Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_G08
         (922 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    26   0.48 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    24   1.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   4.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.4  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   4.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   4.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   4.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.9  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 25.8 bits (54), Expect = 0.48
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -2

Query: 198 LMLENSVSITEKSPSLMGIFLLRPLSAIFHVICRVEIVETKQTLKRSRVNTFHWNNTHS 22
           L++ N VSIT++ P+     +    S  F  +  ++   T   +  S++N+FHW+ T S
Sbjct: 194 LLMPNDVSITDE-PAYQYRGIALDTSRNFVTVDVIK--RTLDGMAASKLNSFHWHITDS 249


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 720 ICCLSGLVANDETAQCFW 667
           I C +GLV ND+   C W
Sbjct: 136 ITCPNGLVYNDKAGICSW 153


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 579 PLSLRCPGTVCLPWKRHCHNSPSRTGTFLSRSTERSHHS 695
           PL+    G    PWK+    +PS + T  S  T+R+  S
Sbjct: 54  PLADAAVGKGFHPWKKSPQGAPSPSSTPSSLPTQRTSTS 92


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = -1

Query: 640 ELWQWRFHGKHTVPG--QRRLNG--LRICSLGQQKLPVVFSVHRFRI 512
           EL+Q +  G   V     R L G  L   +  ++ L V+F++H+FRI
Sbjct: 615 ELYQIQEDGSRGVIAFASRSLRGPELNYTTTEKELLGVIFALHKFRI 661


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 468  STTNYWSTPNTRRNLIRNLCTENTT 542
            +T+ +W+T  TRR       T +TT
Sbjct: 1047 TTSPWWTTTTTRRTTTTRPTTTSTT 1071



 Score = 21.8 bits (44), Expect = 7.7
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 468  STTNYWSTPNTRRNLIRNLCT 530
            STTN+W T  T     R   T
Sbjct: 1178 STTNHWQTKTTTSTTTRPTTT 1198


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 54  RENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 161
           R+ + +F+  +Q    K   K  TVV+RE+  +S+A
Sbjct: 331 RKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 54  RENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 161
           R+ + +F+  +Q    K   K  TVV+RE+  +S+A
Sbjct: 331 RKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 54  RENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 161
           R+ + +F+  +Q    K   K  TVV+RE+  +S+A
Sbjct: 331 RKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 539 NREFLLPKGTNPEAIKSSLSRDGVLT 616
           N + L PKG N   I+  +  +GVL+
Sbjct: 833 NNKRLEPKGDNRYTIREEILANGVLS 858


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,554
Number of Sequences: 336
Number of extensions: 4165
Number of successful extensions: 35
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25754817
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)