Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_F23
(349 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14; Eukaryota|... 89 3e-17
UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33; Eukary... 83 2e-15
UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep: LO... 80 9e-15
UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24; Eukary... 75 3e-13
UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core eu... 68 4e-11
UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep: Pr... 67 7e-11
UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S riboso... 61 4e-09
UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of s... 53 2e-06
UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1; ... 52 4e-06
UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9; T... 52 4e-06
UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 48 4e-05
UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of str... 48 4e-05
UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8; Fungi/M... 46 1e-04
UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=... 44 5e-04
UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative; ... 43 0.002
UniRef50_UPI00015B5E90 Cluster: PREDICTED: similar to AT24407p; ... 36 0.15
UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1; ... 36 0.25
UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2; ... 35 0.44
UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative; ... 33 1.0
UniRef50_P51283 Cluster: Biotin carboxyl carrier protein of acet... 33 1.8
UniRef50_A5GSE8 Cluster: Permease of the major facilitator super... 32 2.4
UniRef50_P93679 Cluster: Ribosomal protein; n=1; Oryza sativa|Re... 32 3.1
UniRef50_Q5X081 Cluster: Putative uncharacterized protein; n=4; ... 31 4.1
UniRef50_Q55AU9 Cluster: Putative uncharacterized protein; n=2; ... 31 7.2
UniRef50_Q9YFR9 Cluster: 50S ribosomal protein L38E; n=1; Aeropy... 30 9.5
UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11; Eurya... 30 9.5
>UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14;
Eukaryota|Rep: Ribosomal protein L38 - Spodoptera
frugiperda (Fall armyworm)
Length = 70
Score = 88.6 bits (210), Expect = 3e-17
Identities = 45/62 (72%), Positives = 48/62 (77%)
Frame = +2
Query: 86 KTF*LRRGGKTPNRSK*RRTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKE 265
K F L+ K K ++ NVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKE
Sbjct: 9 KDFLLKARRKDAKSVKIKKNQQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKE 68
Query: 266 VK 271
VK
Sbjct: 69 VK 70
Score = 58.8 bits (136), Expect = 2e-08
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 61 MPREIKDIKDFLIKARRKDAKSVKIKKN 144
MPREIKDIKDFL+KARRKDAKSVKIKKN
Sbjct: 1 MPREIKDIKDFLLKARRKDAKSVKIKKN 28
>UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33;
Eukaryota|Rep: 60S ribosomal protein L38 - Homo sapiens
(Human)
Length = 70
Score = 82.6 bits (195), Expect = 2e-15
Identities = 42/62 (67%), Positives = 46/62 (74%)
Frame = +2
Query: 86 KTF*LRRGGKTPNRSK*RRTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKE 265
K F L K K ++ NVKFKVRCSR+LYTLVITDKEKAEKLKQSLPPGL VKE
Sbjct: 9 KDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGLAVKE 68
Query: 266 VK 271
+K
Sbjct: 69 LK 70
Score = 51.6 bits (118), Expect = 4e-06
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +1
Query: 61 MPREIKDIKDFLIKARRKDAKSVKIKKN 144
MPR+I++IKDFL+ ARRKDAKSVKIKKN
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKN 28
>UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep:
LOC548667 protein - Xenopus tropicalis (Western clawed
frog) (Silurana tropicalis)
Length = 419
Score = 80.2 bits (189), Expect = 9e-15
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +2
Query: 131 K*RRTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEVK 271
K ++ NVKFKVRCS++LYTLVITDKEKAEKLKQSLPPGL VKE+K
Sbjct: 373 KIKKNKDNVKFKVRCSKYLYTLVITDKEKAEKLKQSLPPGLSVKELK 419
>UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24;
Eukaryota|Rep: 60S ribosomal protein L38 -
Caenorhabditis elegans
Length = 70
Score = 75.4 bits (177), Expect = 3e-13
Identities = 35/62 (56%), Positives = 45/62 (72%)
Frame = +2
Query: 86 KTF*LRRGGKTPNRSK*RRTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKE 265
K F ++ K K ++ N KFKVRC+ +LYTLV+ DK+KAEKLKQSLPPG+QVKE
Sbjct: 9 KDFLVKARRKDAKSVKIKKNSNNTKFKVRCASYLYTLVVADKDKAEKLKQSLPPGIQVKE 68
Query: 266 VK 271
+K
Sbjct: 69 LK 70
Score = 56.4 bits (130), Expect = 1e-07
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +1
Query: 61 MPREIKDIKDFLIKARRKDAKSVKIKKN 144
MP+EIK+IKDFL+KARRKDAKSVKIKKN
Sbjct: 1 MPKEIKEIKDFLVKARRKDAKSVKIKKN 28
>UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core
eudicotyledons|Rep: 60S ribosomal protein L38 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 69
Score = 68.1 bits (159), Expect = 4e-11
Identities = 34/61 (55%), Positives = 43/61 (70%)
Frame = +2
Query: 86 KTF*LRRGGKTPNRSK*RRTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKE 265
K F L K K +R+ VKFKVRCSR+LYTL + D+EKA+KLKQSLPPGL V++
Sbjct: 9 KDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSLPPGLSVQD 68
Query: 266 V 268
+
Sbjct: 69 L 69
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/28 (67%), Positives = 26/28 (92%)
Frame = +1
Query: 61 MPREIKDIKDFLIKARRKDAKSVKIKKN 144
MP++I +IKDFL+ ARRKDA+SVKIK++
Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRS 28
>UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 79
Score = 67.3 bits (157), Expect = 7e-11
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = +2
Query: 101 RRGGKTPNRSK*RRTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 268
RR + R K R +KFKVRC RFLYTLV+ D +KA+KLKQSLPP L++ +V
Sbjct: 16 RRKDASSARIKRNRKTSQIKFKVRCQRFLYTLVLKDSDKADKLKQSLPPSLKIADV 71
Score = 39.5 bits (88), Expect = 0.016
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +1
Query: 61 MPREIKDIKDFLIKARRKDAKSVKIKKNPXECQVQ 165
MP E+ DIK F+ RRKDA S +IK+N Q++
Sbjct: 1 MPSEVSDIKQFIEICRRKDASSARIKRNRKTSQIK 35
>UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S ribosomal
protein L38; n=1; Danio rerio|Rep: PREDICTED: similar to
60S ribosomal protein L38 - Danio rerio
Length = 154
Score = 61.3 bits (142), Expect = 4e-09
Identities = 34/61 (55%), Positives = 40/61 (65%)
Frame = +2
Query: 86 KTF*LRRGGKTPNRSK*RRTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKE 265
K F L K K ++ NVKFKVRCSR LYTLVITDKEKAEKLKQ L +Q++
Sbjct: 25 KDFLLTAKRKDAKSVKIKKNKDNVKFKVRCSRHLYTLVITDKEKAEKLKQ-LKKAVQIQR 83
Query: 266 V 268
+
Sbjct: 84 L 84
Score = 50.8 bits (116), Expect = 6e-06
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +1
Query: 61 MPREIKDIKDFLIKARRKDAKSVKIKKN 144
+PREI++IKDFL+ A+RKDAKSVKIKKN
Sbjct: 17 LPREIEEIKDFLLTAKRKDAKSVKIKKN 44
>UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 78
Score = 52.8 bits (121), Expect = 2e-06
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +2
Query: 140 RTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 268
+ + KFKVR SR+ YTLV+ D KA+KL+QSLPP L++K +
Sbjct: 36 KKIKQTKFKVRGSRYQYTLVVNDAAKAKKLQQSLPPTLEIKNL 78
Score = 36.3 bits (80), Expect = 0.15
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +1
Query: 61 MPREIKDIKDFLIKARRKDAKSVKIKKN 144
M REIKDIK+F+ ARR D KS +K N
Sbjct: 1 MAREIKDIKEFVELARRSDIKSAVVKVN 28
>UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L38 - Entamoeba histolytica HM-1:IMSS
Length = 77
Score = 51.6 bits (118), Expect = 4e-06
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +2
Query: 152 NVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 268
N KFKVRC+++LYT + DK KAE+LK+++P + V E+
Sbjct: 31 NTKFKVRCAKYLYTYICADKAKAEELKKAIPKDIHVVEI 69
>UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9;
Trypanosomatidae|Rep: Ribosomal protein L38, putative -
Leishmania major
Length = 83
Score = 51.6 bits (118), Expect = 4e-06
Identities = 20/33 (60%), Positives = 30/33 (90%)
Frame = +2
Query: 158 KFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 256
KFKVRCSR+LYTLV+ DK+KA+K+++S+ P ++
Sbjct: 33 KFKVRCSRYLYTLVVNDKKKADKIERSIHPSVK 65
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +1
Query: 61 MPREIKDIKDFLIKARRKDAKSVKIKKNP 147
MPREIK +K+FL RKDA+ VK+K NP
Sbjct: 1 MPREIKTLKEFLAICSRKDARCVKVKHNP 29
>UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome C of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Saccharomycetales|Rep: Kluyveromyces lactis
strain NRRL Y-1140 chromosome C of strain NRRL Y- 1140
of Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 78
Score = 48.0 bits (109), Expect = 4e-05
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +2
Query: 140 RTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 268
+ KFK+R SR+LYTL++ D KA+KL QSLPP V ++
Sbjct: 36 KAFRQTKFKLRGSRYLYTLIVNDAGKAKKLLQSLPPTFNVNKL 78
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 61 MPREIKDIKDFLIKARRKDAKSVKIKKN 144
M +EI DIK+FL RR+D S +K N
Sbjct: 1 MAKEIADIKEFLELIRRQDVNSATVKIN 28
>UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 84
Score = 48.0 bits (109), Expect = 4e-05
Identities = 18/39 (46%), Positives = 29/39 (74%)
Frame = +2
Query: 152 NVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 268
+ KFK+RC R LYTL + D+ KA+K+ QSLP +++ ++
Sbjct: 44 DTKFKIRCPRMLYTLTVDDRTKADKIVQSLPSSIKIIKI 82
>UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8;
Fungi/Metazoa group|Rep: 60S ribosomal protein L38 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 78
Score = 46.4 bits (105), Expect = 1e-04
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +2
Query: 158 KFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 268
KFKVR S LYTLVI D KA+KL QSLPP L+V +
Sbjct: 42 KFKVRGSSSLYTLVINDAGKAKKLIQSLPPTLKVNRL 78
Score = 31.5 bits (68), Expect = 4.1
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 61 MPREIKDIKDFLIKARRKDAKSVKIKKN 144
M REI DIK FL RR D K+ +K N
Sbjct: 1 MAREITDIKQFLELTRRADVKTATVKIN 28
>UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L38, putative -
Theileria annulata
Length = 79
Score = 44.4 bits (100), Expect = 5e-04
Identities = 19/48 (39%), Positives = 32/48 (66%)
Frame = +2
Query: 125 RSK*RRTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 268
+ K + L + KFKVRCSR+LYT + ++ KA K++ ++P L+ K +
Sbjct: 27 KKKSKGGLLSTKFKVRCSRYLYTFSVPNQVKAAKVEATIPSNLEKKVI 74
Score = 37.1 bits (82), Expect = 0.083
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 61 MPREIKDIKDFLIKARRKDAKSVKIKKNPXECQVQGSMLKV 183
MP+E+KD+KD+L +R DAKSV + K + + + KV
Sbjct: 1 MPKELKDLKDYLNVLKRPDAKSVVVYKKKSKGGLLSTKFKV 41
>UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative;
n=4; Plasmodium|Rep: 60S ribosomal protein L38-1,
putative - Plasmodium vivax
Length = 93
Score = 42.7 bits (96), Expect = 0.002
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +2
Query: 125 RSK*RRTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 256
+SK ++ K K+R ++LYT+V DK+KAE+++ SL P L+
Sbjct: 29 KSKTKKNTIITKLKLRTKKYLYTMVFADKKKAERIENSLLPSLK 72
>UniRef50_UPI00015B5E90 Cluster: PREDICTED: similar to AT24407p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
AT24407p - Nasonia vitripennis
Length = 418
Score = 36.3 bits (80), Expect = 0.15
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +2
Query: 20 DPLTVLVENYSSSTCRVKSKISKTF*LRRGGKTPNRSK*RRTLXNVKFKV------RCSR 181
D L L EN+ S ++ +KI L + KT N +T+ ++V R
Sbjct: 39 DNLIALGENFGSKILKIDAKIQ----LSKNSKTENLYMIVKTVMETDYEVDWTTLLRKEI 94
Query: 182 FLYTLVITDKEKAEKLKQSLPPGLQVKEV 268
F+YT +IT EK E +++ L GL++K +
Sbjct: 95 FMYTYIITQYEKIE-VQRGLKRGLEIKSI 122
>UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L38e,
putative - Trichomonas vaginalis G3
Length = 98
Score = 35.5 bits (78), Expect = 0.25
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 49 FVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPXE 153
F +MP+++ K+FL A R DAK VK+KK+ E
Sbjct: 21 FFTSMPKQVTTPKEFLALAARSDAKWVKVKKSSDE 55
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 152 NVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQV 259
N KFK+R +++LYTL + K E ++ S+P L+V
Sbjct: 56 NTKFKLRTTKYLYTLTVKPK-FVELVQNSIPESLEV 90
>UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 162
Score = 34.7 bits (76), Expect = 0.44
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +3
Query: 144 PXRMSSSRFDAQGSCTPWSSLTKRRLRNLSR 236
P SSR DA +CTP S+T RRLR+ SR
Sbjct: 109 PPTSPSSRSDAPSTCTPLFSMTLRRLRSSSR 139
>UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative;
n=4; Trichomonas vaginalis G3|Rep: 60S ribosomal protein
L38-2, putative - Trichomonas vaginalis G3
Length = 74
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +2
Query: 158 KFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQV 259
KFK+R ++FLYTLV+ K E ++ S+P L+V
Sbjct: 34 KFKLRTTKFLYTLVVKPK-FVELVQNSIPESLEV 66
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 61 MPREIKDIKDFLIKARRKDAKSVKIKK 141
MP+++ K+FL A R DAK VK+KK
Sbjct: 1 MPKQVATPKEFLALAARPDAKWVKVKK 27
>UniRef50_P51283 Cluster: Biotin carboxyl carrier protein of
acetyl-CoA carboxylase; n=2; Rhodophyta|Rep: Biotin
carboxyl carrier protein of acetyl-CoA carboxylase -
Porphyra purpurea
Length = 157
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 73 IKDIKDFLIKARRKDAKSVKIKKNPXECQVQGSMLKVP 186
IKD++D L +RK +++K+KKN E + KVP
Sbjct: 5 IKDLQDLLSSVQRKKIQTLKLKKNKFELILNKPSKKVP 42
>UniRef50_A5GSE8 Cluster: Permease of the major facilitator
superfamily; n=1; Synechococcus sp. RCC307|Rep: Permease
of the major facilitator superfamily - Synechococcus sp.
(strain RCC307)
Length = 522
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = -2
Query: 264 SLTWRPGGKLCLSFSAFSLSVMT---RVYRNLEHRTLNLTFX--RVLLYFDRFGVFPPRL 100
++ W +C F FS S++ + + + LTF V+L+F RF PP L
Sbjct: 200 AIDWLTFYLICAGFGIFSCSLVVGNQQEWFQSSFYIILLTFSLIHVILFFIRFASSPPLL 259
Query: 99 N*KVFDIFDF 70
N KVF +F
Sbjct: 260 NPKVFSDINF 269
>UniRef50_P93679 Cluster: Ribosomal protein; n=1; Oryza sativa|Rep:
Ribosomal protein - Oryza sativa (Rice)
Length = 79
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 61 MPREIKDIKDFLIKARRKDAKSVKIKKNPXECQVQGSMLKVPVHPGHH*QREG 219
MP++I +IK + + +++ QVQG++L+VP+HP +R+G
Sbjct: 1 MPKQIHEIKGLPPDGEEEGREVGADQEDQGRRQVQGALLQVPLHPLRLRRRQG 53
>UniRef50_Q5X081 Cluster: Putative uncharacterized protein; n=4;
Legionella pneumophila|Rep: Putative uncharacterized
protein - Legionella pneumophila (strain Lens)
Length = 445
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 146 LXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 268
+ N+++ V C R YTL D E++K+ L L++ E+
Sbjct: 49 ILNIEYSVLCQRLKYTLSSLDYSSPEQIKEQLIDALKLAEL 89
>UniRef50_Q55AU9 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 761
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 111 ERRQIGQNKEEPXRMSSSRFDAQGSCTPWSSLTKRRLRNLSRVYL 245
E R QN EEP + +S+RFDA S W ++ K+ + R+++
Sbjct: 244 EIRPYLQNTEEPPQCASTRFDASNS---WDAIEKQIIEGQIRLHI 285
>UniRef50_Q9YFR9 Cluster: 50S ribosomal protein L38E; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L38E - Aeropyrum
pernix
Length = 67
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 155 VKFKVRCSRFLYTLVITDKEKAEKLKQ 235
VK K R R+LYTL + +++AE L+Q
Sbjct: 30 VKIKARTKRYLYTLKVPPEKEAEVLEQ 56
>UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 93
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 67 REIKDIKDFLIKARRKDAKSVKIKKNPXECQVQGSMLKVPV 189
R +K+++ FL++ + +A+ VK+ K EC + K P+
Sbjct: 33 RAVKEVRGFLVRHMKTEAEQVKLDKTINECLWEKGCEKPPL 73
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,576,507
Number of Sequences: 1657284
Number of extensions: 4080093
Number of successful extensions: 10594
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 10381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10591
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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