Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_G01
         (874 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    25   0.78 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    25   1.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.8  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   2.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   2.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   5.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   7.2  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   9.6  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 489 YRPGCAAIESVSSFLDG 439
           Y PGCA ++S S+ L G
Sbjct: 382 YLPGCAMVDSCSNILTG 398


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
 Frame = -3

Query: 467 LKVSRAFWTASAADIV--FC--LDVVRFPTVILNFEIPCLIFIVATP 339
           LK + A   A+AA+ V  FC  LD     ++I+N  +PC+  +VA P
Sbjct: 293 LKDTEAEVRAAAANKVKDFCQNLDKAHQESIIMNNILPCVKELVADP 339


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -1

Query: 589 FCFVSDPCVGPPP*RFGFP 533
           FC   DP   PPP   G P
Sbjct: 127 FCHNGDPLSQPPPAHMGIP 145


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -1

Query: 589 FCFVSDPCVGPPP*RFGFP 533
           FC   DP   PPP   G P
Sbjct: 19  FCHNGDPLSQPPPAHMGIP 37


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 363 FNIYCCHTLRN*KVFSKK 310
           +NIY C T+ N + F +K
Sbjct: 195 YNIYVCQTVSNFEYFQRK 212


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 363 FNIYCCHTLRN*KVFSKK 310
           +NIY C T+ N + F +K
Sbjct: 121 YNIYVCQTVSNFEYFQRK 138


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 441 GLSS*HRLLFGCCKIPDCHLEF 376
           G+++ H   FG    PDC +EF
Sbjct: 346 GMAAPHHQNFGPRHPPDCSMEF 367


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 304  LLFFGKNFLI 333
            LLFFG NFLI
Sbjct: 1327 LLFFGLNFLI 1336


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 514 NLLRMYEENQNVMVEALHKDLRRSKMEAILLE 609
           + L  +   QN+   ++H D  +S+ E  LL+
Sbjct: 423 DFLATFLSEQNIQSTSIHGDRYQSEREKALLD 454


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,923
Number of Sequences: 336
Number of extensions: 4249
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)