Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_G03
(880 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p pro... 111 1e-24
AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA ... 111 1e-24
DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosom... 110 2e-24
AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal pr... 105 1e-22
BT025057-1|ABE73228.1| 481|Drosophila melanogaster IP15830p pro... 31 2.8
BT004882-1|AAO45238.1| 481|Drosophila melanogaster GH13361p pro... 31 2.8
BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p pro... 31 2.8
AE014298-2818|AAF48935.1| 481|Drosophila melanogaster CG7874-PA... 31 2.8
AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA... 31 2.8
AE013599-929|AAF58897.1| 1127|Drosophila melanogaster CG1625-PA ... 30 4.8
>BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p
protein.
Length = 269
Score = 111 bits (267), Expect = 1e-24
Identities = 50/71 (70%), Positives = 58/71 (81%)
Frame = +2
Query: 668 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPXRNRMDAYNIIKFP 847
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 848 LTSEAAMXKIE 880
LT+EAAM KIE
Sbjct: 194 LTTEAAMKKIE 204
>AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA
protein.
Length = 277
Score = 111 bits (267), Expect = 1e-24
Identities = 50/71 (70%), Positives = 58/71 (81%)
Frame = +2
Query: 668 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPXRNRMDAYNIIKFP 847
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 848 LTSEAAMXKIE 880
LT+EAAM KIE
Sbjct: 202 LTTEAAMKKIE 212
>DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosomal
protein naturalvariant protein.
Length = 277
Score = 110 bits (265), Expect = 2e-24
Identities = 50/71 (70%), Positives = 58/71 (81%)
Frame = +2
Query: 668 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPXRNRMDAYNIIKFP 847
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 848 LTSEAAMXKIE 880
LT+EAAM KIE
Sbjct: 202 LTTEAAMKKIE 212
>AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal
protein L23a protein.
Length = 269
Score = 105 bits (251), Expect = 1e-22
Identities = 49/71 (69%), Positives = 57/71 (80%)
Frame = +2
Query: 668 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPXRNRMDAYNIIKFP 847
A K Q+K++K G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 848 LTSEAAMXKIE 880
LT+EAAM KIE
Sbjct: 194 LTTEAAMKKIE 204
>BT025057-1|ABE73228.1| 481|Drosophila melanogaster IP15830p
protein.
Length = 481
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 175 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 279
T + T + PE S + PE S + PE + + PE S
Sbjct: 155 TSAPEETTSAPEESSSAPEESSSAPEETTSAPEES 189
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 175 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 279
T + + + PE S + PE + + PE S + PE S
Sbjct: 162 TSAPEESSSAPEESSSAPEETTSAPEESSSAPEES 196
Score = 29.5 bits (63), Expect = 6.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 175 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 279
T + T + PE + + PE S + PE S + PE +
Sbjct: 148 TSAPEETTSAPEETTSAPEESSSAPEESSSAPEET 182
Score = 29.5 bits (63), Expect = 6.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 187 QNTGTCPESSCACPEISCACPETSCACPESS 279
+ T + PE S + PE S + PE + + PE S
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEES 210
>BT004882-1|AAO45238.1| 481|Drosophila melanogaster GH13361p
protein.
Length = 481
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 175 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 279
T + T + PE S + PE S + PE + + PE S
Sbjct: 155 TSAPEETTSAPEESSSAPEESSSAPEETTSAPEES 189
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 175 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 279
T + + + PE S + PE + + PE S + PE S
Sbjct: 162 TSAPEESSSAPEESSSAPEETTSAPEESSSAPEES 196
Score = 29.5 bits (63), Expect = 6.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 175 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 279
T + T + PE + + PE S + PE S + PE +
Sbjct: 148 TSAPEETTSAPEETTSAPEESSSAPEESSSAPEET 182
Score = 29.5 bits (63), Expect = 6.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 187 QNTGTCPESSCACPEISCACPETSCACPESS 279
+ T + PE S + PE S + PE + + PE S
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEES 210
>BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p
protein.
Length = 985
Score = 30.7 bits (66), Expect = 2.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 706 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 614
M+ Y+ P LK +NR H+F L+L + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
>AE014298-2818|AAF48935.1| 481|Drosophila melanogaster CG7874-PA
protein.
Length = 481
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 175 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 279
T + T + PE S + PE S + PE + + PE S
Sbjct: 155 TSAPEETTSAPEESSSAPEESSSAPEETTSAPEES 189
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 175 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 279
T + + + PE S + PE + + PE S + PE S
Sbjct: 162 TSAPEESSSAPEESSSAPEETTSAPEESSSAPEES 196
Score = 29.5 bits (63), Expect = 6.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 175 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 279
T + T + PE + + PE S + PE S + PE +
Sbjct: 148 TSAPEETTSAPEETTSAPEESSSAPEESSSAPEET 182
Score = 29.5 bits (63), Expect = 6.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 187 QNTGTCPESSCACPEISCACPETSCACPESS 279
+ T + PE S + PE S + PE + + PE S
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEES 210
>AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA
protein.
Length = 985
Score = 30.7 bits (66), Expect = 2.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 706 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 614
M+ Y+ P LK +NR H+F L+L + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
>AE013599-929|AAF58897.1| 1127|Drosophila melanogaster CG1625-PA
protein.
Length = 1127
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 175 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 279
TC ++++ T + + ++ CAC SC ESS
Sbjct: 247 TCSTRSSSTTSTNEASASDVKCACDAPSCRFMESS 281
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,045,887
Number of Sequences: 53049
Number of extensions: 353629
Number of successful extensions: 1340
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -