Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_G07
         (815 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   2.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.9  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   8.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   8.5  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +1

Query: 88  RCIKFTVFYSSVLRENSFMYHLYWCL 165
           R + F + ++S+ R+ SF+ +LY+ L
Sbjct: 799 RTLGFILRFTSIFRDQSFLRNLYYAL 824


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 493 GAPPGIAVELRPGDKAPPKVG 431
           G PPG  +   PG+  PP+ G
Sbjct: 184 GMPPGPQMMRPPGNVGPPRTG 204


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +2

Query: 206 TNLVYYIEAEIFILAEYTRL*TILILYKIVEQGLIIGYGKLEFSTSASK 352
           T+++YYIE  +    ++    +++IL       LI+G    EFS   +K
Sbjct: 341 TDMLYYIEDAMGSSWQWVYFISMVILGAFFVMNLILGVLSGEFSKERTK 389


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +1

Query: 439  LGAPCRLAVIQLQCQAELPHQWHLELRCLVNELLQTEGLQCQQL 570
            + A  R A +  +   ++ HQW   L   +NE++  + L  +Q+
Sbjct: 1158 MAAGTRRAHVLQRSAGKMFHQWGEALGARLNEMVNNDKLTSEQM 1201


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,917
Number of Sequences: 2352
Number of extensions: 15423
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)