Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_G15
         (836 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1736 + 29130118-29130294,29130649-29130703,29130837-291310...    29   4.6  
02_04_0221 - 21021886-21022144,21022227-21022345,21022681-210229...    29   4.6  
08_02_1063 + 24024030-24024506,24024803-24024856,24024965-240251...    28   8.0  

>07_03_1736 +
           29130118-29130294,29130649-29130703,29130837-29131048,
           29131201-29131322,29131406-29131559,29131849-29131918,
           29132007-29132152,29132238-29132310,29132366-29132418,
           29132514-29132658,29132945-29133063,29133171-29133242,
           29133336-29133439,29133695-29133751,29133861-29134059,
           29134169-29134312,29134418-29134537
          Length = 673

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 477 TATAVVFWQWVNQSFNALVNYTNRNANSPLTTKQMGVAYVSATS 608
           TA+   F +W    F+   + TN N+   LTT + GV ++   S
Sbjct: 189 TASKKQFAKWTKIEFHLKSSQTNTNSRLQLTTSKSGVIWLDQVS 232


>02_04_0221 -
           21021886-21022144,21022227-21022345,21022681-21022920,
           21023064-21023171,21023272-21023331,21023991-21024066,
           21024155-21024360,21024722-21024784,21024925-21025012,
           21025515-21026015,21027206-21027603
          Length = 705

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 22/65 (33%), Positives = 29/65 (44%)
 Frame = -2

Query: 424 NDILPKTFCSSPLSGWNADS*SCFALITCSNFVPGCSRPAL*FRYNSLASYSSFSEAIDS 245
           N  LP + CSSPL  +   + SC    T     PG S  A  +  N L + S  S A+  
Sbjct: 628 NMSLPVSPCSSPLRQFKQSNWSCLPSPTHPALSPGLSAAA--YPNNPLQNQSRRSAAVPD 685

Query: 244 SGLEM 230
             LE+
Sbjct: 686 PWLEL 690


>08_02_1063 +
           24024030-24024506,24024803-24024856,24024965-24025118,
           24025314-24025388,24025511-24025788,24026023-24026253,
           24026522-24026620,24026740-24026889,24027830-24027976,
           24028525-24028575,24028647-24028819,24029018-24029147,
           24029361-24029458,24029655-24029892,24030634-24030837,
           24031003-24031083,24031296-24031535
          Length = 959

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 744 RSASLAGCLPS*RPPPRRT 688
           R +   GCLP   PPPRRT
Sbjct: 37  RGSGACGCLPPAPPPPRRT 55


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,077,369
Number of Sequences: 37544
Number of extensions: 508782
Number of successful extensions: 1037
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)