Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_G01
(874 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 100 1e-21
04_04_0660 - 27017692-27017928,27018101-27018250,27018337-270184... 79 6e-15
12_01_0497 + 3946179-3946322,3947274-3947342,3948733-3948829,395... 69 4e-12
02_05_0128 - 26059348-26059437,26059553-26059759 68 1e-11
02_05_0131 + 26098459-26098668,26098788-26098863,26101972-261021... 55 3e-11
07_03_1752 - 29218348-29218524,29218593-29218736,29218957-292191... 62 7e-10
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 43 3e-04
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 43 4e-04
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 40 0.002
05_06_0214 - 26425100-26425922,26426008-26426058,26426183-264262... 40 0.003
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 40 0.003
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 38 0.008
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 38 0.008
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 37 0.018
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 35 0.074
02_05_0127 - 26053055-26053306,26055415-26055564,26055657-260557... 31 0.91
07_03_1567 - 27772815-27773302,27773471-27773561,27773641-277739... 31 1.2
08_02_0591 - 19051748-19051807,19053044-19053133,19053238-190533... 29 3.7
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 29 3.7
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 29 4.9
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 29 6.4
09_06_0240 + 21797458-21799369,21799636-21799784 28 8.5
09_04_0272 - 16278136-16278289,16278873-16278970,16279090-162792... 28 8.5
07_03_0204 - 15150854-15151147,15152230-15153689,15154055-151542... 28 8.5
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 100 bits (240), Expect = 1e-21
Identities = 57/147 (38%), Positives = 75/147 (51%), Gaps = 12/147 (8%)
Frame = +1
Query: 433 AEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLEV 612
A V + R +F G TR EWR QL+ ++RM EE + + +ALH DL + +ME+ L E+
Sbjct: 7 AAVVGELRGSFRSGRTRAAEWRAAQLRGIVRMVEEREGDISDALHSDLAKPRMESYLHEI 66
Query: 613 DYLINDLRNTLHYLDEWTKPE------------HPPKGFVNILDEVVIYNDPYGVVLVIG 756
L L W KPE P I ++P GVVLVI
Sbjct: 67 SLAKAACTFALKGLKNWMKPEKMLIMLTLINDDQVPAALTTFPSTAQIVSEPLGVVLVIS 126
Query: 757 AWNYPLQLLLLPMAGAIAAGNTVIVKP 837
AWNYP L + P+ GAIAAGN V++KP
Sbjct: 127 AWNYPFLLSIDPVIGAIAAGNAVVLKP 153
>04_04_0660 -
27017692-27017928,27018101-27018250,27018337-27018427,
27018512-27018672,27018783-27019015,27019119-27019325,
27021411-27021507,27021636-27021677,27021802-27022056
Length = 490
Score = 78.6 bits (185), Expect = 6e-15
Identities = 45/132 (34%), Positives = 64/132 (48%)
Frame = +1
Query: 442 VQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLEVDYL 621
V + R + G TR +EWR+ QL+ LLR+ E + AL +DL + + EA E+ L
Sbjct: 30 VAELRAAYESGRTRSLEWRQSQLRGLLRLLAEEEAAAFRALREDLGKHQAEAYRDEIGVL 89
Query: 622 INDLRNTLHYLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLVIGAWNYPLQLLLLPMAG 801
+ L + W + + P GV+LV WN PL L L P+ G
Sbjct: 90 VKSANAALR--EVWVP-------LIAFPARAQLEPQPLGVILVFSCWNVPLGLSLEPLVG 140
Query: 802 AIAAGNTVIVKP 837
A+AAGN V +KP
Sbjct: 141 ALAAGNAVALKP 152
>12_01_0497 +
3946179-3946322,3947274-3947342,3948733-3948829,
3951827-3952033,3952149-3952264,3953189-3953293,
3953380-3953552,3953647-3953737,3953869-3954018,
3954482-3954724
Length = 464
Score = 69.3 bits (162), Expect = 4e-12
Identities = 47/132 (35%), Positives = 62/132 (46%)
Frame = +1
Query: 442 VQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLEVDYL 621
V R F G TR EWR QL+ +LRM E EA E+ +
Sbjct: 13 VAALRGRFAAGGTRGAEWRAAQLRGILRMAAE-----AEA---------------EIALV 52
Query: 622 INDLRNTLHYLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLVIGAWNYPLQLLLLPMAG 801
+ + L L +W KP+ + + +P GVVLVI AWNYP L + P+ G
Sbjct: 53 KSSCKFALKNLKKWMKPQKVTAPLMTFPSTARVAAEPLGVVLVISAWNYPFLLSIDPIIG 112
Query: 802 AIAAGNTVIVKP 837
AIAAGN V++KP
Sbjct: 113 AIAAGNAVVLKP 124
>02_05_0128 - 26059348-26059437,26059553-26059759
Length = 98
Score = 67.7 bits (158), Expect = 1e-11
Identities = 30/78 (38%), Positives = 46/78 (58%)
Frame = +1
Query: 442 VQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLEVDYL 621
V R+ + G T+ +EWR+ QL L+RM E ++ + +ALH DL + ++E+ EV L
Sbjct: 14 VAGVREEYESGRTKELEWRKAQLGGLIRMITEEEDAIFDALHDDLGKHRVESFRDEVGVL 73
Query: 622 INDLRNTLHYLDEWTKPE 675
+RNTL L +W PE
Sbjct: 74 AKSVRNTLQNLKKWASPE 91
>02_05_0131 +
26098459-26098668,26098788-26098863,26101972-26102178,
26102311-26102435,26102740-26102900,26102977-26103067,
26103161-26103310,26103396-26103632
Length = 418
Score = 54.8 bits (126), Expect(2) = 3e-11
Identities = 24/78 (30%), Positives = 42/78 (53%)
Frame = +1
Query: 442 VQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLEVDYL 621
V R+ + G T+ +EWR+ QLK L+R+ + + + LH DL + + E+ E+ L
Sbjct: 15 VSGLREVYESGRTKDLEWRQSQLKALIRLLTDKEEEIFAVLHDDLGKHRGESFRDELGIL 74
Query: 622 INDLRNTLHYLDEWTKPE 675
+ ++ TL L +W E
Sbjct: 75 VKSIKYTLQNLKKWAASE 92
Score = 31.5 bits (68), Expect(2) = 3e-11
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 778 LLLLPMAGAIAAGNTVIVKP 837
L L P++GAIAAGN V++KP
Sbjct: 97 LALEPLSGAIAAGNAVVLKP 116
>07_03_1752 -
29218348-29218524,29218593-29218736,29218957-29219148,
29219225-29219440,29219873-29220010,29220137-29220232,
29221204-29221357,29221976-29222098,29222291-29222418,
29222669-29222773,29223396-29223437,29223631-29223746,
29223805-29223916
Length = 580
Score = 61.7 bits (143), Expect = 7e-10
Identities = 38/133 (28%), Positives = 65/133 (48%)
Frame = +1
Query: 436 EAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLEVD 615
E V +AR + RRQ L+ LL+ E+Q+++ E +D ++ ++A L E+
Sbjct: 128 EHVAQARKAQKIWAKSSFKQRRQFLRILLKYILEHQDLICEISSRDTGKTMVDASLGEIM 187
Query: 616 YLINDLRNTLHYLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLVIGAWNYPLQLLLLPM 795
+ L ++W KPE+ G + + + P GV+ I +WNYP + PM
Sbjct: 188 TTCEKITWLLDEGEKWLKPEYRSCGRSMLHKKAKVEFYPLGVIGAIVSWNYPFHNVFNPM 247
Query: 796 AGAIAAGNTVIVK 834
AI +GN ++K
Sbjct: 248 LAAIFSGNAAVIK 260
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +1
Query: 709 EVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPXRTISRLLELCC 873
E + +P GVV +I WNYPL + +A A+AAG T ++KP S L L C
Sbjct: 146 ESYVLKEPIGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKP----SELASLTC 196
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 42.7 bits (96), Expect = 4e-04
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +1
Query: 727 DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKP 837
+P GVV VI WN+P + L ++ A+AAG T++VKP
Sbjct: 163 EPIGVVGVIIPWNFPTMMFFLKVSPALAAGCTIVVKP 199
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 712 VVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKP 837
+++ P GVV + WN+PL ++ + A+A G TV+VKP
Sbjct: 211 LLVLKQPVGVVGAVTPWNFPLAMITRKVGPALACGCTVVVKP 252
>05_06_0214 -
26425100-26425922,26426008-26426058,26426183-26426256,
26426344-26426441,26426547-26426671,26426724-26426957,
26426992-26427037,26427101-26427152,26427331-26427367,
26427521-26427637,26428287-26428352,26428439-26428518,
26429102-26429311,26429650-26429739,26430093-26430182,
26430280-26430411,26430876-26431094,26431203-26431286,
26431543-26431656,26431857-26431914,26432535-26432602,
26432847-26432962,26433495-26433574,26433839-26433912
Length = 1045
Score = 39.9 bits (89), Expect = 0.003
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +1
Query: 721 YNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPXRTISRLLE 864
Y PYG V +I +N+PL++ LL + GA+ GN ++K +S +++
Sbjct: 192 YRWPYGPVAIITPFNFPLEIPLLQLMGALYMGNKPVLKVDSKVSIVMD 239
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 39.5 bits (88), Expect = 0.003
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 3/135 (2%)
Frame = +1
Query: 439 AVQKARDTFNRGTTRPIEWRRQQLKNLLRMYE--ENQNVMVEALHK-DLRRSKMEAILLE 609
AV AR F+ G P ++ + LLR + E N + AL D + +A +E
Sbjct: 111 AVHAARKAFDEGPW-PKMTAYERSRILLRFADLIEKHNDEIAALETWDNGKPYAQAANIE 169
Query: 610 VDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLVIGAWNYPLQLLLL 789
V + +R Y W H + V + ++P GV I WN+PL +
Sbjct: 170 VPMVARLMR----YYAGWADKIHGLVVPADGPHHVQVLHEPIGVAGQIIPWNFPLLMFAW 225
Query: 790 PMAGAIAAGNTVIVK 834
+ A+A GNTV++K
Sbjct: 226 KVGPALACGNTVVLK 240
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 38.3 bits (85), Expect = 0.008
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 730 PYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKP 837
P GVVL I +NYP+ L + + A+ AGN +++KP
Sbjct: 161 PLGVVLAIPPFNYPVNLAVSKIGPALIAGNALVLKP 196
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 38.3 bits (85), Expect = 0.008
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +1
Query: 727 DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKP 837
+P GVV I WNYP + + A+AAG T++VKP
Sbjct: 155 EPVGVVGHIVPWNYPTTMFFFKASPALAAGCTMVVKP 191
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 37.1 bits (82), Expect = 0.018
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1
Query: 727 DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKP 837
+P GV +I WN+P + ++ A+AAG TV+VKP
Sbjct: 182 EPLGVAGLIVPWNFPAIMFFSKVSPALAAGCTVVVKP 218
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 35.1 bits (77), Expect = 0.074
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 712 VVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVK 834
V + ++P GV I WN+PL + + A+A GN V++K
Sbjct: 204 VQVLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNAVVLK 244
>02_05_0127 -
26053055-26053306,26055415-26055564,26055657-26055747,
26055835-26055995,26056455-26056579,26056680-26056886,
26056936-26056996
Length = 348
Score = 31.5 bits (68), Expect = 0.91
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 778 LLLLPMAGAIAAGNTVIVKP 837
L L P++GAIAAGN V++KP
Sbjct: 22 LALEPLSGAIAAGNAVVLKP 41
>07_03_1567 - 27772815-27773302,27773471-27773561,27773641-27773988,
27774929-27775110,27775191-27775368,27775453-27775605,
27775993-27776232,27776369-27776449,27776485-27776730,
27777151-27777240,27777536-27777778,27778365-27778529,
27779017-27779080,27779162-27779286,27779383-27779476,
27779647-27779714,27779798-27779989,27780618-27780752,
27780847-27780934,27781014-27781107,27781484-27781547,
27781657-27781708,27781911-27782014,27782099-27782158,
27782687-27782770,27782892-27783125,27783442-27783864,
27784675-27784736,27784867-27785521
Length = 1700
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 462 FQSRHNQADRMAPSAAQESVKNV*GKPKRHGGGPTQGSETKQN-GSHSTRSRLLDQ*FEE 638
F R D A + Q+ N+ GK + GGP Q + + N G+ S R R D +E
Sbjct: 1375 FLPRAPNLDNRASALLQKEFANLRGKSSKAKGGPRQAIDNESNGGARSLRGRQKDTKIKE 1434
>08_02_0591 -
19051748-19051807,19053044-19053133,19053238-19053363,
19053920-19054104,19054644-19054818,19057111-19057191,
19057242-19057265,19057581-19057753,19057847-19058123,
19059093-19059149,19059604-19059699
Length = 447
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 487 IEWRRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWT 666
+E R L+ ++Q M + + LR+ E +LLE Y++ND N L++ +
Sbjct: 346 VENERDILRTQAESSGKSQMAMEKMVEGRLRKYFEEVVLLEQKYVVNDSTNIKSVLNDLS 405
Query: 667 K 669
K
Sbjct: 406 K 406
>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +3
Query: 411 QTKDDVSC*GRPKSSRHFQSRHNQADRMAPSAAQESVKNV*-GKPKRHGGG-PTQGSETK 584
Q ++D+ + S + ++ PS ESV+ + GK H G P + ETK
Sbjct: 1084 QREEDLKKEDKKTSEKRPKTNDETLSESGPSNQGESVEMIKAGKGTAHSAGQPNKDDETK 1143
Query: 585 QNGSHSTRSR 614
N HS ++
Sbjct: 1144 MNAGHSAAAQ 1153
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 727 DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKP 837
+P GV I +N+P + L A+ GNT ++KP
Sbjct: 158 EPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKP 194
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 763 NYPLQLLLLPMAGAIAAGNTVIVKPXRTIS 852
NYPL + +A A+AAG T ++KP S
Sbjct: 183 NYPLLMATWKVAPALAAGCTAVLKPSELAS 212
>09_06_0240 + 21797458-21799369,21799636-21799784
Length = 686
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 436 EAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKD 573
E KA D RGT E Q+LKN R +NV++E + D
Sbjct: 513 ELFNKAEDNMERGTEMWEEMEEQRLKN--RSKPSQENVVLEKMGLD 556
>09_04_0272 -
16278136-16278289,16278873-16278970,16279090-16279230,
16279701-16279865,16279941-16280117,16280330-16280510,
16280784-16280829,16281178-16281241,16281331-16281353,
16281964-16282036,16282410-16282541,16283343-16283429,
16283488-16283700
Length = 517
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 727 DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVK 834
+P GVV VI A+N+P +L A+ GN V+ K
Sbjct: 179 NPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 214
>07_03_0204 -
15150854-15151147,15152230-15153689,15154055-15154266,
15155123-15155275,15155569-15155630,15155733-15155785,
15156380-15156452,15156499-15156619,15156699-15156878,
15157333-15157391
Length = 888
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +3
Query: 375 KIQDDSRESYNIQTKDDVSC*GRPKSSRH-FQSRHNQADRMAPSAAQESVKNV*GKPKRH 551
K DS+ES + D S R S H + ++ + PS +KNV K+H
Sbjct: 362 KHSSDSKESEVLDEGSDGSSSERGSSHGHKSHKKGKRSGKKKPSVVV--IKNVNVTSKKH 419
Query: 552 GGGPTQGSETKQNGSHST 605
G ++ + ++GS +
Sbjct: 420 GSSESESQSSSEDGSQDS 437
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,236,228
Number of Sequences: 37544
Number of extensions: 462131
Number of successful extensions: 1134
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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