Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_G01
(874 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 4e-22
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 48 8e-06
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 9e-04
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 40 0.002
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 40 0.003
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 38 0.008
SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 38 0.011
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 37 0.025
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 36 0.057
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 34 0.13
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_18027| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077) 31 1.2
SB_38362| Best HMM Match : BRCT (HMM E-Value=0) 31 1.2
SB_5253| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_2980| Best HMM Match : DUF814 (HMM E-Value=2.10195e-44) 28 8.7
SB_42867| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 102 bits (244), Expect = 4e-22
Identities = 46/117 (39%), Positives = 71/117 (60%)
Frame = +1
Query: 517 LLRMYEENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFV 696
++++ +++++ +V AL KDL + + E ++ E+ ND L L EW KP+ G V
Sbjct: 1 MVQLLDKHEDEIVAALKKDLCKPRQETVIAEILLAKNDAILALEKLSEWMKPQPVETGIV 60
Query: 697 NILDEVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPXRTISRLLEL 867
N +D I N+P GV L+I AWNYP+QL+ LP+ GAIA GN ++KP S +L
Sbjct: 61 NKMDTCYIKNEPLGVALIISAWNYPVQLIFLPLVGAIAGGNCAVLKPSEVASATAQL 117
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 49.2 bits (112), Expect = 4e-06
Identities = 42/155 (27%), Positives = 72/155 (46%)
Frame = +1
Query: 403 TTSKQKTMSAAEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRR 582
+T++ +T +AV+ AR F + P R + L ++ R +++ ++ D +
Sbjct: 672 STTQGETQDIEDAVKAARTAFQSWSKLPGHARARHLYSIARHVQKHARLIAVLESMDNGK 731
Query: 583 SKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLVIGAW 762
S E ++ N R+ H+ G+ ++D + P GVV I W
Sbjct: 732 SVRETRDCDIP---NVARHLYHHA-----------GWAQLMDTEMQGWKPVGVVGGIVPW 777
Query: 763 NYPLQLLLLPMAGAIAAGNTVIVKPXRTISRLLEL 867
N+PL LL + A+A GNTV++KP T +RL L
Sbjct: 778 NFPLMLLCWKVCPALAMGNTVVLKPA-TYTRLSAL 811
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 48.4 bits (110), Expect = 8e-06
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +1
Query: 727 DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKP 837
+P GVV IGAWNYP+Q +A AIA GNT++ KP
Sbjct: 409 EPLGVVGGIGAWNYPIQTACWKIAPAIACGNTIVYKP 445
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 41.5 bits (93), Expect = 9e-04
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +1
Query: 724 NDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKP 837
++P G+V I WN+PL + + +A A+A GN VI+KP
Sbjct: 465 HEPVGLVGAITPWNFPLNMASVKIAPALACGNVVILKP 502
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +1
Query: 697 NILDEVVIYN----DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPXRTIS 852
N L+ + N P GV +I WN PL LL +A A+A+G TV+ KP S
Sbjct: 131 NFLESQAVVNYSLRSPKGVAGLISPWNLPLYLLSFKIAPAVASGCTVVCKPSEMTS 186
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 39.9 bits (89), Expect = 0.003
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +1
Query: 709 EVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKP 837
+V+I +P GV I WN+P+ +L+ + AIA G T+I +P
Sbjct: 74 KVLITKEPVGVCASITPWNFPIAMLVRKASSAIACGCTMIARP 116
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 38.3 bits (85), Expect = 0.008
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +1
Query: 724 NDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKP 837
++P GVV I WN+PL + L +A A+A G VI+KP
Sbjct: 1335 HEPVGVVGAITPWNFPLLMEGLKLAPALACGCVVILKP 1372
>SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14)
Length = 266
Score = 37.9 bits (84), Expect = 0.011
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 5/141 (3%)
Frame = +1
Query: 430 AAEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLE 609
A A ++A D +P+E R++ L N + E+N ++ E D +S + A ++
Sbjct: 86 AVMAARQAFDDSPWSRIKPVE-RQKLLWNFADLIEKNAALLAEIESIDNGKSAVIAEHVD 144
Query: 610 VDYLINDLRNTLHYLDEWTKPE-HPPKGFVNILDEVVIYN----DPYGVVLVIGAWNYPL 774
+ ++ LR + TK E + V + + + + GVV I AWN+PL
Sbjct: 145 IRLAVDFLRYMAGFA---TKIEGRTVQVSVPFMPDAQFHGYTRREAVGVVGAIVAWNFPL 201
Query: 775 QLLLLPMAGAIAAGNTVIVKP 837
L + A+A G T ++KP
Sbjct: 202 LLACWKLGPALATGCTTVLKP 222
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 36.7 bits (81), Expect = 0.025
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 709 EVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPXRTI 849
E+ +P GVV +I WN+P +A A+A GN ++ KP +
Sbjct: 134 EIETRREPVGVVGIITPWNFPTATGAWKIAPALAFGNAIVWKPANQV 180
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 35.5 bits (78), Expect = 0.057
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 742 VLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKP 837
+L WN+PL ++ A A+AAG TVI+KP
Sbjct: 143 LLTTEQWNFPLGMITRKAAAALAAGCTVIIKP 174
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 736 GVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKP 837
GVV +I +W+ L +L + A+A+GN V++KP
Sbjct: 153 GVVAIITSWSQALPSILRHLVPAMASGNCVVIKP 186
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 33.9 bits (74), Expect = 0.17
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +1
Query: 436 EAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRRS-----KMEAI 600
+ A DT +RG +E ++Q+ +L YEE + E L + + R+ K E
Sbjct: 134 DVADDASDTSSRGPYPAVEAIQEQMSSLQANYEEEIQTVKEQLQEQMLRANEAVEKYEQQ 193
Query: 601 LLEVDYLINDLRNTLHYLDEWTKPEH 678
+ +N+L+NT E + EH
Sbjct: 194 EYQFHENLNELKNTFAQEQEMMREEH 219
>SB_18027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 31.5 bits (68), Expect = 0.93
Identities = 24/107 (22%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +1
Query: 397 NLTTSKQKTMSAAEAVQKARDTFNR--GTTRPIEWRRQQLKNLLRMYEENQNVMVEALHK 570
N + +K+ ++A + ++ N+ GT IE++R+ L+ E +N+ A K
Sbjct: 53 NASKNKRTALNALKRKKRLEKQLNQIDGTLSTIEFQREALEGANTNTEVLKNMSYAA--K 110
Query: 571 DLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDE 711
L+ + + + +V +++D++ DE ++ P GF +DE
Sbjct: 111 ALKAAHQQLDVDDVHDMMDDIQEQTELADEISRAISEPAGFGMDIDE 157
>SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077)
Length = 599
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 403 TTSKQKTMSAAEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRR 582
TT ++T+ E K + F +G +E RRQ L++ L+ +E + A + +R
Sbjct: 81 TTDDKRTIFTFE--DKRKQNFEKGRLE-LEKRRQDLQDKLKREKEEREAKERAEEERRQR 137
Query: 583 SKMEA 597
+KMEA
Sbjct: 138 AKMEA 142
>SB_38362| Best HMM Match : BRCT (HMM E-Value=0)
Length = 1572
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 861 EQATDSSXGFHDNRVPGSDGSGHRQKQQ 778
E+ DS +NR PG+DG G R K Q
Sbjct: 468 EETDDSFPSLKENREPGADGKGKRSKTQ 495
>SB_5253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 526 MYEENQNVMVEALHKDLRRSK--MEAILLEVDYLINDLRNTLHYLDEWTKPEHPPK 687
+Y E + KDL S + ++++ YL ++ + + DEW K E PPK
Sbjct: 68 LYAERLRLKPTTSSKDLSSSDVFLISVMVASKYLYDEGEDEEVFNDEWAKAEDPPK 123
>SB_2980| Best HMM Match : DUF814 (HMM E-Value=2.10195e-44)
Length = 950
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = +3
Query: 735 RRGPRNRRLELSLAAAAFADGRSH 806
++GP+ R+++ L+ +A+A+ RSH
Sbjct: 145 KKGPKGVRVDIDLSLSAYANARSH 168
>SB_42867| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 870
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +1
Query: 58 LCRLCGSCSVRNHCLIHSLYTLCKQL--MYISAC 153
LCR C +C R ++H +Y + + M++S C
Sbjct: 324 LCRQCATCLCRYVAIVHHVYVVMSPVCTMFMSLC 357
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,897,064
Number of Sequences: 59808
Number of extensions: 534018
Number of successful extensions: 1518
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1518
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2503194881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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