Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_G10
(862 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79759-6|CAB02135.3| 452|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 31 1.1
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 31 1.1
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 31 1.1
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 31 1.1
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 31 1.1
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 31 1.1
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 31 1.1
Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical pr... 30 1.8
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 29 3.2
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 29 3.2
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 29 3.2
U39849-8|AAA81050.1| 479|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81133-4|CAI70414.2| 184|Caenorhabditis elegans Hypothetical pr... 29 5.6
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 28 7.4
U41264-6|AAA82426.1| 437|Caenorhabditis elegans Hypothetical pr... 28 7.4
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 28 7.4
U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linke... 28 7.4
U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linke... 28 7.4
U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linke... 28 7.4
AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-lin... 28 7.4
AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-lin... 28 7.4
AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-lin... 28 7.4
Z81570-5|CAB04605.2| 321|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z49128-2|CAA88959.1| 848|Caenorhabditis elegans Hypothetical pr... 28 9.8
>Z79759-6|CAB02135.3| 452|Caenorhabditis elegans Hypothetical
protein ZK858.7 protein.
Length = 452
Score = 63.3 bits (147), Expect = 2e-10
Identities = 38/164 (23%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Frame = +3
Query: 348 QKLTAAEIEDLKNDANRASDIIESLITNSNTFHNKTEFSQXXXXXXXXXXXXXXXQILKP 527
QKL + ++K +++ L+ S +F +T FSQ IL+P
Sbjct: 123 QKLEMDAVLEMKKQGVSGQEMVAKLVEGSASFQTRTVFSQSKYIKRKAKKHSDRVLILRP 182
Query: 528 NLRTIAEIMYKLEPGKVQNLRIDTLSQIITTVNIYCEGNHLLYDSGSNGLVAAALLSSIG 707
+R +A+ Y +P ++ LR D L+ I+ ++ G +++ + GL+ +A++ +G
Sbjct: 183 TIRLLAKAYYLKDPDRLAMLRADQLALILQMAGLH-HGKNVVVFEQTLGLITSAVIERLG 241
Query: 708 QNTNGRLVHMHPGNMSQK-QALLAMNFPEEXLKRCISVNVYSAL 836
G +H+H G ++Q + +MN+ + L + V + L
Sbjct: 242 --GTGACIHIHRGAVAQSIPCVHSMNYDDNTLSTFLPVRIKCVL 283
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Frame = +3
Query: 219 SKSNKKAREYTVELTDEVVNLKDEI------EIKLSGSDNRNIVDDGLSQKLTAAEIEDL 380
S K A+E + + +N +DE E KL +NR +VDD +++ A+ L
Sbjct: 971 SLEEKAAKENQIHSLQDEMNSQDETIGKINKEKKLLEENNRQLVDDLQAEEAKQAQANRL 1030
Query: 381 KNDANRASDIIESLITNSNTFHNKTEFSQ 467
+ + D +E + +TE S+
Sbjct: 1031 RGKLEQTLDEMEEAVEREKRIRAETEKSK 1059
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Frame = +3
Query: 219 SKSNKKAREYTVELTDEVVNLKDEI------EIKLSGSDNRNIVDDGLSQKLTAAEIEDL 380
S K A+E + + +N +DE E KL +NR +VDD +++ A+ L
Sbjct: 971 SLEEKAAKENQIHSLQDEMNSQDETIGKINKEKKLLEENNRQLVDDLQAEEAKQAQANRL 1030
Query: 381 KNDANRASDIIESLITNSNTFHNKTEFSQ 467
+ + D +E + +TE S+
Sbjct: 1031 RGKLEQTLDEMEEAVEREKRIRAETEKSK 1059
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Frame = +3
Query: 219 SKSNKKAREYTVELTDEVVNLKDEI------EIKLSGSDNRNIVDDGLSQKLTAAEIEDL 380
S K A+E + + +N +DE E KL +NR +VDD +++ A+ L
Sbjct: 971 SLEEKAAKENQIHSLQDEMNSQDETIGKINKEKKLLEENNRQLVDDLQAEEAKQAQANRL 1030
Query: 381 KNDANRASDIIESLITNSNTFHNKTEFSQ 467
+ + D +E + +TE S+
Sbjct: 1031 RGKLEQTLDEMEEAVEREKRIRAETEKSK 1059
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +3
Query: 252 VELTD-EVVNLKDEIEIKLSGSDNRNIVDDGLSQKLT--AAEIEDLKNDANRASDIIESL 422
+E T+ E+ LKDE+ + L + +GLS+K +I+DL + A+ ++ ++
Sbjct: 1021 LETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVHNM 1080
Query: 423 -ITNSNTFHNKTEFSQ 467
+ N N K E Q
Sbjct: 1081 RMKNVNLEEKKNELDQ 1096
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +3
Query: 252 VELTD-EVVNLKDEIEIKLSGSDNRNIVDDGLSQKLT--AAEIEDLKNDANRASDIIESL 422
+E T+ E+ LKDE+ + L + +GLS+K +I+DL + A+ ++ ++
Sbjct: 1021 LETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVHNM 1080
Query: 423 -ITNSNTFHNKTEFSQ 467
+ N N K E Q
Sbjct: 1081 RMKNVNLEEKKNELDQ 1096
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +3
Query: 252 VELTD-EVVNLKDEIEIKLSGSDNRNIVDDGLSQKLT--AAEIEDLKNDANRASDIIESL 422
+E T+ E+ LKDE+ + L + +GLS+K +I+DL + A+ ++ ++
Sbjct: 781 LETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVHNM 840
Query: 423 -ITNSNTFHNKTEFSQ 467
+ N N K E Q
Sbjct: 841 RMKNVNLEEKKNELDQ 856
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +3
Query: 252 VELTD-EVVNLKDEIEIKLSGSDNRNIVDDGLSQKLT--AAEIEDLKNDANRASDIIESL 422
+E T+ E+ LKDE+ + L + +GLS+K +I+DL + A+ ++ ++
Sbjct: 1021 LETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANKVVHNM 1080
Query: 423 -ITNSNTFHNKTEFSQ 467
+ N N K E Q
Sbjct: 1081 RMKNVNLEEKKNELDQ 1096
>Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical
protein ZC376.6 protein.
Length = 1152
Score = 30.3 bits (65), Expect = 1.8
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Frame = +3
Query: 315 DNRNIVDDGLSQKLTAAEIEDLKNDANRASDIIESLITNSNTFHNKTEFSQXXXXXXXXX 494
++R I G ++ E LK D + D I L+ + HN S
Sbjct: 125 NSRGIEGAGEPMEVEMTEEMMLKKDKDTFIDEIVDLVRDIQK-HNDASMSSQPTWIDRLS 183
Query: 495 XXXXXXQILK-----PNLRTIAEI----MYKLEPGKVQNLRIDTLSQIITTVNI 629
QIL P+L T+ EI +++ P ++NL I+T ++T VNI
Sbjct: 184 VEKISNQILMLQNYLPSLLTVEEIINALLFEHGPDVIENLIIETPENLVTIVNI 237
>Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical
protein F59A2.2 protein.
Length = 520
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Frame = +3
Query: 213 MISKSNKKAREYTVELTDEVVNLKDEIE-IKLSGSDNRNIVDDGLSQKL--TAAEIEDLK 383
++ + +K E +L DE+ LK+E E ++L S + ++ S++ ++E LK
Sbjct: 380 VLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKVQLEAKESREFDEEREDVEALK 439
Query: 384 NDANRAS---DIIESLIT-NSNTFHN 449
+ N D +ES IT NS++F N
Sbjct: 440 LELNAVKSTRDDLESRITENSSSFEN 465
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 324 NIVDDGLSQKLTAAEIEDLKNDANRASDIIES 419
N+V+DG++ +L + +E + N N +D +ES
Sbjct: 1074 NVVEDGVAVRLQSERLETILNAINDGNDAVES 1105
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 324 NIVDDGLSQKLTAAEIEDLKNDANRASDIIES 419
N+V+DG++ +L + +E + N N +D +ES
Sbjct: 1070 NVVEDGVAVRLQSERLETILNAINDGNDAVES 1101
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 324 NIVDDGLSQKLTAAEIEDLKNDANRASDIIES 419
N+V+DG++ +L + +E + N N +D +ES
Sbjct: 1070 NVVEDGVAVRLQSERLETILNAINDGNDAVES 1101
>U39849-8|AAA81050.1| 479|Caenorhabditis elegans Hypothetical
protein C06A8.5 protein.
Length = 479
Score = 29.1 bits (62), Expect = 4.3
Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Frame = +3
Query: 96 KQNFKKLHKYNKP---NSTITVGRDSINLNGIEGCRYFSTFKMISKSNKKAREYTVELTD 266
+ KL K NK S I DS + E R + ++ E EL
Sbjct: 84 RSEIDKLEKINKEFANGSVIPEHDDSNSFGESEMLRISEDCQKYKETATALYERNAELEK 143
Query: 267 EVVNLKDEIE 296
E VNLKDEIE
Sbjct: 144 EAVNLKDEIE 153
>Z81133-4|CAI70414.2| 184|Caenorhabditis elegans Hypothetical
protein T28B8.6 protein.
Length = 184
Score = 28.7 bits (61), Expect = 5.6
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = +3
Query: 57 DNMIKIGDYIV-IQKQNFKKLH-KYNKPNSTITVGRDSINLNGIEGCRY--FSTFKMISK 224
DN +K +V I K+ L+ Y + V + +NG C+ F K I+
Sbjct: 81 DNKVKYKPIVVVINKRGRSTLYLNYLYVSIAFLVAAGLLFVNGRAMCKSEAFVPVKNIND 140
Query: 225 SNKKAREYTVELT 263
SNK REY V LT
Sbjct: 141 SNKPQREYPVSLT 153
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +3
Query: 219 SKSNKKAREYTVELTD---EVVNLKDEIEIKLSGSDNRNIVDDGLSQKLTAAEIEDLKND 389
S+ + EY +T E++NL+ ++E ++S +++RN L + T E+E K
Sbjct: 574 SQLTRTLEEYRERITGKDAEILNLRKQLEKEISHTEDRN----RLLHENTQKELEAHKET 629
Query: 390 ANRASDIIESLITN-SNTFHNKTEFSQ 467
++E+ I + F N+ E+ +
Sbjct: 630 HTETVRVLEAEIDQFKSAFENEQEYGK 656
>U41264-6|AAA82426.1| 437|Caenorhabditis elegans Hypothetical
protein F10E7.10 protein.
Length = 437
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1
Query: 379 RSSISAAVSFCESPSSTMFLLSL 311
RSS SA S CES SST+F L
Sbjct: 381 RSSASATSSVCESQSSTLFFCLL 403
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 28.3 bits (60), Expect = 7.4
Identities = 29/131 (22%), Positives = 50/131 (38%), Gaps = 3/131 (2%)
Frame = +3
Query: 78 DYIVIQKQNFKKLHKYNKPNSTITVGRDSINLNGIE---GCRYFSTFKMISKSNKKAREY 248
D++ Q K+ NK TV DS + + + C + + K R Y
Sbjct: 64 DFVPSQTHTASKIPVKNKRAKKCTVESDSSSSDDSDQGDDCEFIPACDETQEVPKIKRGY 123
Query: 249 TVELTDEVVNLKDEIEIKLSGSDNRNIVDDGLSQKLTAAEIEDLKNDANRASDIIESLIT 428
T+ V N D+ DDG+ ++ + ED ND+ + ++S++
Sbjct: 124 TLRTRASVKNKCDDSW------------DDGIDEEDVSKRSEDTLNDSFVDPEFMDSVLD 171
Query: 429 NSNTFHNKTEF 461
N T K +F
Sbjct: 172 NQLTIKGKKQF 182
>U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform b protein.
Length = 713
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +3
Query: 174 NGIEGCRYFSTFKMISKSNKKAREYTVELTDEVVNLKDEIEIKLSGSDNRNIVDDGLSQK 353
+G+ R ++ +S ++ + ++ T E DE E++ + S + DD L
Sbjct: 363 DGVPSTRPAKSYGRLSLRSRYSASESITTTHE----NDEKEVEKADSLQKLFADDELGSV 418
Query: 354 LTAAEIEDLKN-DANRASDIIESLITNSNTF 443
L E E LKN D+N SD ++ S +
Sbjct: 419 LNFKE-EKLKNTDSNNDSDTTSVILQRSRKY 448
>U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform a protein.
Length = 682
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +3
Query: 174 NGIEGCRYFSTFKMISKSNKKAREYTVELTDEVVNLKDEIEIKLSGSDNRNIVDDGLSQK 353
+G+ R ++ +S ++ + ++ T E DE E++ + S + DD L
Sbjct: 332 DGVPSTRPAKSYGRLSLRSRYSASESITTTHE----NDEKEVEKADSLQKLFADDELGSV 387
Query: 354 LTAAEIEDLKN-DANRASDIIESLITNSNTF 443
L E E LKN D+N SD ++ S +
Sbjct: 388 LNFKE-EKLKNTDSNNDSDTTSVILQRSRKY 417
>U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform c protein.
Length = 622
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +3
Query: 174 NGIEGCRYFSTFKMISKSNKKAREYTVELTDEVVNLKDEIEIKLSGSDNRNIVDDGLSQK 353
+G+ R ++ +S ++ + ++ T E DE E++ + S + DD L
Sbjct: 332 DGVPSTRPAKSYGRLSLRSRYSASESITTTHE----NDEKEVEKADSLQKLFADDELGSV 387
Query: 354 LTAAEIEDLKN-DANRASDIIESLITNSNTF 443
L E E LKN D+N SD ++ S +
Sbjct: 388 LNFKE-EKLKNTDSNNDSDTTSVILQRSRKY 417
>AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1c protein.
Length = 622
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +3
Query: 174 NGIEGCRYFSTFKMISKSNKKAREYTVELTDEVVNLKDEIEIKLSGSDNRNIVDDGLSQK 353
+G+ R ++ +S ++ + ++ T E DE E++ + S + DD L
Sbjct: 332 DGVPSTRPAKSYGRLSLRSRYSASESITTTHE----NDEKEVEKADSLQKLFADDELGSV 387
Query: 354 LTAAEIEDLKN-DANRASDIIESLITNSNTF 443
L E E LKN D+N SD ++ S +
Sbjct: 388 LNFKE-EKLKNTDSNNDSDTTSVILQRSRKY 417
>AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1a protein.
Length = 713
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +3
Query: 174 NGIEGCRYFSTFKMISKSNKKAREYTVELTDEVVNLKDEIEIKLSGSDNRNIVDDGLSQK 353
+G+ R ++ +S ++ + ++ T E DE E++ + S + DD L
Sbjct: 363 DGVPSTRPAKSYGRLSLRSRYSASESITTTHE----NDEKEVEKADSLQKLFADDELGSV 418
Query: 354 LTAAEIEDLKN-DANRASDIIESLITNSNTF 443
L E E LKN D+N SD ++ S +
Sbjct: 419 LNFKE-EKLKNTDSNNDSDTTSVILQRSRKY 448
>AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1b protein.
Length = 682
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +3
Query: 174 NGIEGCRYFSTFKMISKSNKKAREYTVELTDEVVNLKDEIEIKLSGSDNRNIVDDGLSQK 353
+G+ R ++ +S ++ + ++ T E DE E++ + S + DD L
Sbjct: 332 DGVPSTRPAKSYGRLSLRSRYSASESITTTHE----NDEKEVEKADSLQKLFADDELGSV 387
Query: 354 LTAAEIEDLKN-DANRASDIIESLITNSNTF 443
L E E LKN D+N SD ++ S +
Sbjct: 388 LNFKE-EKLKNTDSNNDSDTTSVILQRSRKY 417
>Z81570-5|CAB04605.2| 321|Caenorhabditis elegans Hypothetical
protein K12G11.5 protein.
Length = 321
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/73 (21%), Positives = 37/73 (50%)
Frame = -2
Query: 651 INDFPHNKYSQL**SVTKCLFLNFELYQVLIYT*FLLSFLG*VLIFVNIQNISFLSSLNT 472
IN + +N++ + S+ + + + F + + +F+ +L ++NIS + L T
Sbjct: 97 INFYMYNEFQSIYISINRFIAIYFPHHYNKLCGYTATAFISTLLYADRLRNISIETYLRT 156
Query: 471 SPEKTLFYCERYL 433
S ++ + Y +YL
Sbjct: 157 SKQQFIIYSSQYL 169
>Z49128-2|CAA88959.1| 848|Caenorhabditis elegans Hypothetical
protein M03C11.2 protein.
Length = 848
Score = 27.9 bits (59), Expect = 9.8
Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = +3
Query: 126 NKPNSTITVGRDSINLNGIEGCRYFSTFKMISKSNKKAREYTVELTDEV-----VNLKDE 290
NK ST+ V + NG C YF+T K + + Y V L D + LKD
Sbjct: 290 NKLKSTLEVSKQGKLSNG---CPYFATRKSVPQCQLVLLPYQVLLHDGTRKAWGIELKDN 346
Query: 291 IEIKLSGSDNRNIVDDGLSQKLTAAEIEDLKNDANRASDIIESLIT 428
+ + + N + +KL KN + +++I +T
Sbjct: 347 VIVLDEAHNVLNTISSFFFRKLEKVSKNGFKNCSLYSAEISTKSLT 392
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,238,428
Number of Sequences: 27780
Number of extensions: 305376
Number of successful extensions: 747
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -