Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_G07
         (815 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    24   1.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   1.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    24   1.3  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.9  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   6.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   6.7  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.9  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = +3

Query: 81  DVKMY--QVYSVL*QRFTRKQFYVPFILVFKILNAQKTSKLDSQQILFITSKRKYLSWQS 254
           D  +Y   +Y+VL    T+K  +   +   K++      +  S   LF+ S   + S+QS
Sbjct: 72  DATLYVQNIYTVL-TALTKKPLWFKLLKNLKMVQNHNNIREKSHYCLFVASNCFFWSYQS 130

Query: 255 IRDY 266
              Y
Sbjct: 131 YMSY 134


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +3

Query: 18  CLFRVM--WRSAKSYENFKTFISDV 86
           C++ +   W   +SY NF  F+ D+
Sbjct: 56  CIWSIFNKWNQFRSYSNFSVFLFDI 80


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = +3

Query: 81  DVKMY--QVYSVL*QRFTRKQFYVPFILVFKILNAQKTSKLDSQQILFITSKRKYLSWQS 254
           D  +Y   +Y+VL    T+K  +   +   K++      +  S   LF+ S   + S+QS
Sbjct: 72  DATLYVQNIYTVL-TALTKKPLWFKLLKNLKMVQNHNNIREKSHYCLFVASNCFFWSYQS 130

Query: 255 IRDY 266
              Y
Sbjct: 131 YMSY 134


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 137 LFSRKTLL*NTVNLIHLYVTDKCFKIFIR 51
           LF  + L     NL+++Y  D  F +F+R
Sbjct: 144 LFFAQGLTSPIFNLVYVYCCDNNFNVFLR 172


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 538 KAR*PNNVALDAIDGGAPP 482
           K + P ++ +D  DGG PP
Sbjct: 24  KGKMPIDLVIDERDGGKPP 42


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 538 KAR*PNNVALDAIDGGAPP 482
           K + P ++ +D  DGG PP
Sbjct: 180 KGKMPIDLVIDERDGGKPP 198


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 574 LKLILIQCRV*VICHGSTLATTTIQF 651
           LK  L Q R   + HG T+  TT+ F
Sbjct: 164 LKAQLWQNRYETVAHGMTVQKTTLFF 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,159
Number of Sequences: 336
Number of extensions: 3757
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)