3.8
Identities = 11/42 (26%), Positives = 27/42 (64%)
Frame = +2
Query: 59 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 184
+KD+ +D + A L+K+G++ +P +++ K++ K+ +P
Sbjct: 5 LKDIPKDVFINYYAEFLEKSGQINIPSWIEICKSSSLKKYSP 46
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 46.0 bits (104), Expect = 7e-04
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3
Query: 285 GRKRNGVTPSHFCRSSGSIARKALQSLEALK 377
GR+RNGV PSHF R S ++AR+ LQ+LE LK
Sbjct: 77 GRQRNGVRPSHFNRGSKTVARRVLQALEGLK 107
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +3
Query: 195 DWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRN----GVTPSHFCRSSGSIARKALQS 362
D++YVR A++LR + P+G++ + +G +KR V P S + R +LQ+
Sbjct: 59 DFWYVRSASLLRKVAQNEPIGIERLATEYGSKKRGSNRYSVRPGEHEGGSRKLIRASLQA 118
Query: 363 LEALKLVEKVQDGGRILTTQGRRDLDRI 446
LE LV GR ++ G L +
Sbjct: 119 LEEDGLVTTAAGEGRRISDDGEAFLSEV 146
>UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 390
Score = 34.7 bits (76), Expect = 1.7
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 274 RSLVGA-NVMELHLHISAGHQAVLHARLCNRWRH 372
R+L GA +E H +AG + +HAR+ RWRH
Sbjct: 190 RALAGAAGAVEQHRRQAAGQRIFMHARIAQRWRH 223
>UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein
isoform 1; n=2; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 1 - Pan troglodytes
Length = 180
Score = 33.9 bits (74), Expect = 2.9
Identities = 22/86 (25%), Positives = 44/86 (51%)
Frame = -3
Query: 443 SVKVSSTLCGENATTVLNFLNKLQCLQRLQSLACNTA**PAEM*RCNSITFAPTKDLGDS 264
SV++S +L + A +L + Q LQ L+ A +T AE+ ++++ DLG
Sbjct: 25 SVQISLSLRCQFAAAILVLFHHFQPLQGLEDPAGHTLGASAEVAGHDAVSLTSPIDLGHG 84
Query: 263 LYSNR*ANVNMTKDGSTTHIEPIRVI 186
+ V + + GS++ +EP+ ++
Sbjct: 85 ANPSATPEVQVPRCGSSSRVEPVLIV 110
>UniRef50_Q66KP5 Cluster: LOC446927 protein; n=3; Xenopus|Rep:
LOC446927 protein - Xenopus laevis (African clawed frog)
Length = 353
Score = 33.1 bits (72), Expect = 5.0
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 209 ALCCHPSSYLH-SLTCWSKDCHQDLWWAQT*WSYTFT-FLQVIRQYCTQGFAIVGGIEAC 382
A+C ++H SL+C + C +Y F V+R C +GF ++G +
Sbjct: 70 AVCSSAGIWIHASLSCARRQCSLSDTLENGDITYENNKFQNVVRFSCKEGFVLIGANSST 129
Query: 383 *ESSGRWSHS 412
SG+W+ S
Sbjct: 130 CNESGKWNES 139
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,587,424
Number of Sequences: 1657284
Number of extensions: 9804640
Number of successful extensions: 24867
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 24079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24849
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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