Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_G15
         (836 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   1.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   2.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   2.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   2.0  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   3.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   3.5  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -2

Query: 235 EMKAKCRNLPTNVLWSHSGWVMSIL-FS-SGIL 143
           E  + CR++P   L   SGW +  + FS +GIL
Sbjct: 637 ETHSACRDIPEEFLRPESGWAIGAMSFSATGIL 669


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 433 GIWNDILPKTFCSSPLSGWN 374
           G+W  IL     S PL+GWN
Sbjct: 159 GVW--ILSGAISSPPLAGWN 176


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 433 GIWNDILPKTFCSSPLSGWN 374
           G+W  IL     S PL+GWN
Sbjct: 159 GVW--ILSGAISSPPLAGWN 176


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 433 GIWNDILPKTFCSSPLSGWN 374
           G+W  IL     S PL+GWN
Sbjct: 159 GVW--ILSGAISSPPLAGWN 176


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 531 VNYTNRNANSPLTTKQMGVAYVSATSA 611
           + Y N    +PL T  +GVA  SA  A
Sbjct: 574 LEYRNGEVTTPLFTPAVGVAAASAGGA 600


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 584 SGIRVCDISCHDHGPDLQVRCSEKSEE 664
           +G+ + D+S HD   DL +  +++S E
Sbjct: 336 TGLYINDLSMHDFSRDLMLAGTQQSVE 362


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,138
Number of Sequences: 438
Number of extensions: 5624
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)