Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_G07
(815 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16NB2 Cluster: Putative uncharacterized protein; n=2; ... 89 1e-16
UniRef50_UPI0000D56792 Cluster: PREDICTED: similar to CCR4-NOT t... 77 7e-13
UniRef50_Q94547 Cluster: Regulator of gene activity; n=3; Sophop... 77 7e-13
UniRef50_Q5TT44 Cluster: ENSANGP00000026958; n=2; Culicidae|Rep:... 64 3e-09
UniRef50_A7F842 Cluster: Predicted protein; n=1; Sclerotinia scl... 36 0.92
UniRef50_Q4TC75 Cluster: Chromosome undetermined SCAF7048, whole... 36 1.6
UniRef50_Q9NZN8 Cluster: CCR4-NOT transcription complex subunit ... 36 1.6
UniRef50_Q1MNU4 Cluster: Putative uncharacterized protein LIC037... 34 4.9
UniRef50_A2RB58 Cluster: Contig An18c0170, complete genome; n=2;... 33 6.5
>UniRef50_Q16NB2 Cluster: Putative uncharacterized protein; n=2;
Endopterygota|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 513
Score = 89.0 bits (211), Expect = 1e-16
Identities = 61/134 (45%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Frame = +3
Query: 444 GALSPGRNSTAMPGGAPPSMASRATLFG-QRAFADRRVTMP----TTLSQAXXXXXXXXX 608
G+ + ++ A +R+ LFG QR FADRR MP TT+S
Sbjct: 93 GSQQQSQQLSSTNSSASSGANARSNLFGGQRGFADRRA-MPGLSGTTMSNMVSFMQSRGY 151
Query: 609 XXXRFNAGNNYHSVFGEG-GDTSTPPLLDLSEFPSLT-ARGA-GDQXXXXXXXXX--GSK 773
N+ NN+HSVF G +T TPPLLDLSEFPSLT ARG DQ GSK
Sbjct: 152 GSQSGNSINNFHSVFDNGTAETGTPPLLDLSEFPSLTNARGGQNDQSLPQSNALQPPGSK 211
Query: 774 PYVGMVKXPTSEQS 815
PYVGMVK PTSEQ+
Sbjct: 212 PYVGMVKQPTSEQT 225
>UniRef50_UPI0000D56792 Cluster: PREDICTED: similar to CCR4-NOT
transcription complex, subunit 2 isoform b; n=2;
Endopterygota|Rep: PREDICTED: similar to CCR4-NOT
transcription complex, subunit 2 isoform b - Tribolium
castaneum
Length = 483
Score = 76.6 bits (180), Expect = 7e-13
Identities = 58/130 (44%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Frame = +3
Query: 429 TPTFGGALSPGRNSTAMPGGAPPSMASRAT-LFGQRAFADRRVTMPTTLSQAXXXXXXXX 605
T GG+ S GR+S + SM+ T +FGQRA +DRR +P + +
Sbjct: 7 TRNIGGS-SLGRSSVSFGSN---SMSGHVTPVFGQRAPSDRR-GIPAMGNSSQMGNMNSL 61
Query: 606 XXXXRFNAGNNYHSVFGEGGDTSTPPLLDLSEFPSLTARGAGDQXXXXXXXXXGSKPYVG 785
FN SVFG G DT+TP LLDLSEFPSLT R +GD G+KPYVG
Sbjct: 62 GGYSSFN------SVFGSG-DTNTPSLLDLSEFPSLTNRSSGDN-VPQPSPMPGAKPYVG 113
Query: 786 MVKXPTSEQS 815
MVK PTSE S
Sbjct: 114 MVKQPTSEAS 123
>UniRef50_Q94547 Cluster: Regulator of gene activity; n=3;
Sophophora|Rep: Regulator of gene activity - Drosophila
melanogaster (Fruit fly)
Length = 585
Score = 76.6 bits (180), Expect = 7e-13
Identities = 61/141 (43%), Positives = 67/141 (47%), Gaps = 19/141 (13%)
Frame = +3
Query: 450 LSPGRNSTAMPGGAPPSMASR-ATLFGQRAFADRRVTMPTTLSQAXXXXXXXXXXXXRFN 626
LSP RN+ GG S +R A LFGQR F +RR +
Sbjct: 72 LSPNRNAQLSVGGPAISSGNRNANLFGQRQFVERRAMQGLGSGPMSNMGNFMQTGRGGYG 131
Query: 627 AG-------NNYHSVFGEGG--DTSTPPLLDLSEFPSLT-ARGAGDQXXXXXXXXX--GS 770
G NN+H VFG GG DTSTP LLD +EFPSLT ARG DQ GS
Sbjct: 132 TGGGGGGPLNNFH-VFGGGGGSDTSTPALLDPTEFPSLTNARGQNDQTLPQSNPLQPPGS 190
Query: 771 KPY------VGMVKXPTSEQS 815
KPY GMVK PTSEQS
Sbjct: 191 KPYGNFFTSFGMVKQPTSEQS 211
>UniRef50_Q5TT44 Cluster: ENSANGP00000026958; n=2; Culicidae|Rep:
ENSANGP00000026958 - Anopheles gambiae str. PEST
Length = 537
Score = 64.5 bits (150), Expect = 3e-09
Identities = 42/74 (56%), Positives = 44/74 (59%), Gaps = 11/74 (14%)
Frame = +3
Query: 624 NAGNNYHSVF-GEGGDTSTPPLLDLSEFPSLT-ARGA-GDQXXXXXXXXX--GSKPY--- 779
N+ NNYH VF G +T TPPLLDLSEFPSLT ARG DQ GSKPY
Sbjct: 140 NSINNYHGVFDGSAAETGTPPLLDLSEFPSLTNARGGQNDQSLPQSNALQPPGSKPYGKS 199
Query: 780 ---VGMVKXPTSEQ 812
GMVK PTSEQ
Sbjct: 200 VAHFGMVKQPTSEQ 213
>UniRef50_A7F842 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 598
Score = 36.3 bits (80), Expect = 0.92
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 34 CGVQRNRMKILKHLSVT*RCIKFTVFYSSVLRENSFMYHLYW 159
CG+ N M+I++HL++ + I+F ++L F+ +YW
Sbjct: 346 CGIHSNLMEIMQHLAIFYQSIQFAASSRNLLEPRDFLNDIYW 387
>UniRef50_Q4TC75 Cluster: Chromosome undetermined SCAF7048, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7048,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 560
Score = 35.5 bits (78), Expect = 1.6
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 687 LDLSEFPSLTARGAGDQXXXXXXX---XXGSKPYVGMVKXPTSEQS 815
LDLS+FP+L R D G PYVGMV P+ EQS
Sbjct: 273 LDLSDFPALADRSRRDAASNPAPLPNPLAGRAPYVGMVTKPSGEQS 318
>UniRef50_Q9NZN8 Cluster: CCR4-NOT transcription complex subunit 2;
n=58; Eumetazoa|Rep: CCR4-NOT transcription complex
subunit 2 - Homo sapiens (Human)
Length = 540
Score = 35.5 bits (78), Expect = 1.6
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = +3
Query: 621 FNAGNNYHSVFGEGGDTSTPPL-LDLSEFPSLTAR----GAGDQXXXXXXXXXGSKPYVG 785
F N+ S G D S LDLS+FP+L R G+G+ G PYVG
Sbjct: 202 FGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLA-GRAPYVG 260
Query: 786 MVKXPTSEQS 815
MV P +EQS
Sbjct: 261 MVTKPANEQS 270
>UniRef50_Q1MNU4 Cluster: Putative uncharacterized protein LIC037;
n=1; Lawsonia intracellularis PHE/MN1-00|Rep: Putative
uncharacterized protein LIC037 - Lawsonia
intracellularis (strain PHE/MN1-00)
Length = 1607
Score = 33.9 bits (74), Expect = 4.9
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +1
Query: 646 QFLVKVVIHQHHHFWT*ANFHH*QQEARVTKHPLQHHHLRALNPML 783
QF IH HHH +HH QQ+ HPL HHH + P+L
Sbjct: 403 QFQHYKYIHHHHHSHHQHRYHHQQQQHH--HHPL-HHHYKIGIPLL 445
>UniRef50_A2RB58 Cluster: Contig An18c0170, complete genome; n=2;
Aspergillus|Rep: Contig An18c0170, complete genome -
Aspergillus niger
Length = 658
Score = 33.5 bits (73), Expect = 6.5
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 436 LLGAPCRLAV-IQLQCQAELPHQWHLELRCLVNELLQTEGLQCQQLYLKLILIQC 597
LL A C + ++++ +++P H EL+ +N ++Q + L C + L+++ C
Sbjct: 209 LLNAICTIGSRVEIRSGSQIPDLLHAELKRSINVVIQNKNLNCLESVQALLIVAC 263
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 741,811,571
Number of Sequences: 1657284
Number of extensions: 13698389
Number of successful extensions: 34887
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 32987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34789
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70789333940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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