Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_G15
(836 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29082-7|AAA68404.3| 319|Caenorhabditis elegans Hypothetical pr... 200 1e-51
Z66565-1|CAA91477.1| 324|Caenorhabditis elegans Hypothetical pr... 173 1e-43
Z48009-1|CAA88076.1| 329|Caenorhabditis elegans Hypothetical pr... 172 3e-43
Z81534-3|CAB04347.3| 328|Caenorhabditis elegans Hypothetical pr... 170 1e-42
Z69902-2|CAA93764.1| 326|Caenorhabditis elegans Hypothetical pr... 169 2e-42
AL021175-7|CAE54921.1| 329|Caenorhabditis elegans Hypothetical ... 147 7e-36
AL021175-8|CAA15970.2| 201|Caenorhabditis elegans Hypothetical ... 127 1e-29
Z48045-8|CAI46557.1| 331|Caenorhabditis elegans Hypothetical pr... 91 1e-18
AC024775-7|AAK68451.1| 251|Caenorhabditis elegans Hypothetical ... 30 1.8
U40947-5|AAC48070.1| 505|Caenorhabditis elegans Inward rectifyi... 29 5.4
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 28 9.5
>U29082-7|AAA68404.3| 319|Caenorhabditis elegans Hypothetical
protein C14F5.4 protein.
Length = 319
Score = 200 bits (488), Expect = 1e-51
Identities = 100/223 (44%), Positives = 138/223 (61%)
Frame = +3
Query: 168 DITQPLWDQSTFVGRFRHFAFISNPLLSMASXXXXXXXXXXXXXXXAGREQPGTKLEQVI 347
D QP +DQSTF GR RHFA +++PL++ +S + P T LE++
Sbjct: 4 DPDQPRYDQSTFYGRLRHFAGMTDPLIAFSSTTELITASELMQKCREKKPVPAT-LEELH 62
Query: 348 KAKQLYESAFHPDSGELQNVFGRMSFQMPGGCLITGAMLQWYRTATAVVFWQWVNQSFNA 527
++++L +SAFHPD+GELQN GRM F + GG ++ GAM+ WY++ AV+FWQW NQSFNA
Sbjct: 63 RSQRLCQSAFHPDTGELQNFAGRMCFNVWGGTMLCGAMMIWYKSTPAVIFWQWANQSFNA 122
Query: 528 LVNYTNRNANSPLTTKQMGVAYVSATSAAMTTALIFKFGVQKRAKNPILXXXXXXXXXXX 707
LVNYTNRNA S LTTK + V+Y +A S A+ A+ K K+ +P+
Sbjct: 123 LVNYTNRNAKSTLTTKDLVVSYSTAVSGALAMAIGLKTYFAKKQSSPLAQRLVPLGAVAV 182
Query: 708 XNWVNIPLMRQNEIILGLDVSDESGRVIGKSXIAPVKGISQVV 836
N +NIP+MRQNE+ G+ V+D G +G S +A K IS VV
Sbjct: 183 ANAINIPMMRQNELKEGMTVTDADGNNVGVSRLAAAKAISLVV 225
>Z66565-1|CAA91477.1| 324|Caenorhabditis elegans Hypothetical
protein T04F8.1 protein.
Length = 324
Score = 173 bits (421), Expect = 1e-43
Identities = 94/225 (41%), Positives = 129/225 (57%)
Frame = +3
Query: 162 RIDITQPLWDQSTFVGRFRHFAFISNPLLSMASXXXXXXXXXXXXXXXAGREQPGTKLEQ 341
R DI++P WDQSTF GR +HF I+NPL G L Q
Sbjct: 11 RPDISKPKWDQSTFEGRAKHFFAITNPLNLFHGEKQLDEFKKIVEDYRKGSVSNDLTLNQ 70
Query: 342 VIKAKQLYESAFHPDSGELQNVFGRMSFQMPGGCLITGAMLQWYRTATAVVFWQWVNQSF 521
+ KAK + +SAFHP +GE + GRMS Q+P ITG ML +Y++ AV+FWQW+NQSF
Sbjct: 71 LWKAKHVVDSAFHPSTGEKMMMVGRMSAQVPMNMAITGGMLTFYKSPMAVIFWQWLNQSF 130
Query: 522 NALVNYTNRNANSPLTTKQMGVAYVSATSAAMTTALIFKFGVQKRAKNPILXXXXXXXXX 701
NA+VNYTNR+ + + Q+ V+Y +AT A+T AL V+K P++
Sbjct: 131 NAVVNYTNRSGDGG-SVSQLLVSYCAATGGALTAALGLNSLVKKAP--PLVGRLVPFVAV 187
Query: 702 XXXNWVNIPLMRQNEIILGLDVSDESGRVIGKSXIAPVKGISQVV 836
N +NIP+MR+ E+ G+D+ DE+G+VIG+S ISQVV
Sbjct: 188 CVANSINIPMMRRGELTEGIDILDENGQVIGQSPGVAQSAISQVV 232
>Z48009-1|CAA88076.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.2 protein.
Length = 329
Score = 172 bits (418), Expect = 3e-43
Identities = 92/224 (41%), Positives = 125/224 (55%), Gaps = 2/224 (0%)
Frame = +3
Query: 168 DITQPLWDQSTFVGRFRHFAFISNPLLSMASXXXXXXXXXXXXXXXAGREQPGTKLEQVI 347
DI++P WDQ T+ GR +HF +NPL +S G P ++++
Sbjct: 13 DISKPKWDQGTYAGRAKHFFSSTNPLTLFSSRIQQEKCKEIVTNYKTGVISPTLTVDELW 72
Query: 348 KAKQLYESAFHPDSGELQNVFGRMSFQMPGGCLITGAMLQWYRTATAVVFWQWVNQSFNA 527
KAK LY+S +HPD+GE GRMS QMPG + TG +L YRT VVF W NQSFNA
Sbjct: 73 KAKTLYDSTYHPDTGEKMFFLGRMSAQMPGNMVTTGMLLGLYRTLPGVVFSHWFNQSFNA 132
Query: 528 LVNYTNRNANSPLTTKQMGVAYVSATSAAMTTALIFKFGVQKRAKNP--ILXXXXXXXXX 701
+VNYTNR+ NS T +++ V+Y ATS AMT AL G+ K KN +
Sbjct: 133 VVNYTNRSGNSKATNERLFVSYCCATSGAMTVAL----GLNKMVKNSHGLAARLVPFAAI 188
Query: 702 XXXNWVNIPLMRQNEIILGLDVSDESGRVIGKSXIAPVKGISQV 833
N +NIP+MR NE G+++ DE+ +++GKS I+QV
Sbjct: 189 ALANAINIPMMRSNEASEGMELKDENDQLVGKSQKMAALSIAQV 232
>Z81534-3|CAB04347.3| 328|Caenorhabditis elegans Hypothetical
protein F37H8.4 protein.
Length = 328
Score = 170 bits (413), Expect = 1e-42
Identities = 87/224 (38%), Positives = 123/224 (54%)
Frame = +3
Query: 162 RIDITQPLWDQSTFVGRFRHFAFISNPLLSMASXXXXXXXXXXXXXXXAGREQPGTKLEQ 341
R DI++P W Q T+ GR RHF ++NPL +S G+ P + +
Sbjct: 11 RPDISKPQWSQRTYYGRVRHFFTLTNPLTLTSSVARQEQCRQIVLDYKNGKVSPTLTVSE 70
Query: 342 VIKAKQLYESAFHPDSGELQNVFGRMSFQMPGGCLITGAMLQWYRTATAVVFWQWVNQSF 521
+ KAK LY+S +HPD+GE GRMS QMP LI G +L YRT VVF W+NQSF
Sbjct: 71 LWKAKTLYDSTYHPDTGEKMFFLGRMSAQMPANMLINGMLLSLYRTFPGVVFSHWINQSF 130
Query: 522 NALVNYTNRNANSPLTTKQMGVAYVSATSAAMTTALIFKFGVQKRAKNPILXXXXXXXXX 701
NA+VNYTNR+ NS + +++ ++Y AT AM AL + KN I
Sbjct: 131 NAVVNYTNRSGNSKTSNERLILSYSCATGGAMAAAL--SLNAMVKNKNSIAARLVPFAAV 188
Query: 702 XXXNWVNIPLMRQNEIILGLDVSDESGRVIGKSXIAPVKGISQV 833
N +NIP++R NE+ GL++ DE+G ++ +S + I+QV
Sbjct: 189 ALANTINIPMIRSNEVTEGLELRDENGELLARSRQMAILSIAQV 232
>Z69902-2|CAA93764.1| 326|Caenorhabditis elegans Hypothetical
protein C47D12.3 protein.
Length = 326
Score = 169 bits (412), Expect = 2e-42
Identities = 89/224 (39%), Positives = 125/224 (55%), Gaps = 1/224 (0%)
Frame = +3
Query: 168 DITQPLWDQSTFVGRFRHFAFISNPLLSMASXXXXXXXXXXXXXXXAGREQPGTKLEQVI 347
DI++P WDQ+TF GR +F +N L S G+ P ++++
Sbjct: 13 DISRPRWDQNTFQGRVNYFFSTANCLNLFVSNAKLEKARNIVLEYKQGKYDPNMTVDELW 72
Query: 348 KAKQLYESAFHPDSGELQNVFGRMSFQMPGGCLITGAMLQWYRTATAVVFWQWVNQSFNA 527
KAK LY+SAFHPD+GE + GRMS Q+P LITG ML +Y+ V+F+ WVNQSFNA
Sbjct: 73 KAKTLYDSAFHPDTGEKMFILGRMSAQVPCNMLITGGMLTFYQKLPHVIFFHWVNQSFNA 132
Query: 528 LVNYTNRNANSPLTTKQMGVAYVSATSAAMTTALIFKFGVQK-RAKNPILXXXXXXXXXX 704
+VNYTNR+ + + ++Y AT+ A++ AL F + ++K + PIL
Sbjct: 133 IVNYTNRSGTHKQDDRTLILSYCGATTGALSCALSFNYMLKKWKNAPPILARLVPFAAIA 192
Query: 705 XXNWVNIPLMRQNEIILGLDVSDESGRVIGKSXIAPVKGISQVV 836
N +NIP+MR E G+ V D GR +G S +AP I QVV
Sbjct: 193 FANAINIPMMRNKEFTNGIPVEDGEGRTMGFSTVAPGHAIPQVV 236
>AL021175-7|CAE54921.1| 329|Caenorhabditis elegans Hypothetical
protein Y6E2A.9a protein.
Length = 329
Score = 147 bits (357), Expect = 7e-36
Identities = 79/224 (35%), Positives = 115/224 (51%), Gaps = 2/224 (0%)
Frame = +3
Query: 168 DITQPLWDQSTFVGRFRHFAFISNPLLSMASXXXXXXXXXXXXXXXAGREQPGTKLEQVI 347
DI++ WD T+ GR +H+ +NP+ S G P ++++
Sbjct: 13 DISKSKWDLDTYSGRVKHYFASANPMTLFTSSNTQEMCRKIVVDYKKGIINPELTMDELW 72
Query: 348 KAKQLYESAFHPDSGELQNVFGRMSFQMPGGCLITGAMLQWYRTATAVVFWQWVNQSFNA 527
AK LY+S +HPD+GE GRMS Q P +ITG +L YRT ++F W+NQSFNA
Sbjct: 73 SAKILYDSVYHPDTGEKMFCLGRMSAQTPANMVITGMLLSCYRTCPGIIFSHWINQSFNA 132
Query: 528 LVNYTNRNANSPLTTKQMGVAYVSATSAAMTTALIFKFGVQKRAKNP--ILXXXXXXXXX 701
+VNYTNR+ N T +Q+ +Y AT AA T AL G+ KN +
Sbjct: 133 IVNYTNRSGNCRTTNQQLLYSYFCATGAATTAAL----GLNMMVKNSHGLAGRLVPFVAV 188
Query: 702 XXXNWVNIPLMRQNEIILGLDVSDESGRVIGKSXIAPVKGISQV 833
N +NIP++R NE+ G+++ DE ++ KS I+QV
Sbjct: 189 AVANAINIPMVRANELSEGIELCDEDDHLVAKSKQLAALAIAQV 232
>AL021175-8|CAA15970.2| 201|Caenorhabditis elegans Hypothetical
protein Y6E2A.9b protein.
Length = 201
Score = 127 bits (306), Expect = 1e-29
Identities = 61/154 (39%), Positives = 85/154 (55%)
Frame = +3
Query: 168 DITQPLWDQSTFVGRFRHFAFISNPLLSMASXXXXXXXXXXXXXXXAGREQPGTKLEQVI 347
DI++ WD T+ GR +H+ +NP+ S G P ++++
Sbjct: 13 DISKSKWDLDTYSGRVKHYFASANPMTLFTSSNTQEMCRKIVVDYKKGIINPELTMDELW 72
Query: 348 KAKQLYESAFHPDSGELQNVFGRMSFQMPGGCLITGAMLQWYRTATAVVFWQWVNQSFNA 527
AK LY+S +HPD+GE GRMS Q P +ITG +L YRT ++F W+NQSFNA
Sbjct: 73 SAKILYDSVYHPDTGEKMFCLGRMSAQTPANMVITGMLLSCYRTCPGIIFSHWINQSFNA 132
Query: 528 LVNYTNRNANSPLTTKQMGVAYVSATSAAMTTAL 629
+VNYTNR+ N T +Q+ +Y AT AA T AL
Sbjct: 133 IVNYTNRSGNCRTTNQQLLYSYFCATGAATTAAL 166
>Z48045-8|CAI46557.1| 331|Caenorhabditis elegans Hypothetical
protein C41C4.10 protein.
Length = 331
Score = 90.6 bits (215), Expect = 1e-18
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 6/232 (2%)
Frame = +3
Query: 150 PEEKRIDITQPLWDQSTFVGRFRHFAFISNPLLSMASXXXXXXXXXXXXXXXAGREQPGT 329
P + + +P + Q TF+GR+ H + +P AS AG
Sbjct: 11 PIYPKFKLGEPRFPQDTFLGRYLHCLDVIDPRTLFASNKKLEESLELLNSFKAGTAT-NV 69
Query: 330 KLEQVIKAKQLYESAFHPDSGELQNVFGRMSFQMPGGCLITGAMLQWYRTATAVVFWQWV 509
+ + +A++L + HPD+GE RMS +P G + ML + ++FWQW+
Sbjct: 70 PDKSLWEAQKLKSAILHPDTGEKVLPPFRMSGFVPFGWITVTGMLLPNPSWPTLLFWQWM 129
Query: 510 NQSFNALVNYTNRNANSPLTTKQMGVAYVSATSAAMTTALIFKFGVQKRAKNP-----IL 674
NQS NA VNY NRNA P + AY +A +AA + + + ++K + P I+
Sbjct: 130 NQSHNACVNYANRNATQPQPLSKYIGAYGAAVTAACSISGGLTYFIKKASSLPPTTRIII 189
Query: 675 XXXXXXXXXXXXNWVNIPLMRQNEIILGLDVSD-ESGRVIGKSXIAPVKGIS 827
+ +N+ MR NE+ G+ V + ++G+V+G S +A + ++
Sbjct: 190 QRFVPLPATSLASSLNVICMRWNELETGIQVYEKDTGKVVGVSKVAAKQAVT 241
>AC024775-7|AAK68451.1| 251|Caenorhabditis elegans Hypothetical
protein Y41D4A.1 protein.
Length = 251
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 524 CSSKLHK*ECQFSPNHQTDGSGIRVCDISCHDHGPDLQVRCSEKSEESYFGSLCAVRRGG 703
C+S + EC + + T G+GI SC +G + C + ++ FGS A R GG
Sbjct: 184 CTSTNYCCECPYGQAYGTCGNGICPNGFSCQANG-NCCPSC--PNNQTPFGSCVANRCGG 240
Query: 704 GR 709
GR
Sbjct: 241 GR 242
>U40947-5|AAC48070.1| 505|Caenorhabditis elegans Inward rectifying
k (potassium)channel family protein 1 protein.
Length = 505
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 253 IDSSGLEMKAKCRNLPTNVLWSH 185
++S+G+ +AK LP+ VLW H
Sbjct: 334 VESTGMTAQAKTSYLPSEVLWGH 356
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 215 EPSHKCALVPQWLGDVYSLFFRHFIFLSYGTKMD 114
+PS C +P+WLG++ S R + + G K+D
Sbjct: 92 QPSFDC--LPEWLGEIESYANRRVLKILVGNKVD 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,708,683
Number of Sequences: 27780
Number of extensions: 434494
Number of successful extensions: 955
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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