Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_F21
(801 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A1Z9A8 Cluster: Protein PTCD3 homolog, mitochondrial pr... 158 2e-37
UniRef50_UPI00015B55B9 Cluster: PREDICTED: similar to ENSANGP000... 129 7e-29
UniRef50_UPI000051A485 Cluster: PREDICTED: similar to CG4679-PA;... 105 1e-21
UniRef50_Q9N584 Cluster: Putative uncharacterized protein; n=2; ... 81 4e-14
UniRef50_UPI0000ECC673 Cluster: Pentatricopeptide repeat domain ... 78 3e-13
UniRef50_Q4SFA7 Cluster: Chromosome undetermined SCAF14606, whol... 69 1e-10
UniRef50_UPI0000E466F5 Cluster: PREDICTED: similar to Pentatrico... 66 7e-10
UniRef50_Q96EY7 Cluster: Pentatricopeptide repeat-containing pro... 64 5e-09
UniRef50_Q32LU7 Cluster: Pentatricopeptide repeat-containing pro... 51 3e-05
UniRef50_A7SHG0 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.073
UniRef50_Q9U5M2 Cluster: FCR3 CSA ligand; n=106; Plasmodium falc... 36 1.6
UniRef50_Q3JBH0 Cluster: KaiC; n=2; Chromatiales|Rep: KaiC - Nit... 35 2.1
UniRef50_Q8I3F4 Cluster: Putative uncharacterized protein PFE157... 34 4.8
UniRef50_Q0UKS9 Cluster: Putative uncharacterized protein; n=1; ... 34 4.8
UniRef50_A5E140 Cluster: Putative uncharacterized protein; n=1; ... 34 4.8
UniRef50_A7E927 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
>UniRef50_A1Z9A8 Cluster: Protein PTCD3 homolog, mitochondrial
precursor; n=4; Endopterygota|Rep: Protein PTCD3
homolog, mitochondrial precursor - Drosophila
melanogaster (Fruit fly)
Length = 652
Score = 158 bits (383), Expect = 2e-37
Identities = 89/218 (40%), Positives = 120/218 (55%), Gaps = 3/218 (1%)
Frame = +3
Query: 156 RQISKIKCLCRSLVSIESQKTPQSGASSDGISPPVRIQRGPTDILQALSTTVGIDPTAAH 335
R + + C SL S + T + A I P RI+R PTD+LQAL++TV D TA H
Sbjct: 8 RLLPRANIAC-SLSSSGAHYTTAAPAEDAPIEIPNRIERSPTDLLQALASTVARDYTAPH 66
Query: 336 YKYHDDPYLIPLSNYRKRAYALAAEAGRKAAIWIRDEHADLFTTRIWDPPLRKKTPYYNA 515
YKYHDDP+LIP+SN KR YA++ E+GRKAA WI++EH +LF + A
Sbjct: 67 YKYHDDPFLIPMSNAAKRTYAMSKESGRKAAKWIKEEHRELFM-------------HQEA 113
Query: 516 DPKIEAFSPKPIYNDESKVTEEDLIYTIRNALIEDSIKVYQLL-GGSQGVSDEXXXXXXX 692
P IE F+P +Y ++S V E L I ++D++ VY LL +S E
Sbjct: 114 QPAIEKFAPSMVYTEDSVVDETSLAQLISQGELKDAVLVYNLLEQKGNPISPELKQSLLE 173
Query: 693 XXCFYNEKEPDSVEWLEERWFSANT--XERQAATWRLG 800
CF+N +EP E++EERWF N ER TW+ G
Sbjct: 174 LVCFHNNQEPIPEEYIEERWFLQNNKRRERSGKTWKDG 211
>UniRef50_UPI00015B55B9 Cluster: PREDICTED: similar to
ENSANGP00000014396; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000014396 - Nasonia
vitripennis
Length = 658
Score = 129 bits (312), Expect = 7e-29
Identities = 84/219 (38%), Positives = 113/219 (51%)
Frame = +3
Query: 135 YSNIVITRQISKIKCLCRSLVSIESQKTPQSGASSDGISPPVRIQRGPTDILQALSTTVG 314
+ N +I R+I + L+ + T S SS I P+R +RGPTDIL+AL TT+
Sbjct: 4 FRNKIIDRRIPR-----NILLQFQKLATTASVNSSSEIQVPIRKERGPTDILEALETTIS 58
Query: 315 IDPTAAHYKYHDDPYLIPLSNYRKRAYALAAEAGRKAAIWIRDEHADLFTTRIWDPPLRK 494
DPTAA YK+ DDP+LIP S +KR Y+LA E+G+KAA+WI EHADL + +
Sbjct: 59 RDPTAADYKFIDDPFLIPTSLSKKRMYSLARESGKKAAMWILQEHADLLKSDL------- 111
Query: 495 KTPYYNADPKIEAFSPKPIYNDESKVTEEDLIYTIRNALIEDSIKVYQLLGGSQGVSDEX 674
+ P ++AF P Y + +V+E+ L I+ A I D + VYQLL G V+ E
Sbjct: 112 ------SQPLVQAFLPVNQYKTKEQVSEQILNDLIKQARIADVLHVYQLLEGE--VTKET 163
Query: 675 XXXXXXXXCFYNEKEPDSVEWLEERWFSANTXERQAATW 791
CFYN E L E E TW
Sbjct: 164 KQAILEMLCFYNSNTELIPEELPEERSYQPEAEVFKNTW 202
>UniRef50_UPI000051A485 Cluster: PREDICTED: similar to CG4679-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG4679-PA
- Apis mellifera
Length = 379
Score = 105 bits (252), Expect = 1e-21
Identities = 60/165 (36%), Positives = 91/165 (55%), Gaps = 4/165 (2%)
Frame = +3
Query: 162 ISKIKCLCRSLVSIESQKTPQS-GASSDGISPPVRIQRGPTDILQALSTTVGIDPTA--- 329
++ KC+ E ++ S S+ I P RI+R TDIL AL +T+ D
Sbjct: 1 MNHFKCILDRTSQCELRRLQSSLSISNSKIQIPARIKRNSTDILHALESTLPKDSNMHII 60
Query: 330 AHYKYHDDPYLIPLSNYRKRAYALAAEAGRKAAIWIRDEHADLFTTRIWDPPLRKKTPYY 509
++ YHDDPYL+P+ R +AL+ E+GRKAA+WI EH DLF P +
Sbjct: 61 KNFMYHDDPYLLPIKKLDYRRFALSYESGRKAAMWIHREHGDLF-------------PKH 107
Query: 510 NADPKIEAFSPKPIYNDESKVTEEDLIYTIRNALIEDSIKVYQLL 644
++P+I+AF P P Y D+++V+EE L+ I + D++ +Y LL
Sbjct: 108 LSNPEIKAFKPFPKYTDKNQVSEEILLNVISQCKVSDALHIYNLL 152
>UniRef50_Q9N584 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 660
Score = 80.6 bits (190), Expect = 4e-14
Identities = 64/210 (30%), Positives = 95/210 (45%), Gaps = 1/210 (0%)
Frame = +3
Query: 174 KCLCRSLVSIESQKTPQSGASSDGISPPVRIQRGPTDILQALSTTVGIDPTAAHYKYHDD 353
+ + RSL S+E A S ++ I+R PTD+L ALS TVG D TA H+ Y DD
Sbjct: 5 RVITRSLSSVEP-------ALSQKLTIQPAIERSPTDLLNALSETVGPDTTAPHFAYIDD 57
Query: 354 PYLIPLSNYRKRAYALAAEAGRKAAIWIRDEHADLFTTRIWDPPLRKKTPYYNADPKIEA 533
P IP + K+ Y +A E G++AA + E LF P L P + ADP
Sbjct: 58 PITIPSTQSTKKTYFMAKEFGKRAARELATEWPTLFAFDRDQPQLPVFRPRHLADPL--- 114
Query: 534 FSPKPIYNDESKVTEEDLIYTIRNALIEDSIKVYQLLGGSQ-GVSDEXXXXXXXXXCFYN 710
+ + TE +L+ I + ++DS +Y+ + VS++ +YN
Sbjct: 115 ---------QVEPTENNLLKMISSREVKDSCILYERMRSENVDVSEKVQLELFRLVTYYN 165
Query: 711 EKEPDSVEWLEERWFSANTXERQAATWRLG 800
EW EE N E ++W+ G
Sbjct: 166 SSNVPFAEW-EEFVGMRNFGEDSTSSWKSG 194
>UniRef50_UPI0000ECC673 Cluster: Pentatricopeptide repeat domain 3;
n=2; Gallus gallus|Rep: Pentatricopeptide repeat domain
3 - Gallus gallus
Length = 626
Score = 77.8 bits (183), Expect = 3e-13
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 1/167 (0%)
Frame = +3
Query: 285 ILQALSTTVGIDPTAAHYKYHDDPYLIPLSNYRKRAYALAAEAGRKAAIWIRDEHADLFT 464
+LQ L++TV DPTAAHY +HDDPYL+P ++ R ++L+ E+GR AA +I E F
Sbjct: 16 VLQTLASTVKRDPTAAHYMFHDDPYLMPKNSATARLFSLSKESGRNAAKYIIKEFPHFFD 75
Query: 465 TRIWDPPLRKKTPYYNADPKIEAFSPKPIYNDESKVTEEDLIYTIRNALIEDSIKVY-QL 641
+ +P + P P+IE V+EE L I +++ S+ ++ QL
Sbjct: 76 KILAEPNIPSLMPEI-CTPQIEG------------VSEEALRERINLRMVKASVDLFDQL 122
Query: 642 LGGSQGVSDEXXXXXXXXXCFYNEKEPDSVEWLEERWFSANTXERQA 782
L +S E CFY + E + EE+ + E+++
Sbjct: 123 LQAGTSISLETTNSLLDLLCFYGDGESTQEKESEEKEDLEESEEKES 169
>UniRef50_Q4SFA7 Cluster: Chromosome undetermined SCAF14606, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14606, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 638
Score = 69.3 bits (162), Expect = 1e-10
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Frame = +3
Query: 231 ASSDGISPPVRIQRGPTDILQALSTTVGIDPTAAHYKYHDDPYLIPLSNYRKRAYALAAE 410
AS++ ++ P + +L+AL+ TV DPT+ Y++ DDPYL P ++ + Y+L+ E
Sbjct: 41 ASAEVLAIPRKKTWSKEAVLEALALTVTKDPTSYAYQFQDDPYLSPQNSAEFKLYSLSQE 100
Query: 411 AGRKAAIWIRDEHADLFTTRIWDPPLRKKTPYYNADPKIEAFSPKPIYNDESKVTEEDLI 590
+GR AA + + FT A+P I P+ + + +V+EE L
Sbjct: 101 SGRSAAKYFVNTFPKFFTKDF-------------AEPHIPCLMPESVAAETEEVSEEALR 147
Query: 591 YTIRNALIEDSIKVY-QLLGGSQGVSDEXXXXXXXXXCFYNEKEP 722
++ + ++ Y QLL VS E CFY +++P
Sbjct: 148 ERVKLRKVTAAVTSYDQLLQAGVAVSKETTQELLDLLCFYGDRDP 192
>UniRef50_UPI0000E466F5 Cluster: PREDICTED: similar to
Pentatricopeptide repeat domain 3, partial; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
Pentatricopeptide repeat domain 3, partial -
Strongylocentrotus purpuratus
Length = 201
Score = 66.5 bits (155), Expect = 7e-10
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Frame = +3
Query: 285 ILQALSTTVGIDPTAAHYKYHDDPYLIPLSNYRKRAYALAAEAGRKAAIWIRDEHADLFT 464
+L+ALS TV DPTA Y + DDPYL+P S +R Y L+ +G+KAA ++ + ++F
Sbjct: 5 VLRALSQTVTKDPTALPYVFMDDPYLLPKSAAERRRYQLSKVSGKKAAQYVINSKPEVFL 64
Query: 465 TRIWDPPLRKKTPYYNADPKIEAFSPKPIYNDESKVTEEDLIYTIRNALIEDSIKVY-QL 641
D +PKIEAF P +D + +EE ++ I + ++ +++ + QL
Sbjct: 65 GLTKD------------EPKIEAFYPPVDASDVQEASEEAILERIGVSDMQGALEAHRQL 112
Query: 642 LGGSQGVSDEXXXXXXXXXCFY 707
+ VS E CF+
Sbjct: 113 VESGHHVSLEVNNTLLDFLCFH 134
>UniRef50_Q96EY7 Cluster: Pentatricopeptide repeat-containing
protein 3, mitochondrial precursor; n=22; Tetrapoda|Rep:
Pentatricopeptide repeat-containing protein 3,
mitochondrial precursor - Homo sapiens (Human)
Length = 689
Score = 63.7 bits (148), Expect = 5e-09
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Frame = +3
Query: 285 ILQALSTTVGIDPTAAHYKYHDDPYLIPLSNYRKRAYALAAEAGRKAAIWIRDEHADLFT 464
+LQAL++TV D TA Y + DDPYL+P S+ R++ LA ++G A +I + + F
Sbjct: 70 VLQALASTVNRDTTAVPYVFQDDPYLMPASSLESRSFLLAKKSGENVAKFIINSYPKYFQ 129
Query: 465 TRIWDPPLRKKTPYYNADPKIEAFSPKPIYNDESKVTEEDLIYTIRNALIEDSIKVY-QL 641
I +P + P Y +P+I+ ++E L I ++ S+ ++ QL
Sbjct: 130 KDIAEPHIPCLMPEY-FEPQIK------------DISEAALKERIELRKVKASVDMFDQL 176
Query: 642 LGGSQGVSDEXXXXXXXXXCFYNEKEPDS 728
L VS E C+Y ++EP +
Sbjct: 177 LQAGTTVSLETTNSLLDLLCYYGDQEPST 205
>UniRef50_Q32LU7 Cluster: Pentatricopeptide repeat-containing
protein 3, mitochondrial precursor; n=4; Danio
rerio|Rep: Pentatricopeptide repeat-containing protein
3, mitochondrial precursor - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 667
Score = 51.2 bits (117), Expect = 3e-05
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Frame = +3
Query: 285 ILQALSTTVGIDPTAAHYKYHDDPYLIPLSNYRKRAYALAAEAGRKAAIWIRDEHADLFT 464
+LQAL++TV DPTA+ Y+ DD +L P + + + + E+GR AA + +++ F
Sbjct: 60 VLQALASTVKRDPTASDYRLQDDSFLTPKTASDFKLFCRSQESGRNAAKYFINKYPKYF- 118
Query: 465 TRIWDPPLRKKTPYYNADPKIEAFSPKPIYNDESKVTEEDLIYTIRNALIEDSIKVY-QL 641
+ Y A P I P+ + V+E L I+ ++ ++ +Y QL
Sbjct: 119 ----------EKDY--AQPHIPCLMPETLDAQLEDVSEAALKERIQLRKVKAAVDLYDQL 166
Query: 642 LGGSQGVSDEXXXXXXXXXCFYNEKEP 722
L VS + C Y E +P
Sbjct: 167 LQAGTSVSLDLTNDLLDLICLYGEADP 193
>UniRef50_A7SHG0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 326
Score = 39.9 bits (89), Expect = 0.073
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 4/126 (3%)
Frame = +3
Query: 138 SNIVITRQISKIKCLCRSLVSIE----SQKTPQSGASSDGISPPVRIQRGPTDILQALST 305
S I R +KI LCR+ V S K + + R P +L+AL++
Sbjct: 5 SAICALRGSAKIYPLCRAAVLSRLLSGSTKNANKTLVKESTTEDEHSPRDPLAVLKALAS 64
Query: 306 TVGIDPTAAHYKYHDDPYLIPLSNYRKRAYALAAEAGRKAAIWIRDEHADLFTTRIWDPP 485
TV A + ++D L+P + ++ A +GRKAA ++ + LF R +P
Sbjct: 65 TVEPTALAPPKELYEDVLLLPRTPRKREECKAAMMSGRKAAEFVISRYPQLFPMRKPEPA 124
Query: 486 LRKKTP 503
+ P
Sbjct: 125 WPRPDP 130
>UniRef50_Q9U5M2 Cluster: FCR3 CSA ligand; n=106; Plasmodium
falciparum|Rep: FCR3 CSA ligand - Plasmodium falciparum
Length = 3542
Score = 35.5 bits (78), Expect = 1.6
Identities = 26/112 (23%), Positives = 45/112 (40%)
Frame = +3
Query: 135 YSNIVITRQISKIKCLCRSLVSIESQKTPQSGASSDGISPPVRIQRGPTDILQALSTTVG 314
Y N+ + C C S + KT Q SSD P + P + + +
Sbjct: 2399 YLNMKLKELCGNKDCSCMQKPSSQLPKTTQQSQSSDANDMPESLDYVPEEFNKCECPELS 2458
Query: 315 IDPTAAHYKYHDDPYLIPLSNYRKRAYALAAEAGRKAAIWIRDEHADLFTTR 470
+ H K +P IP++ K AY L+ EA I ++++ + +T+
Sbjct: 2459 KKGSMIHTKKITEP-KIPMNCVEKAAYYLSKEAENNMDITLKEKFIPIESTK 2509
>UniRef50_Q3JBH0 Cluster: KaiC; n=2; Chromatiales|Rep: KaiC -
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Length = 482
Score = 35.1 bits (77), Expect = 2.1
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +3
Query: 396 ALAAEAGRKAAIWIRDEHADLFTTRIWDPPLRKKTPYYNADPKIEAFSPKPIYNDE-SKV 572
A AA GRKAAI++ +E D R + K P K+E P DE + +
Sbjct: 284 AQAAAQGRKAAIYLFEEEIDALLHRASSLSIDLKNPLREGQIKLEQVEPLRYLTDEFATL 343
Query: 573 TEEDLIYTIRNALIEDSIKVYQL-LGGSQ 656
+++ ++ DSI ++L LGG +
Sbjct: 344 VSQEVEEEGVELIVLDSIAGFELTLGGDE 372
>UniRef50_Q8I3F4 Cluster: Putative uncharacterized protein PFE1570c;
n=2; Plasmodium|Rep: Putative uncharacterized protein
PFE1570c - Plasmodium falciparum (isolate 3D7)
Length = 1171
Score = 33.9 bits (74), Expect = 4.8
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = -1
Query: 240 H*RHHFVEFSDFRYLPRIDINILFLKSVS*LLYWN-TSYY*KFIGSVKII*NESRNHELL 64
H H E DF + ID N L++K S YWN + I +K + +H L
Sbjct: 224 HNHIHSDESQDFNFHDDIDRNNLWMKKYSSKKYWNFKKIKNEIIADLKFNQSTYIDHSLK 283
Query: 63 LIKHYSKKLKTINNAKSLQY 4
Y + K I+N + L+Y
Sbjct: 284 CQNEYFNESKNISNLQILKY 303
>UniRef50_Q0UKS9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 937
Score = 33.9 bits (74), Expect = 4.8
Identities = 31/115 (26%), Positives = 49/115 (42%)
Frame = +3
Query: 198 SIESQKTPQSGASSDGISPPVRIQRGPTDILQALSTTVGIDPTAAHYKYHDDPYLIPLSN 377
++ + Q+GA P RG D +AL + DP Y DP +I ++
Sbjct: 96 ALTKEVVSQAGAGQGADGEPPAHSRGSVD-QEALLEDME-DPDDRRYVLVSDPSIITPTD 153
Query: 378 YRKRAYALAAEAGRKAAIWIRDEHADLFTTRIWDPPLRKKTPYYNADPKIEAFSP 542
+R+R++ AE G A I +FT R+ TPY P+ E+ +P
Sbjct: 154 HRRRSF---AERGNMAHIKTDVADPPMFTERV-------STPYAYTKPQRESIAP 198
>UniRef50_A5E140 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 646
Score = 33.9 bits (74), Expect = 4.8
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +3
Query: 333 HYKYHDDPYLIPLSNYRKRAYALAAEAGRKAAIWIRDEHADLFTTRIW-DPPLRKKTPYY 509
HY Y P +PL Y+ L + + HA +FT IW DP R + +
Sbjct: 476 HYHYLHFPMSLPL--YKMNTKNLVMQFDPEKLYSYNKHHARVFTNDIWRDPVYRMQYRNF 533
Query: 510 NADPKIEAFSPK-PIYNDESKVTEEDLI 590
AD + K +Y+D+++ E+ L+
Sbjct: 534 VADDLSSEYGFKDTVYHDQAEDIEKQLV 561
>UniRef50_A7E927 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 2906
Score = 33.1 bits (72), Expect = 8.4
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 594 TIRNALIEDSIKVYQLLGGSQGVSDEXXXXXXXXXCFYNE-KEPDSVEWLEERWFSAN 764
+IR A++ Y+L G GV+DE NE K DS EW +E + N
Sbjct: 2615 SIRKAILSHDESSYELTRGQNGVNDETHSHGAGHVDGTNEVKNSDSQEWYKEYQYITN 2672
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,490,716
Number of Sequences: 1657284
Number of extensions: 14738972
Number of successful extensions: 36621
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 35322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36604
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68731504465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -